Opportunistic pathogen

机会性病原体
  • 文章类型: Case Reports
    此病例报告描述了一名因重症肺炎住院的女婴的病例。在治疗过程中,各种抗生素用于治疗和预防进一步的感染。孩子的身体状况很虚弱,合并神经母细胞瘤,副肿瘤综合征,免疫功能低下,导致酪氨酸梭菌感染。由于预后不良,最终放弃了治疗。本研究旨在通过媒介,染色,电子显微镜观察,16srRNA和高通量测序研究了形态学特征,染色属性,电子显微镜形态学,抗生素耐药性,和酪氨酸酶的基因组特征。本研究旨在为临床检验人员进行细菌鉴定研究提供数据参考,为临床医生的诊断和治疗提供相关帮助。
    This case report describes the case of a female infant hospitalized for severe pneumonia. During the treatment process, various antibiotics are used to treat and prevent further infection. The child had a weak physical condition, combined with neuroblastoma, paraneoplastic syndrome, and low immune function, leading to Tsukamurella tyrosinosolvens infection. The treatment was eventually abandoned owing to poor prognosis. This study aims to through the medium, dyeing, electron microscope observation, 16s rRNA and high-throughput sequencing investigated the morphological characteristics, staining properties, electron microscope morphology, antibiotic resistance, and genomic characteristics of Tsukamurella tyrosinosolvens. The aim of the study is to provide data reference for clinical laboratory staff in bacteria identification research, and to provide relevant help for clinicians in diagnosis and treatment.
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  • 文章类型: Case Reports
    隐球菌病,癌症患者中相对罕见的感染通常与诊断延迟和高病死率相关,这是由于其高度异质性和变形蛋白表现。在这种情况下,早期识别和开始适当的抗真菌治疗可能会产生有利的结果。在这里,我们报告了印度南部三级医疗癌症中心的癌症患者中的三例隐球菌病。所有三名患者均为不同年龄的男性,表现为实体器官或血液系统恶性肿瘤形式的免疫抑制,并正在使用免疫抑制药物,例如类固醇或化学治疗剂。他们出现了隐球菌血症和隐球菌性脑膜炎。在该亚组患者中,经微生物证实的隐球菌病患者的预后较差。
    Cryptococcosis, a relatively uncommon infection in cancer patients is often associated with delayed diagnosis and high fatality rate due to its highly heterogeneous and protean manifestations. Early recognition and initiation of appropriate antifungal therapy might have a favourable outcome in such cases. Here we report three cases of Cryptococcosis among cancer patients in a tertiary care cancer centre in South India. All three patients were males of different ages at presentation with immunosuppression in the form of solid organ or hematologic malignancy and were using immunosuppressive medications like steroids or chemotherapeutic agents. They presented with cryptococcemia and cryptococcal meningitis. Patients with microbiologically proven cryptococcosis had poor outcome in this subgroup of patients.
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  • 文章类型: Journal Article
    柠檬酸杆菌koseri(C.koseri)是革兰氏阴性的,能动,属于肠杆菌科的非孢子形成兼性厌氧杆菌。C.koseri通常利用柠檬酸盐作为唯一的碳源并且构成人和动物的正常胃肠菌群的一部分。作为一种机会性病原体,C.koseri感染主要在新生儿中观察到,老年人,和免疫受损的宿主。C.koseri已成为新生儿脑膜炎和脑脓肿的主要病因之一。近年来,据报道,由C.koseri引起的严重感染的成人病例越来越多。这里,我们首次报道一例重症哮喘患者并发C.koseri腹腔感染的临床病例,并对相关文献进行简要回顾.有了这份报告,我们希望提高临床医生对需要长期口服糖皮质激素的哮喘患者并发肠道共生菌感染可能性的认识和警觉性.
    Citrobacter koseri (C. koseri) is a Gram-negative, motile, non-spore-forming facultative anaerobic bacillus belonging to the Enterobacteriaceae family. C. koseri typically utilizes citrate as the sole carbon source and constitutes part of the normal gastrointestinal flora in humans and animals. As an opportunistic pathogen, C. koseri infections are mainly observed in neonates, elderly individuals, and immunocompromised hosts. C. koseri has been one of the main etiological agents of neonatal meningitis and cerebral abscess. In recent years, an increasing number of cases have been reported in adults with severe infections caused by C. koseri. Here, we report for the first time a clinical case of concurrent C. koseri intra-abdominal infection in a patient with severe asthma and provide a brief review of the relevant literature. With this report, we hope to increase awareness and alertness among clinicians to the possibility of concurrent infection of gut commensal bacteria in asthmatic patients requiring long-term oral corticosteroid administration.
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  • 文章类型: Journal Article
    未经授权:Kocuriakristinae是一种共生生物,有时被认为是实验室污染物,但它在免疫功能低下患者的临床样本中反复分离应该引起危险信号。
    UNASSIGNED:在开始治疗之前,我们通过从同一部位重新分离生物体来确认感染。为了识别Kocuriakristinae,我们在VITEK2紧凑型系统上使用了IDGP卡。根据CLSI指南2018针对凝固酶阴性葡萄球菌手动进行抗生素敏感性试验。
    UNASSIGNED:在两年的时间里,共进行了510次主要的头颈部手术。其中120例患者有皮肤和软组织感染。在这些被感染的病人中,90例培养阳性,其中12例患者分离出这些Kocuriakristinae。对青霉素和苯唑西林的耐药性在所有分离株中可见。
    未经证实:Kocuriakristinae作为免疫受损宿主中的共生菌群或实验室污染物不应忽视。它的阻力模式增加是一个令人担忧的问题。它是一种被忽视的机会性病原体,应制定详细的敏感性试验以及时有效地治疗患者。
    UNASSIGNED: Kocuria kristinae is a commensal organism, sometimes considered as a lab contaminant, but its repeated isolation from clinical samples in immunocompromised patients should raise red flags.
    UNASSIGNED: We confirmed the infection with re-isolation of the organism from the same site before starting treatment. For the identification of Kocuria kristinae we used IDGP cards on VITEK 2 compact system. Antibiotic susceptibility test was done manually following CLSI guidelines 2018 for Coagulase-negative staphylococci.
    UNASSIGNED: A total of 510 major head neck oncosurgeries were performed during the period of two years. Out of which 120 patients had skin and soft tissue infections. Out of these infected patients, 90 were culture positive and of these Kocuria kristinae were isolated in 12 patients. Resistance to penicillin and oxacillin is seen in all isolates.
    UNASSIGNED: Kocuria kristinae should not be ignored as a commensal flora or lab contaminant in immunocompromised hosts. Its Increase in resistance pattern is a matter of concern. It is an ignored opportunistic pathogen whose detailed sensitivity test should be developed to treat patients timely and effectively.
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  • 文章类型: Case Reports
    我们报告了首例由短双歧杆菌引起的坏死性筋膜炎和菌血症。一些短双歧杆菌菌株被称为益生菌。然而,它会导致婴儿和免疫受损患者的菌血症。我们的患者患上了坏死性筋膜炎,被认为是由慢性糖尿病足溃疡感染的。从患者的血液和软组织样本中分离出短双歧杆菌。患者接受截肢和静脉注射抗生素。
    We report the first case of necrotizing fasciitis and bacteremia caused by Bifidobacterium breve. Some Bifidobacterium breve strains are known as probiotic bacterium. However, it causes bacteremia in infants and immunocompromised patients. Our patient developed necrotizing fasciitis which was thought to have been infected from chronic diabetic foot ulcers. Bifidobacterium breve was isolated from the patient\'s blood and soft tissue sample. The patient underwent amputation and intravenous antibiotics administration.
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  • 文章类型: Case Reports
    Leclercia adecarboxylata is a motile, gram negative bacillus in the Enterobacteriaceae family that is a rarely isolated cause of disease, despite being ubiquitous in nature. A 2019 review article identified only 74 reported cases, most often in immunocompromised patients [1]. The organism is generally susceptible to most antibiotics although multiantibiotic resistant strains have been reported. We report a case of a 62-year-old Caucasian man with multiple co-morbidities treated for L. adecarboxylata endocarditis with intravenous ceftriaxone.
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  • 文章类型: Journal Article
    BACKGROUND: Serratia spp. is a common enteric bacterium generally thought not to be pathogenic in the gastrointestinal tract. Serratia marcescens is a member of the genus Serratia, which is a part of the family Enterobacteriales..Of all Serratia species, S. marcescens is the most common clinical isolate and the most important human pathogen.
    OBJECTIVE: We are discussing here four cases of Serratia marcescens which we reported in our laboratory in the Department of Microbiology Government Medical College and Hospital Chandigarh during six months of duration.
    METHODS: All the samples were processed and identified as per standard microbiological techniques.The isolates of Serratia marcescens were identified, depending upon their biochemical and morphological characters and further confirmed by MALDI-TOF-MS ,PGIMER Chandigarh.
    RESULTS: In one of the four cases there was polymicrobial infection and one patient was diabetic and rest three patients were immunocompetent. The importance of detection and reporting of Serratia marcescens is related to the concern regarding its increase spread in hospital settings as nosocomial infection .
    CONCLUSIONS: We need to identify and isolate this pathogen ,not thinking of only contaminant and opportunistic pathogen but as a pathogen which can lead to serious infections in hospital settings .
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  • 文章类型: Journal Article
    Urban Infiltration Basins (UIBs) are used to manage urban runoff transfers and feed aquifers. These UIBs can accumulate urban pollutants and favor the growth of potentially pathogenic biological agents as Nocardia.
    UNASSIGNED: To assess the spatio-temporal dynamics of pathogenic Nocardia in UIBs and to stablish phylogenetic relationships between clinical and UIB N. cyriacigeorgica strains. To assess pathogenicity associated with environmental N. cyriacigeorgica using an animal model, and to identify genetic elements that may be associated to its virulence.
    UNASSIGNED: A well-characterized UIB in terms of chemical pollutants from Lyon area was used in this study during a whole year. Cultural and Next-Generation-Sequencing methods were used for Nocardia detection and typing. Clinical and environmental isolates phylogenetic relationships and virulences were compared with Multilocus-Sequence-Analysis study together with a murine model.
    UNASSIGNED: In autumn, N. cyriacigeorgica and N. nova were the pathogenic most prevalent species in the UIB. The complex N. abscessus/asiatica was also detected together with some other non-pathogenic species. The presence of pathogenic Nocardia was positively correlated to metallic trace elements. Up to 1.0 × 103 CFU/g sediment of N. cyriacigeorgica and 6 OTUs splited in two different phylogroups were retrieved and were close to clinical strains. The EML446 tested UIB isolate showed significant infectivity in mice with pulmonary damages similar to clinical clone (GUH-2).
    UNASSIGNED: Hsp65 marker-based metabarcoding approach allowed detecting N. cyriacigeogica as the most abundant Nocardia pathogenic species in a UIB. Metal trace elements-polluted environments can be reservoirs of pathogenic Nocardia which may have a similar virulence to clinical strains.
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  • 文章类型: Case Reports
    BACKGROUND: Madelung\'s disease (MD) is a rare disorder of fat metabolism, which is usually associated with diabetes, hyperuricemia, liver disease, nevertheless there is no report of a patient with MD and pulmonary aspergillosis (PA). This article aimed to enhance the awareness of this two diseases and discuss the possible mechanism of the combination of them preliminarily.
    METHODS: In this case, we described a 56-year-old male patient with cough, expectoration and dyspnea. His neck has a very peculiar appearance. Chest enhanced CT scan showed there were multiple nodules in both lungs, some of which had cavities and the mediastinal lymph nodes were swollen. Ultrasound scan of the neck showed diffuse hyperplasia of subcutaneous fat in neck and bilateral supraclavicular fossa. Fortunately, after performing pulmonary wedge resection aimed at pathological examination and giving relevant treatments, this patient was finally diagnosed as MD with PA, and his symptoms were significantly relieved.
    CONCLUSIONS: MD is rare, the phenomenon that MD combined with PA is rarer. Immune disorder may be the possible mechanism.
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