antivirals

抗病毒药物
  • 文章类型: Journal Article
    靶向蛋白质降解已被广泛采用作为消除已建立和先前顽固的治疗靶标的新方法。这里,据报道,登革热病毒的包膜(E)蛋白的小分子降解物的发展。通过连接两个先前报道的E结合小分子来开发两类二价E降解剂,GNF-2和CVM-2-12-2,以基于戊二酰亚胺的CRL4CRBN连接酶招募者,以影响蛋白酶体介导的E蛋白降解。ZXH-2-107(基于GNF-2)是具有ABL抑制活性的E-降解剂,而ZXH-8-004(基于CVM-2-12-2)是选择性和有效的E-降解剂。这两种化合物提供了概念证明,即使用二价降解剂可以有效消除诸如病毒包膜蛋白之类的难药用靶标,并为未来开发新一类直接作用的抗病毒药物提供了起点。
    Targeted protein degradation has been widely adopted as a new approach to eliminate both established and previously recalcitrant therapeutic targets. Here, it is reported that the development of small molecule degraders of the envelope (E) protein of dengue virus. Two classes of bivalent E-degraders are developed by linking two previously reported E-binding small molecules, GNF-2, and CVM-2-12-2, to a glutarimide-based recruiter of the CRL4CRBN ligase to effect proteosome-mediated degradation of the E protein. ZXH-2-107 (based on GNF-2) is an E-degrader with ABL inhibitory activity while ZXH-8-004 (based on CVM-2-12-2) is a selective and potent E-degrader. These two compounds provide proof of concept that difficult-to-drug targets such as a viral envelope protein can be effectively eliminated using a bivalent degrader and provide starting points for the future development of a new class of direct-acting antiviral drugs.
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  • 文章类型: Journal Article
    Fpocket和虚拟筛选技术的使用使我们能够识别SARS-CoV-2RNA依赖性RNA聚合酶(RdRp)中潜在的变构可药用口袋。在筛选的化合物中,化合物1被确定为有希望的抑制剂,在10µM浓度的酶促测定中,将SARS-CoV-2RdRp活性降低至57%。随后优化化合物1的结构以保持或增强抑制活性。这涉及用更惰性的官能团取代有问题的酯和芳族硝基。N,具有两个NH基团的N'-二苯基脲支架被认为是化合物活性所必需的,但在Calu-3细胞中也表现出高毒性。为了解决这个问题,采用支架跳跃方法用潜在毒性较小的尿素等排物代替尿素核心。这种方法产生了几种具有显著活性的结构类似物,特别是2,2'-双咪唑(在化合物55中,残留活性RA=42%)和(1H-咪唑-2-基)脲(在化合物59和60中,RA=50和28%,分别)。尽管取得了这些进展,毒性仍然是一个主要问题。这些化合物代表了SARS-CoV-2RdRp的变构抑制剂的进一步结构-活性关系研究的有希望的起点,目的是降低它们的细胞毒性和提高水溶性。
    The use of Fpocket and virtual screening techniques enabled us to identify potential allosteric druggable pockets within the SARS-CoV-2 RNA-dependent RNA polymerase (RdRp). Of the compounds screened, compound 1 was identified as a promising inhibitor, lowering a SARS-CoV-2 RdRp activity to 57% in an enzymatic assay at 10 µM concentration. The structure of compound 1 was subsequently optimized in order to preserve or enhance inhibitory activity. This involved the substitution of problematic ester and aromatic nitro groups with more inert functionalities. The N,N\'-diphenylurea scaffold with two NH groups was identified as essential for the compound\'s activity but also exhibited high toxicity in Calu-3 cells. To address this issue, a scaffold hopping approach was employed to replace the urea core with potentially less toxic urea isosteres. This approach yielded several structural analogues with notable activity, specifically 2,2\'-bisimidazol (in compound 55 with residual activity RA = 42%) and (1H-imidazol-2-yl)urea (in compounds 59 and 60, with RA = 50 and 28%, respectively). Despite these advances, toxicity remained a major concern. These compounds represent a promising starting point for further structure-activity relationship studies of allosteric inhibitors of SARS-CoV-2 RdRp, with the goal of reducing their cytotoxicity and improving aqueous solubility.
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  • 文章类型: Journal Article
    尼帕病毒(NiV)是一种新兴的病原体,可引起脑炎,并在受感染的受试者中引起高死亡率。本系统综述旨在全面分析NiV的全球流行病学和研究进展,以确定文献中的关键知识空白。使用文献数据库搜索的文章,即PubMed,Scopus,WebofScience,和科学直接发表了5596篇文章。文章筛选后,本系统综述共包括97篇文章,包括41项流行病学研究和56项关于NiV的研究进展。大多数NiV流行病学研究是在孟加拉国进行的,反映了该国NiV爆发的沉重负担。1998年在马来西亚发现了最初的NiV爆发,随后在孟加拉国报告了爆发,印度,和菲律宾。传输路线因国家而异,主要通过马来西亚的猪,孟加拉国的椰枣汁消费,和人对人在印度。然而,NiV基因组序列的可用性仍然有限,特别是来自马来西亚和印度。死亡率也因国家而异,孟加拉国超过70%,印度,菲律宾,马来西亚不到40%。了解各国死亡率的差异对于通报NiV流行病学和加强疫情预防和管理策略至关重要。在研究发展方面,大多数研究集中在疫苗开发上,其次是系统发育分析和抗病毒研究。虽然许多疫苗和抗病毒药物在动物模型中表现出完全的保护作用,只有两种疫苗进入临床试验。系统发育分析揭示了马来西亚NiV之间的不同进化枝,NiV孟加拉国,和NiV印度,提议将NiV印度归类为与NiV孟加拉国分开的菌株。一起来看,整合疾病监测和研究的全面OneHealth方法对于未来的NiV研究至关重要。扩展NiV基因组序列的数据集,特别是来自马来西亚,孟加拉国,印度将是关键。这些研究工作对于提高我们对NiV致病性的理解和开发强大的诊断分析至关重要。有效准备和应对未来NiV爆发所需的疫苗和治疗。
    Nipah virus (NiV) is an emerging pathogen that causes encephalitis and a high mortality rate in infected subjects. This systematic review aimed to comprehensively analyze the global epidemiology and research advancements of NiV to identify the key knowledge gaps in the literature. Articles searched using literature databases, namely PubMed, Scopus, Web of Science, and Science Direct yielded 5,596 articles. After article screening, 97 articles were included in this systematic review, comprising 41 epidemiological studies and 56 research developments on NiV. The majority of the NiV epidemiological studies were conducted in Bangladesh, reflecting the country\'s significant burden of NiV outbreaks. The initial NiV outbreak was identified in Malaysia in 1998, with subsequent outbreaks reported in Bangladesh, India, and the Philippines. Transmission routes vary by country, primarily through pigs in Malaysia, consumption of date palm juice in Bangladesh, and human-to-human in India. However, the availability of NiV genome sequences remains limited, particularly from Malaysia and India. Mortality rates also vary according to the country, exceeding 70% in Bangladesh, India, and the Philippines, and less than 40% in Malaysia. Understanding these differences in mortality rate among countries is crucial for informing NiV epidemiology and enhancing outbreak prevention and management strategies. In terms of research developments, the majority of studies focused on vaccine development, followed by phylogenetic analysis and antiviral research. While many vaccines and antivirals have demonstrated complete protection in animal models, only two vaccines have progressed to clinical trials. Phylogenetic analyses have revealed distinct clades between NiV Malaysia, NiV Bangladesh, and NiV India, with proposals to classify NiV India as a separate strain from NiV Bangladesh. Taken together, comprehensive OneHealth approaches integrating disease surveillance and research are imperative for future NiV studies. Expanding the dataset of NiV genome sequences, particularly from Malaysia, Bangladesh, and India will be pivotal. These research efforts are essential for advancing our understanding of NiV pathogenicity and for developing robust diagnostic assays, vaccines and therapeutics necessary for effective preparedness and response to future NiV outbreaks.
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  • 文章类型: Journal Article
    肝细胞癌(HCC)的监测已被证明可以增加早期发现的肿瘤比例和接受治愈性治疗的机会,降低死亡率约30%。
    目前的建议包括对肝硬化患者和慢性病毒性肝炎患者的特定亚组进行半年一次腹部超声检查,包括或不包括血清甲胎蛋白测量。抗病毒治疗,如nucleot(s)ide类似物,有效抑制乙型肝炎病毒(HBV)的复制和直接作用的抗病毒药物能够消除丙型肝炎病毒(HCV)在>90%的患者,从根本上改变了病毒性肝病的结果,但没有消除,肝硬化和非肝硬化患者肝癌的风险。HCC风险是实施具有成本效益的监测的关键起点,也应指导有关其方式的决策过程。随着全球有效治疗的病毒患者数量不断增加,迫切需要确定监测的利弊比对谁有利,并确定如何对此类患者进行具有成本效益的筛查。
    本文讨论了这一主题,并试图确定哪些患者应在HBV抑制或HCV根除后继续进行HCC监测,基于成本效益原则和HCC风险随时间下降的事实。我们还制定了一项监测算法的建议,该算法将HCC的监测使用从“一刀切”方法转换为基于肿瘤风险(精确监测)的个性化计划。
    UNASSIGNED: Surveillance for hepatocellular carcinoma (HCC) has been proven to increase the proportion of tumors detected at early stages and the chance of receiving curative therapies, reducing mortality by about 30%.
    UNASSIGNED: Current recommendations consist of a semi-annual abdominal ultrasound with or without serum alpha-fetoprotein measurement in patients with cirrhosis and specific subgroups of populations with chronic viral hepatitis. Antiviral therapies, such as nucleot(s)ide analogs that efficiently suppress the replication of hepatitis B virus (HBV) and direct-acting antiviral drugs able to eliminate the hepatitis C virus (HCV) in >90% of patients, have radically changed the outcomes of viral liver disease and decreased, but not eliminated, the risk of HCC in both cirrhotic and non-cirrhotic patients. HCC risk is a key starting point for implementing a cost-effective surveillance and should also guide the decision-making process concerning its modality. As the global number of effectively treated viral patients continues to rise, there is a pressing need to identify those for whom the benefit-to-harm ratio of surveillance is favorable and to determine how to conduct cost-effective screening on such patients.
    UNASSIGNED: This article addresses this topic and attempts to determine which patients should continue HCC surveillance after HBV suppression or HCV eradication, based on cost-effectiveness principles and the fact that HCC risk declines over time. We also formulate a proposal for a surveillance algorithm that switches the use of surveillance for HCC from the \"one-size-fits-all\" approach to individualized programs based on oncologic risk (precision surveillance).
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  • 文章类型: Journal Article
    基孔肯雅病毒(CHIKV),通过蚊子传播,对全球健康构成重大威胁。目前,目前尚无有效的治疗方案来减轻疾病负担.缺乏针对CHIKV的批准疗法以及复杂的慢性肌肉骨骼和神经系统表现引起了人们的关注。重新利用药物可以为制定有效的治疗策略提供迅速的途径。RNA加帽是非结构蛋白1(nsP1)在CHIKV复制中的关键步骤。在这项研究中,FDA批准的针对CHIKVnsP1甲基转移酶(MTase)的抗病毒药物已通过基于结构的虚拟筛选进行鉴定。盐酸小檗碱(BH),ABT199/维奈托克(ABT),和波纳替尼(PT)是最热门的,表现出强大的结合能。基于色氨酸荧光光谱法的测定证实了BH-,ABT-,和PT纯化nsP1,KD值为5.45μM,161.3μM,和〜3.83μM,分别。在基于毛细管电泳的检测中,观察到CHIKVnsP1MTase活性呈剂量依赖性下降.用BH治疗,ABT,和PT导致病毒滴度的剂量依赖性降低,IC50<100,〜6.75和<3.9nM,分别,并降低病毒mRNA水平。nsP1MTases在甲病毒中高度保守;因此,BH,ABT,还有PT,正如预期的那样,抑制辛德毕斯病毒(SINV)复制子的复制机制,IC50~1.94,~0.23,>1.25μM,分别。这些结果强调了重新利用药物作为针对CHIKV的快速和有效的抗病毒治疗剂的功效和希望。
    Chikungunya virus (CHIKV), transmitted by mosquitoes, poses a significant global health threat. Presently, no effective treatment options are available to reduce the disease burden. The lack of approved therapeutics against CHIKV and the complex spectrum of chronic musculoskeletal and neurological manifestations raise significant concerns, and repurposing drugs could offer swift avenues in the development of effective treatment strategies. RNA capping is a crucial step meditated by non-structural protein 1 (nsP1) in CHIKV replication. In this study, FDA-approved antivirals targeting CHIKV nsP1 methyltransferase (MTase) have been identified by structure-based virtual screening. Berbamine Hydrochloride (BH), ABT199/Venetoclax (ABT), and Ponatinib (PT) were the top-hits, which exhibited robust binding energies. Tryptophan fluorescence spectroscopy-based assay confirmed binding of BH-, ABT-, and PT to purified nsP1 with KD values ∼5.45 μM, ∼161.3 μM, and ∼3.83 μM, respectively. In a capillary electrophoresis-based assay, a decrease in CHIKV nsP1 MTase activity was observed in a dose-dependent manner. Treatment with BH, ABT, and PT lead to a dose-dependent reduction in the virus titer with IC50 < 100, ∼6.75, and <3.9 nM, respectively, and reduced viral mRNA levels. The nsP1 MTases are highly conserved among alphaviruses; therefore, BH, ABT, and PT, as expected, inhibited replication machinery in Sindbis virus (SINV) replicon assay with IC50 ∼1.94, ∼0.23, and >1.25 μM, respectively. These results highlight the potential of repurposing drugs as rapid and effective antiviral therapeutics against CHIKV.
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  • 文章类型: Journal Article
    人巨细胞病毒是一种与人类共同进化的古老病毒。它在没有疫苗接种或治愈的可疑个体中建立了终身感染。该病毒可以在血清反应阳性的孕妇中传播给发育中的胎儿,它是先天性传染病的主要原因。虽然大多数受感染的婴儿在出生时仍然无症状,先天性巨细胞病毒感染可导致幸存者长期严重的神经发育障碍,造成相当大的经济和社会困难。关于巨细胞病毒病理生理学和病毒复制周期的最新发现可能有助于创新诊断和治疗的发展。包括有效的疫苗。这篇综述将详细介绍我们对人类巨细胞病毒感染的理解,关于有助于其病理生理学的病毒基因组和转录组的深入讨论。新生儿的临床过程也将被强调,包括产妇和新生儿检查,治疗建议,和长期结果。
    Human cytomegalovirus is an ancient virus that has co-evolved with humans. It establishes a life-long infection in suspectable individuals for which there is no vaccination or cure. The virus can be transmitted to a developing fetus in seropositive pregnant women, and it is the leading cause of congenital infectious disease. While the majority of infected infants remain asymptomatic at birth, congenital cytomegalovirus infection can lead to substantial long-term neurodevelopmental impairments in survivors, resulting in considerable economic and social hardships. Recent discoveries regarding cytomegalovirus pathophysiology and viral replication cycles might enable the development of innovative diagnostics and therapeutics, including an effective vaccine. This Review will detail our understanding of human cytomegalovirus infection, with an in-depth discussion regarding the viral genome and transcriptome that contributes to its pathophysiology. The neonate\'s clinical course will also be highlighted, including maternal and neonatal testing, treatment recommendations, and long-term outcomes.
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  • 文章类型: Journal Article
    解决怀孕期间管理病毒感染的复杂性对于明智的医疗决策至关重要。这篇全面的综述深入探讨了影响孕妇的关键病毒感染的管理,即人类免疫缺陷病毒(HIV),乙型肝炎病毒/丙型肝炎病毒(HBV/HCV),流感,巨细胞病毒(CMV),和SARS-CoV-2(COVID-19)。我们评估了每种感染的抗病毒治疗的安全性和有效性,同时还探索创新途径,如基因疫苗及其在减轻怀孕期间病毒威胁方面的潜力。此外,审查审查了克服挑战的策略,包括预防性和治疗性疫苗研究,监管方面的考虑,和安全协议。利用先进的方法,包括PBPK建模,机器学习,人工智能,和因果推断,我们可以在这个复杂的领域中增强我们的理解力和决策能力。这篇叙述性评论旨在阐明不同的方法和正在进行的进步,这篇综述旨在促进孕妇抗病毒治疗的进展,改善产妇和胎儿的健康结局。
    Addressing the complexities of managing viral infections during pregnancy is essential for informed medical decision-making. This comprehensive review delves into the management of key viral infections impacting pregnant women, namely Human Immunodeficiency Virus (HIV), Hepatitis B Virus/Hepatitis C Virus (HBV/HCV), Influenza, Cytomegalovirus (CMV), and SARS-CoV-2 (COVID-19). We evaluate the safety and efficacy profiles of antiviral treatments for each infection, while also exploring innovative avenues such as gene vaccines and their potential in mitigating viral threats during pregnancy. Additionally, the review examines strategies to overcome challenges, encompassing prophylactic and therapeutic vaccine research, regulatory considerations, and safety protocols. Utilizing advanced methodologies, including PBPK modeling, machine learning, artificial intelligence, and causal inference, we can amplify our comprehension and decision-making capabilities in this intricate domain. This narrative review aims to shed light on diverse approaches and ongoing advancements, this review aims to foster progress in antiviral therapy for pregnant women, improving maternal and fetal health outcomes.
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  • 文章类型: Journal Article
    严重急性呼吸系统综合症冠状病毒2型(SARS-CoV-2)由于其进化和产生新的亚变体的能力,仍然是全球威胁,导致新的感染浪潮.此外,其他冠状病毒,如中东呼吸综合征冠状病毒(MERS-CoV,以前称为hCoV-EMC),这种疾病于2012年首次出现,持续存在并继续对人类构成严重疾病的威胁。新型冠状病毒的持续鉴定,加上不同菌株之间遗传重组的潜力,增加了全球关注的新型冠状病毒进化枝出现的可能性。因此,迫切需要pan-CoV治疗药物和疫苗。在HCV蛋白酶抑制剂筛选的广泛优化之后,发现了一种新型3CLPro抑制剂(MK-7845),随后进行了分析.MK-7845表现出针对一组临床SARS-CoV-2亚变体和MERS-CoV的具有广谱活性的纳摩尔体外效力。此外,口服时,在感染SARS-CoV-2(K18-hACE2小鼠)和MERS-CoV(K18-hDDP4小鼠)的转基因小鼠的肺中,MK-7845显示病毒负荷显著降低>6个对数数量级。
    Severe acute respiratory syndrome coronavirus type 2 (SARS-CoV-2) continues to be a global threat due to its ability to evolve and generate new subvariants, leading to new waves of infection. Additionally, other coronaviruses like Middle East respiratory syndrome coronavirus (MERS-CoV, formerly known as hCoV-EMC), which first emerged in 2012, persist and continue to present a threat of severe illness to humans. The continued identification of novel coronaviruses, coupled with the potential for genetic recombination between different strains, raises the possibility of new coronavirus clades of global concern emerging. As a result, there is a pressing need for pan-CoV therapeutic drugs and vaccines. After the extensive optimization of an HCV protease inhibitor screening hit, a novel 3CLPro inhibitor (MK-7845) was discovered and subsequently profiled. MK-7845 exhibited nanomolar in vitro potency with broad spectrum activity against a panel of clinical SARS-CoV-2 subvariants and MERS-CoV. Furthermore, when administered orally, MK-7845 demonstrated a notable reduction in viral burdens by >6 log orders in the lungs of transgenic mice infected with SARS-CoV-2 (K18-hACE2 mice) and MERS-CoV (K18-hDDP4 mice).
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  • 文章类型: Journal Article
    如今,细菌和病毒来源的传染病代表了世界范围内的严重医学问题。事实上,抗生素耐药性的发展是导致细菌菌株出现的原因,这些菌株甚至对新型抗生素也是难以抵抗的。此外,最近的COVID-19大流行表明,新病毒可能会出现并在世界各地传播。传染病的增加取决于多种因素,包括营养不良,人口从发展中国家大量迁移到工业化地区,和人类微生物群的改变。已经深入探索了常规抗生素和抗病毒药物的替代疗法。在这方面,植物和海洋生物是产品的巨大来源,如多酚,生物碱,羊毛硫肽,和萜类化合物,具有抗菌和抗病毒活性。它们的主要作用机制涉及细菌细胞膜的修饰,随着孔隙的形成,细胞内容的释放,以及抑制细菌对宿主细胞的粘附,以及外排泵。天然抗病毒药物可以干扰病毒复制和传播,通过增强干扰素的产生来保护宿主。值得注意的是,这些抗病毒药物并非没有副作用,它们对人类的管理需要更多的安全性研究。天然抗菌和抗病毒化合物的临床前研究证实了它们对细菌和病毒的作用,但仍然只有少数临床试验。因此,它们的充分开发和更深入的临床研究代表了医学领域的下一步。
    Nowadays, infectious diseases of bacterial and viral origins represent a serious medical problem worldwide. In fact, the development of antibiotic resistance is responsible for the emergence of bacterial strains that are refractory even to new classes of antibiotics. Furthermore, the recent COVID-19 pandemic suggests that new viruses can emerge and spread all over the world. The increase in infectious diseases depends on multiple factors, including malnutrition, massive migration of population from developing to industrialized areas, and alteration of the human microbiota. Alternative treatments to conventional antibiotics and antiviral drugs have intensively been explored. In this regard, plants and marine organisms represent an immense source of products, such as polyphenols, alkaloids, lanthipeptides, and terpenoids, which possess antibacterial and antiviral activities. Their main mechanisms of action involve modifications of bacterial cell membranes, with the formation of pores, the release of cellular content, and the inhibition of bacterial adherence to host cells, as well as of the efflux pump. Natural antivirals can interfere with viral replication and spreading, protecting the host with the enhanced production of interferon. Of note, these antivirals are not free of side effects, and their administration to humans needs more research in terms of safety. Preclinical research with natural antibacterial and antiviral compounds confirms their effects against bacteria and viruses, but there are still only a few clinical trials. Therefore, their full exploitation and more intensive clinical studies represent the next steps to be pursued in this area of medicine.
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  • 文章类型: Journal Article
    在SARS-CoV-2大流行中,到目前为止,两种最有效的抗病毒药物是蛋白酶抑制剂Nirmatrelvir,与利托那韦(Paxlovid)和ensitrelvir(Xocova)联合使用。然而,抗病毒药物和所有抗菌药物迟早会受到耐药性突变的挑战。研究这种突变对于治疗决策和大流行准备至关重要。同时,产生抗性病毒来评估突变体是有争议的,特别是具有大流行潜力的病原体,如SARS-CoV-2。为了避免使用非减毒SARS-CoV-2进行功能获得研究,使用了一种先前开发的基于依赖于SARS-CoV-2主要蛋白酶(VSV-Mpro)的嵌合水泡性口炎病毒的安全系统来选择针对ensitrelvir的突变。Ensitrelvir由于其单一物质配方而在临床上特别相关,在Paxlovid中避免共同配制的CYP3A4抑制剂利托那韦的药物相互作用。通过用ensitrelvir治疗VSV-Mpro,选择了几种针对该抑制剂的高特异性抗性突变体,同时仍然完全或很大程度上容易感染尼马特雷韦。然后,我们在金标准酶测定和SARS-CoV-2复制子中确认了几种安替瑞韦特异性突变体。这些发现表明,这两种抑制剂可以有不同的病毒抗性谱,这可以决定治疗决定。
    In the SARS-CoV-2 pandemic, the so far two most effective approved antivirals are the protease inhibitors nirmatrelvir, in combination with ritonavir (Paxlovid) and ensitrelvir (Xocova). However, antivirals and indeed all antimicrobial drugs are sooner or later challenged by resistance mutations. Studying such mutations is essential for treatment decisions and pandemic preparedness. At the same time, generating resistant viruses to assess mutants is controversial, especially with pathogens of pandemic potential like SARS-CoV-2. To circumvent gain-of-function research with non-attenuated SARS-CoV-2, a previously developed safe system based on a chimeric vesicular stomatitis virus dependent on the SARS-CoV-2 main protease (VSV-Mpro) was used to select mutations against ensitrelvir. Ensitrelvir is clinically especially relevant due to its single-substance formulation, avoiding drug-drug interactions by the co-formulated CYP3A4 inhibitor ritonavir in Paxlovid. By treating VSV-Mpro with ensitrelvir, several highly-specific resistant mutants against this inhibitor were selected, while being still fully or largely susceptible to nirmatrelvir. We then confirmed several ensitrelvir-specific mutants in gold standard enzymatic assays and SARS-CoV-2 replicons. These findings indicate that the two inhibitors can have distinct viral resistance profiles, which could determine treatment decisions.
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