Nucleus

Nucleus
  • 文章类型: Journal Article
    铁凋亡是一种新发现的受调节的细胞死亡形式,其特征在于依赖于铁的细胞内氧化应激的积累。铁凋亡不仅在肿瘤的发展和治疗中起着至关重要的作用,而且在神经退行性疾病和与缺血再灌注损伤相关的疾病的发病机理中起着至关重要的作用。这种细胞死亡模式具有区别于其他形式的细胞死亡的独特特性,包括细胞和亚细胞水平的独特形态变化,以及可以使用特定方法检测的分子特征。荧光探针的使用已成为检测铁中毒的一种宝贵手段,由于他们的高灵敏度,实时现场监测能力,对生物样本的损害最小。这篇综述全面阐明了铁死亡的生理机制,同时还详细介绍了能够检测各种细胞区室中与铁凋亡相关的活性物种的荧光探针的开发,包括细胞器,核,还有细胞膜.此外,这篇综述探讨了来自不同细胞区室的活性物种的动态变化和位置如何影响铁细胞死亡的点燃和执行。最后,我们讨论了未来成像的挑战和机遇。我们相信,这篇综述不仅有助于阐明铁死亡的生理机制,而且有助于确定新的治疗靶点和准确诊断和治疗铁死亡相关疾病的方法。
    Ferroptosis is a newly discovered form of regulated cellular demise, characterized by the accumulation of intracellular oxidative stress that is dependent on iron. Ferroptosis plays a crucial role not only in the development and treatment of tumors but also in the pathogenesis of neurodegenerative diseases and illnesses related to ischemia-reperfusion injury. This mode of cell death possesses distinctive properties that differentiate it from other forms of cell death, including unique morphological changes at both the cellular and subcellular levels, as well as molecular features that can be detected using specific methods. The use of fluorescent probes has become an invaluable means of detecting ferroptosis, owing to their high sensitivity, real-time in situ monitoring capabilities, and minimal damage to biological samples. This review comprehensively elucidates the physiological mechanisms underlying ferroptosis, while also detailing the development of fluorescent probes capable of detecting ferroptosis-related active species across various cellular compartments, including organelles, the nucleus, and the cell membrane. Additionally, the review explores how the dynamic changes and location of active species from different cellular compartments can influence the ignition and execution of ferroptotic cell death. Finally, we discuss the future challenges and opportunities for imaging ferroptosis. We believe that this review will not only aid in the elucidation of ferroptosis\'s physiological mechanisms but also facilitate the identification of novel treatment targets and means of accurately diagnosing and treating ferroptosis-related diseases.
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  • 文章类型: Journal Article
    最近积累的证据表明,细胞蛋白的核膜穿梭是常见的,这为细胞质中合成的蛋白质的亚细胞易位和生物学功能提供了新的见解。本研究旨在阐明质膜和细胞核之间蛋白质的运输。这些蛋白质主要由跨膜受体组成,膜衔接蛋白,粘附蛋白,信号蛋白和核蛋白,这有助于扩散,凋亡,化学抗性,附着力,迁移和基因表达。这些蛋白质经常经历串扰,例如跨膜蛋白与信号蛋白的相互作用。跨膜蛋白经历内吞作用,注入细胞器或蛋白水解成可溶性形式输入细胞核,而核蛋白与膜蛋白相互作用或充当受体。核细胞溶质易位涉及通过输入蛋白或输出蛋白通过核膜孔输出或输入。核蛋白通常与其他转录因子相互作用,然后结合启动子进行基因表达,而膜蛋白通过与其他膜和/或衔接蛋白结合而负责信号启动。蛋白质易位以细胞特异性方式发生,并与细胞生物学事件密切相关。本综述旨在提高对胞质蛋白在质膜和细胞核之间穿梭及其相关信号通路的理解。
    Recently accumulated evidence has indicated that the nucleomembrane shuttling of cellular proteins is common, which provides new insight into the subcellular translocation and biological functions of proteins synthesized in the cytoplasm. The present study aimed to clarify the trafficking of proteins between the plasma membrane and nucleus. These proteins primarily consist of transmembrane receptors, membrane adaptor proteins, adhesive proteins, signal proteins and nuclear proteins, which contribute to proliferation, apoptosis, chemoresistance, adhesion, migration and gene expression. The proteins frequently undergo cross‑talk, such as the interaction of transmembrane proteins with signal proteins. The transmembrane proteins undergo endocytosis, infusion into organelles or proteolysis into soluble forms for import into the nucleus, while nuclear proteins interact with membrane proteins or act as receptors. The nucleocytosolic translocation involves export or import through nuclear membrane pores by importin or exportin. Nuclear proteins generally interact with other transcription factors, and then binding to the promoter for gene expression, while membrane proteins are responsible for signal initiation by binding to other membrane and/or adaptor proteins. Protein translocation occurs in a cell‑specific manner and is closely linked to cellular biological events. The present review aimed to improve understanding of cytosolic protein shuttling between the plasma membrane and nucleus and the associated signaling pathways.
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  • 文章类型: Journal Article
    For decades, the biological roles of plant lectins remained obscure and subject to speculation. With the advent of technological and scientific progress, researchers have compiled a vast amount of information regarding the structure, biological activities and functionality of hundreds of plant lectins. Data mining of genomes and transcriptome sequencing and high-throughput analyses have resulted in new insights. This review aims to provide an overview of what is presently known about plant lectins, highlighting their versatility and the importance of plant lectins for a multitude of biological processes, such as plant development, immunity, stress signaling and regulation of gene expression. Though lectins primarily act as readers of the glycocode, the multiple roles of plant lectins suggest that their functionality goes beyond carbohydrate-recognition.
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  • 文章类型: Journal Article
    Mitochondria are controlled by the coordination of two genomes: the mitochondrial and the nuclear DNA. As such, variations in nuclear gene expression as a consequence of mutations and epigenetic modifications can affect mitochondrial functionality. Conversely, the opposite could also be true. However, the relationship between mitochondrial dysfunction and epigenetics, such as nuclear DNA methylation, remains largely unexplored. Mitochondria function as central metabolic hubs controlling some of the main substrates involved in nuclear DNA methylation, via the one carbon metabolism, the tricarboxylic acid cycle and the methionine pathway. Here, we review key findings and highlight new areas of focus, with the ultimate goal of getting one step closer to understanding the genomic effects of mitochondrial dysfunction on nuclear epigenetic landscapes.
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  • 文章类型: Journal Article
    TA characteristic feature of amyloid structures is polymorphism. The study of amyloid structures and their formation process was carried out for synthetic and recombinant Ab(1-40) and Ab(1-42) peptide preparations. In the study of these peptides, we recognized fibrils of different morphologies. We observed fibrillar formations in the form of single fibrils, ribbons, bundles, bunches, and clusters. Polymorphism of fibrils was observed not only when the environmental conditions changed, but under the same conditions and this was a common characteristics of all amyloid formations. Fibrils of Ab(1-40) peptides tended to form aggregates of fibrils in the form of ribbons, while Ab(1-42) peptide under the same conditions polymerized in the form of rough fibrils of different diameters and tends to branch. We assume that the formation of fibrils of Ab(1-40) and Ab(1-42) peptides occurs according to a simplified scheme: a destabilized monomer ® a ring oligomer ® a mature fibril consisting of ring oligomers. Proceeding from the proposition that the ring oligomer is the main building block of amyloid fibril (similar to the cell in the body), it is easy to explain fibril polymorphism, as well as fragmentation of mature fibrils under various external influences, branching and irregularity of diameter (surface roughness) of fibrils. One aspect of the study of amyloidogenesis is the determination of the regions of the protein chain forming the core of the amyloid fibril. We theoretically predicted amyloidogenic regions for two isoforms of Ab peptides capable of forming an amyloid structure: 16-21 and 32-36 residues. Using the method of tandem mass spectrometry, these regions were determined experimentally. It was shown that the regions of Ab(1-40) peptide from 16 to 22 and from 28 to 40 residues were resistant to the action of proteases, i.e. its formed the core of the amyloid fibril. For Ab(1-42) peptide the whole sequence is not available for the action of proteases, which indicates a different way of associating ring oligomers in the formation of fibrils. Based on electron microscopy and mass spectrometry data we proposed a molecular model of the fibril formed by Ab(1-40) and Ab(1-42) peptides.
    Kharakternoĭ osobennost\'iu amiloidnykh struktur iavliaetsia polimorfizm. Izuchenie amiloidnykh struktur i protsessa ikh formirovaniia bylo provedeno dlia sinteticheskikh i rekombinantnykh preparatov Ab(1-40) i Ab(1-42) peptidov. Pri issledovanii étikh peptidov nami byli polucheny fibrilly raznoĭ morfologii. My nabliudali fibrilliarnye obrazovaniia v vide odinochnykh fibrill, lent, zhgutov, puchkov i klasterov. Polimorfizm fibrill nabliudaetsia ne tol\'ko pri izmenenii usloviĭ sredy, no i v odnikh i tekh zhe usloviiakh, i iavliaetsia obshcheĭ kharakternoĭ osobennost\'iu vsekh amiloidnykh formirovaniĭ. Fibrilly Ab(1-40) peptidov imeiut tendentsiiu formirovat\' agregaty fibrill v vide lent, v to vremia kak Ab(1-42) peptid v tekh zhe usloviiakh polimerizuetsia v vide sherokhovatykh fibrill raznogo diametra i imeet sklonnost\' k vetvleniiu. My predpolagaem, chto formirovanie fibrill Ab(1-40) i Ab(1-42) peptidov proiskhodit po uproshchennoĭ skheme: destabilizirovannyĭ monomer ® kol\'tsevoĭ oligomer ® zrelaia fibrilla, sostoiashchaia iz kol\'tsevykh oligomerov. Iskhodia iz polozheniia, chto imenno kol\'tsevoĭ oligomer iavliaetsia osnovnoĭ stroitel\'noĭ edinitseĭ amiloidnoĭ fibrilly (analogichno kletke v organizme), mozhno legko ob\"iasnit\' polimorfizm fibrill, a takzhe droblenie zrelykh fibrill pri razlichnykh vneshnikh vozdeĭstviiakh, vetvlenie i neodnorodnost\' diametra (sherokhovatost\' poverkhnosti) fibrill. Odnim iz aspektov izucheniia amiloidogeneza iavliaetsia opredelenie uchastkov polipeptidnoĭ tsepi, formiruiushchikh ostov amiloidnoĭ fibrilly. Nami teoreticheski predskazany amiloidogennye uchastki dlia dvukh izoform Ab peptidov, sposobnye formirovat\' amiloidnuiu strukturu – aminokislotnye ostatki (a.o) 16-21 i 32-36. Pri pomoshchi metoda tandemnoĭ mass-spektrometrii éti uchastki byli opredeleny éksperimental\'no. Pokazano, chto uchastki peptida Ab(1-40) s 16 po 22 i s 28 po 40 a.o. ustoĭchivy k vozdeĭstviiu proteaz, to est\' vkhodiat v ostov amiloidnoĭ fibrilly. Dlia Ab(1-42) peptida pokazano, chto vsia posledovatel\'nost\' nedostupna deĭstviiu proteaz, chto svidetel\'stvuet o raznom sposobe assotsiatsii kol\'tsevykh oligomerov pri formirovanii fibrill. Na osnovanii metodov élektronnoĭ mikroskopii i mass-spektrometricheskikh dannykh nami predlozhena molekuliarnaia model\' fibrilly, obrazovannoĭ Ab(1-40) i Ab(1-42) peptidami.
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  • 文章类型: Case Reports
    Primary melanosis of the dentate nucleus is a rarely described entity with neither known cause nor definitive clinicopathologic correlation. We revisit this previously reported phenomenon by presenting one such case with a review of the pathology as well as additional investigations including elemental analysis by energy-dispersive X-ray, immunohistochemistry and electron microscopy. The lesion presented macroscopically as a sharply defined, black pigmentation that was restricted to the dentate nucleus of the cerebellum. Other deep nuclei were uninvolved. Similarly, other areas of the cerebellum, brainstem, and supratentorial regions were macroscopically free of pigment. Microscopically, however, the pigment was noted to be present, albeit in microscopic deposits, within layers of the cerebellar cortex. Additionally, immunohistochemistry and electron microscopy defined an intracellular component within astrocytes. X-ray analysis of the pigment showed it to consist almost entirely of sulfur, an element known to be prominent in neuromelanin. This report also describes an association of the pigment with astrocytes by ultrastructural examination. We discuss the results of our findings in the context of etiopathogenetic considerations, seeking to gain a better understanding of this abnormal pigmentation and its relationship to neuromelanin.
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  • 文章类型: Journal Article
    可溶性铝(Al)含量升高的酸性土壤约占世界耕地的40%,但是关于铝的根毒机制仍然存在很多不确定性。这篇综述研究了Al对根伸长率(RER)的毒性作用的动力学,它对根组织的影响,以及它在亚细胞水平上的位置。根据浓度和植物种类,可溶性Al在73min的中位时间内降低RER,但在大豆中只需5min。这最初是由于细胞在伸长区中各向异性地膨胀的速率降低。此后,根胚层和外皮质细胞通过减少细胞壁松弛而破裂。在该区域中,大多数Al积聚在质外体中。随后,Al通过对质膜(PM)的不利影响影响亚细胞水平的根生长,细胞质,和核。在下午,铝改变了渗透率,流动性,和完整性在短短0.5h,同时它也使PM去极化并降低H()-ATPase活性。Al可能在0.5小时内穿过PM,在那里它能够与细胞核结合并抑制细胞分裂;需要在液泡内隔离以减少Al在细胞质内的毒性作用。这篇综述表明,越来越多的证据表明,最初的铝诱导抑制壁松动的重要性,但是也有证据表明Al对其他细胞过程的有害作用,这对长期根的生长和功能很重要。
    Acid soils with elevated levels of soluble aluminium (Al) comprise ~40% of the world\'s arable land, but there remains much uncertainty regarding the mechanisms by which Al is rhizotoxic. This review examines the kinetics of the toxic effects of Al on the root elongation rate (RER), its effects on root tissues, and its location at a subcellular level. Depending upon the concentration and plant species, soluble Al decreases the RER in a median time of 73min, but in as little as 5min in soybean. This is initially due to a decreased rate at which cells expand anisotropically in the elongation zone. Thereafter, rhizodermal and outer cortical cells rupture through decreased cell wall relaxation. It is in this region where most Al accumulates in the apoplast. Subsequently, Al impacts root growth at a subcellular level through adverse effects on the plasma membrane (PM), cytoplasm, and nucleus. At the PM, Al alters permeability, fluidity, and integrity in as little as 0.5h, whilst it also depolarizes the PM and reduces H(+)-ATPase activity. The Al potentially crosses the PM within 0.5h where it is able to bind to the nucleus and inhibit cell division; sequestration within the vacuole is required to reduce the toxic effects of Al within the cytoplasm. This review demonstrates the increasing evidence of the importance of the initial Al-induced inhibition of wall loosening, but there is evidence also of the deleterious effects of Al on other cellular processes which are important for long-term root growth and function.
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  • 文章类型: Journal Article
    Retrograde signaling, defined as the signaling events leading from the plastids to the nucleus, coordinates the expression of plastid and nuclear genes and is crucial for metabolic as well as developmental processes of the plastids. In the recent past, the identification of various components that are involved in the generation and transmission of plastid-originated retrograde signals and the regulation of nuclear gene expression has only provided a glimpse of the plastid retrograde signaling network, which remains poorly understood. The basic assumptions underlying our current understanding of retrograde signaling stayed untouched for many years. Therefore, an attempt has been made in this review article to summarize established facts and recent advances regarding various retrograde signaling pathways derived from different sources, the identification of key elements mediating retrograde signal transduction and also to give an overview of possible signaling molecules that remain to be investigated.
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