click chemistry

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  • 文章类型: Journal Article
    确定反应是由单一金属催化中心催化还是由包含两个这样的中心的短暂复合物协同催化,可能是一项艰巨的追求,需要详细的动力学,同位素,和其他类型的研究--如图所示,例如,通过对流行的“点击”反应的单铜与双铜机制进行了十多年的研究。本文介绍了一种通过基于纳米粒子的平台来询问这种合作机制的方法,其中催化单元的近端概率可以系统地变化,更重要的是,独立于它们的体积浓度。该方法依赖于几何考虑,而不是动力学方程的详细知识,然而,它产生的扩展趋势可以区分合作和非合作机制。
    Establishing whether a reaction is catalyzed by a single-metal catalytic center or cooperatively by a fleeting complex encompassing two such centers may be an arduous pursuit requiring detailed kinetic, isotopic, and other types of studies─as illustrated, for instance, by over a decade-long work on single-copper versus di-copper mechanisms of the popular \"click\" reaction. This paper describes a method to interrogate such cooperative mechanisms by a nanoparticle-based platform in which the probabilities of catalytic units being proximal can be varied systematically and, more importantly, independently of their volume concentration. The method relies on geometrical considerations rather than a detailed knowledge of kinetic equations, yet the scaling trends it yield can distinguish between cooperative and non-cooperative mechanisms.
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  • 文章类型: Journal Article
    报道了1,4-二苯基-1,2,3-三唑衍生物的小文库的设计和制备,目的是获得一类新的Hedgehog通路抑制剂。平滑蛋白是hedgehog信号通路的一部分,被先导化合物Vismodegib抑制。基于分子建模模拟,合成了7种Vismodegib三唑衍生物及其对不同血管内皮细胞的生物学效应,癌症,和癌症干细胞系报道。
    The design and the preparation of a small library of 1,4-diphenyl-1,2,3-triazole derivatives is reported, with the aim to obtain a new class of Hedgehog pathway inhibitors. The smoothened protein is part of the hedgehog signaling pathway that is inhibited by the lead compound Vismodegib. Based on molecular modeling simulations, seven triazole derivatives of Vismodegib are synthesized and their biological effect on different endothelial, cancer, and cancer stem cell lines is reported.
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  • 文章类型: Journal Article
    With the aim of developing a new approach to obtain improved aptamers, a cyclic thrombin-binding aptamer (TBA) analogue (cycTBA) has been prepared by exploiting a copper(I)-assisted azide-alkyne cycloaddition. The markedly increased serum resistance and exceptional thermal stability of the G-quadruplex versus TBA were associated with halved thrombin inhibition, which suggested that some flexibility in the TBA structure was necessary for protein recognition.
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  • 文章类型: Journal Article
    Radiolabeled biomolecules with short half-life times are of increasing importance for positron emission tomography (PET) imaging studies. Herein, we demonstrate an improved and generalized method for synthesizing a [radiometal]-unsaturated aldehyde as a lysine-labeling probe that can be easily conjugated into various biomolecules through the RIKEN click reaction. As a case study, 68 Ga-PET imaging of U87MG xenografted mice is demonstrated by using the 68 Ga-DOTA-RGDyK peptide, which is selective to αV β3 integrins.
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  • 文章类型: Journal Article
    A general and convenient approach for the incorporation of different types of boron clusters into specific locations of the DNA-oligonucleotide chain based on the automated phosphoramidite method of oligonucleotide synthesis and post-synthetic \"click chemistry\" modification has been developed. Pronounced effects of boron-cluster modification on the physico- and biochemical properties of the antisense oligonucleotides were observed. The silencing activity of antisense oligonucleotides bearing a single boron cluster modification in the middle of the oligonucleotide chain was substantially higher than that of unmodified oligonucleotides. This finding may be of importance for the design of therapeutic nucleic acids with improved properties. The proposed synthetic methodology broadens the availability of nucleic acid-boron cluster conjugates and opens up new avenues for their potential practical use.
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  • 文章类型: Journal Article
    源自人多能干细胞(hPSC)衍生物的三维类器官已经广泛用于体外模型中,用于研究发育和疾病。它们在体外形态发生过程中概括正常人类发育方面的能力产生了具有前所未有的仿生能力的组织结构。当前的类器官衍生方案主要依赖于在3-D球形细胞聚集体中发生的自发形态发生过程,而很少或没有外源控制。这产生了含有仿生组织的微尺度区域的类器官,但在宏观尺度(即100微米到毫米),类器官形态,细胞结构,和细胞组成是非仿生和可变的。目前在微观尺度上缺乏对体外类器官形态发生的控制,这阻碍了实现该技术的潜力,可重复地形成解剖学上正确的人体组织单位,可以作为最佳的人体体外模型,甚至移植。这里,我们回顾了组织工程方法,这些方法可用于开发强大的方法来指导多尺度,3-D人类类器官形态发生。迫切需要这种技术合并,以利用类器官形态发生作为具有仿生解剖学和生理学的功能性人体组织工程的工具。
    人类PSC衍生的3-D类器官正在彻底改变生物医学科学。它们能够在患者特定的遗传背景和前所未有的仿生组织微环境中研究发育和疾病。然而,他们不受控制,微尺度的自发形态发生产生了宏观类器官形态的不一致,细胞结构,和细胞组成限制了它们的标准化和应用。将组织工程方法与类器官衍生方案相结合,可以使我们通过指导标准化的体外形态发生来利用其潜力,从而在所有规模上产生具有仿生能力的类器官。这样的进步将使得能够使用类器官作为“下一代”功能性组织工程的基础,解剖学模拟人体组织和潜在的新型器官移植。这里,我们讨论了类器官形态发生的关键方面,其中创新的组织工程方法的应用将在实现这一目标方面取得重大进展。
    Three-dimensional organoids derived from human pluripotent stem cell (hPSC) derivatives have become widely used in vitro models for studying development and disease. Their ability to recapitulate facets of normal human development during in vitro morphogenesis produces tissue structures with unprecedented biomimicry. Current organoid derivation protocols primarily rely on spontaneous morphogenesis processes to occur within 3-D spherical cell aggregates with minimal to no exogenous control. This yields organoids containing microscale regions of biomimetic tissues, but at the macroscale (i.e. 100\'s of microns to millimeters), the organoids\' morphology, cytoarchitecture, and cellular composition are non-biomimetic and variable. The current lack of control over in vitro organoid morphogenesis at the microscale induces aberrations at the macroscale, which impedes realization of the technology\'s potential to reproducibly form anatomically correct human tissue units that could serve as optimal human in vitro models and even transplants. Here, we review tissue engineering methodologies that could be used to develop powerful approaches for instructing multiscale, 3-D human organoid morphogenesis. Such technological mergers are critically needed to harness organoid morphogenesis as a tool for engineering functional human tissues with biomimetic anatomy and physiology.
    Human PSC-derived 3-D organoids are revolutionizing the biomedical sciences. They enable the study of development and disease within patient-specific genetic backgrounds and unprecedented biomimetic tissue microenvironments. However, their uncontrolled, spontaneous morphogenesis at the microscale yields inconsistences in macroscale organoid morphology, cytoarchitecture, and cellular composition that limits their standardization and application. Integration of tissue engineering methods with organoid derivation protocols could allow us to harness their potential by instructing standardized in vitro morphogenesis to generate organoids with biomimicry at all scales. Such advancements would enable the use of organoids as a basis for \'next-generation\' tissue engineering of functional, anatomically mimetic human tissues and potentially novel organ transplants. Here, we discuss critical aspects of organoid morphogenesis where application of innovative tissue engineering methodologies would yield significant advancement towards this goal.
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  • 文章类型: Journal Article
    The fluorescence of BODIPY and click-BODIPY dyes was found to substantially increase in the presence of bovine serum albumin (BSA). BSA acted as a solubilizer for dye aggregates, in addition to being a conventional binding scaffold for the click-BODIPY dyes, indicating that disaggregation of fluorophores should be considered when evaluating dye-protein interactions.
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  • 文章类型: Journal Article
    A new method for the discovery of amphiphiles by using high-throughput (HT) methods to synthesise and characterise a library of galactose- and glucose-containing amphiphilic compounds is presented. The copper-catalysed azide–alkyne cycloaddition (CuAAC) “click” reaction between azide-tethered simple sugars and alkyne-substituted hydrophobic tails was employed to synthesise a library of compounds with systematic variations in chain length and unsaturation in a 24-vial array format. The liquid–crystalline phase behaviour was characterised in a HT manner by using synchrotron small-angle X-ray scattering (SSAXS). The observed structural variation with respect to chain parameters, including chain length and degree of unsaturation, is discussed, as well as hydration effects and degree of hydrogen bonding between head groups. The validity of our HT screening approach was verified by resynthesising a short-chain glucose amphiphile. A separate phase analysis of this compound confirmed the presence of numerous lyotropic liquid–crystalline phases.
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