MENDELIAN RANDOMIZATION

孟德尔随机化
  • 文章类型: Journal Article
    目的:鉴于Lp(a)在心血管疾病中的因果作用的巩固证据,意大利动脉粥样硬化研究学会(SISA)就Lp(a)遗传学和流行病学达成了共识,以及对其测量的建议以及降低其血浆水平的当前和新兴治疗方法。还提供了有关意大利人口的数据。
    结果:Lp(a)由一个apo(a)分子和与低密度脂蛋白(LDL)非常相似的脂蛋白组成。它与低密度脂蛋白相似,连同其携带氧化磷脂的能力一起被认为是使Lp(a)对心血管健康有害的两个主要特征。血浆Lp(a)浓度在人类中变化约1000倍,并且是遗传决定的,因此,它们在任何个体中都相当稳定。孟德尔随机研究表明,Lp(a)在动脉粥样硬化性心血管疾病(ASCVD)和主动脉瓣狭窄中具有因果关系,观察性研究表明,心血管疾病与Lp(a)血浆水平之间存在线性直接相关。强烈建议在患者一生中进行一次Lp(a)测量,特别是在FH科目中,但也作为初始脂质筛查的一部分,以评估心血管风险。apo(a)大小多态性代表了血浆中Lp(a)测量的挑战,但是新的战略正在克服这些困难。Lp(a)水平的降低目前只能通过血浆单采术来实现,适度,用PCSK9抑制剂治疗。
    结论:正在等待选择性Lp(a)降低药物的批准,强烈建议对Lp(a)水平升高的个体进行其他危险因素的强化管理.
    In view of the consolidating evidence on the causal role of Lp(a) in cardiovascular disease, the Italian Society for the Study of Atherosclerosis (SISA) has assembled a consensus on Lp(a) genetics and epidemiology, together with recommendations for its measurement and current and emerging therapeutic approaches to reduce its plasma levels. Data on the Italian population are also provided.
    Lp(a) is constituted by one apo(a) molecule and a lipoprotein closely resembling to a low-density lipoprotein (LDL). Its similarity with an LDL, together with its ability to carry oxidized phospholipids are considered the two main features making Lp(a) harmful for cardiovascular health. Plasma Lp(a) concentrations vary over about 1000 folds in humans and are genetically determined, thus they are quite stable in any individual. Mendelian Randomization studies have suggested a causal role of Lp(a) in atherosclerotic cardiovascular disease (ASCVD) and aortic valve stenosis and observational studies indicate a linear direct correlation between cardiovascular disease and Lp(a) plasma levels. Lp(a) measurement is strongly recommended once in a patient\'s lifetime, particularly in FH subjects, but also as part of the initial lipid screening to assess cardiovascular risk. The apo(a) size polymorphism represents a challenge for Lp(a) measurement in plasma, but new strategies are overcoming these difficulties. A reduction of Lp(a) levels can be currently attained only by plasma apheresis and, moderately, with PCSK9 inhibitor treatment.
    Awaiting the approval of selective Lp(a)-lowering drugs, an intensive management of the other risk factors for individuals with elevated Lp(a) levels is strongly recommended.
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  • 文章类型: Journal Article
    基因组学驱动的药物发现对于加速新型治疗靶标的开发是必不可少的。然而,基于全基因组关联研究(GWAS)证据的药物发现框架尚未建立,特别是跨人群GWAS荟萃分析。这里,我们介绍了基因组学驱动的药物发现的实用指南,用于跨群体荟萃分析,作为全球生物库荟萃分析计划(GBMI)的经验教训。我们的药物发现框架包括三种方法,并应用于GBMI靶向的13种常见疾病(N均值=1,329,242)。个别方法互补地优先考虑药物和药物靶标,通过参考先前已知的药物-疾病关系进行了系统验证。三种方法的整合提供了用于重新定位的候选药物的全面目录,针对静脉血栓栓塞的凝血过程中涉及的基因和痛风的白细胞介素-4和白细胞介素-13信号通路,提名有希望的候选药物。我们的研究强调了使用跨群体荟萃分析成功的基因组学驱动药物发现的关键因素。
    Genomics-driven drug discovery is indispensable for accelerating the development of novel therapeutic targets. However, the drug discovery framework based on evidence from genome-wide association studies (GWASs) has not been established, especially for cross-population GWAS meta-analysis. Here, we introduce a practical guideline for genomics-driven drug discovery for cross-population meta-analysis, as lessons from the Global Biobank Meta-analysis Initiative (GBMI). Our drug discovery framework encompassed three methodologies and was applied to the 13 common diseases targeted by GBMI (N mean = 1,329,242). Individual methodologies complementarily prioritized drugs and drug targets, which were systematically validated by referring previously known drug-disease relationships. Integration of the three methodologies provided a comprehensive catalog of candidate drugs for repositioning, nominating promising drug candidates targeting the genes involved in the coagulation process for venous thromboembolism and the interleukin-4 and interleukin-13 signaling pathway for gout. Our study highlighted key factors for successful genomics-driven drug discovery using cross-population meta-analyses.
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  • 文章类型: Journal Article
    本文提供了进行孟德尔随机化研究的指南。它的目标是寻求进行分析并写下他们的发现的从业者,以及寻求评估孟德尔随机化手稿的期刊编辑和审稿人。指南分为九个部分:动机和范围,数据源,遗传变异的选择,变体协调,初步分析,补充和敏感性分析(一节关于稳健的统计方法,一节关于其他方法),数据呈现,和解释。这些准则将根据社区的反馈和该领域的进展进行更新。将根据需要定期进行更新,至少每18个月。
    This paper provides guidelines for performing Mendelian randomization investigations. It is aimed at practitioners seeking to undertake analyses and write up their findings, and at journal editors and reviewers seeking to assess Mendelian randomization manuscripts. The guidelines are divided into ten sections: motivation and scope, data sources, choice of genetic variants, variant harmonization, primary analysis, supplementary and sensitivity analyses (one section on robust statistical methods and one on other approaches), extensions and additional analyses, data presentation, and interpretation. These guidelines will be updated based on feedback from the community and advances in the field. Updates will be made periodically as needed, and at least every 24 months.
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  • 文章类型: Journal Article
    Mendelian randomization (MR) analyses have been increasingly used to seek evidence of causal associations. This systematic review aims at characterizing and evaluating the reporting of MR analyses in oncological studies.
    The PubMed database was searched to identify MR cancer studies until December 31, 2017. Two of the authors independently selected and evaluated reporting quality of the studies. Reporting quality in MR studies before 2016 and in 2016/17 was compared.
    Cancer studies with MR analyses in 2016 and 2017 accounted for 55.8% of the total number of studies identified. In the 77 eligible articles, 39 (50.6%) did not report subjects\' characteristics, 53 (68.8%) did not conduct power estimation, 40 (51.9%) did not state all of the first three MR assumptions (i.e., genetic instrument is associated with exposure, is not associated with confounders, and acts on outcome only through exposure), and 31 (40.3%) did not exclude SNPs that diverged from Hardy-Weinberg equilibrium. More studies estimated power in 2016/2017 than before 2016 (p = 0.028).
    Some MR cancer studies did not sufficiently report essential information, posing obstacles for critical appraisal. This study proposes for MR analysis a guideline/checklist for future publications in cancer and other biomedical research.
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  • 文章类型: Journal Article
    UNASSIGNED: To appraise the clinical and genetic evidence that low-density lipoproteins (LDLs) cause atherosclerotic cardiovascular disease (ASCVD).
    UNASSIGNED: We assessed whether the association between LDL and ASCVD fulfils the criteria for causality by evaluating the totality of evidence from genetic studies, prospective epidemiologic cohort studies, Mendelian randomization studies, and randomized trials of LDL-lowering therapies. In clinical studies, plasma LDL burden is usually estimated by determination of plasma LDL cholesterol level (LDL-C). Rare genetic mutations that cause reduced LDL receptor function lead to markedly higher LDL-C and a dose-dependent increase in the risk of ASCVD, whereas rare variants leading to lower LDL-C are associated with a correspondingly lower risk of ASCVD. Separate meta-analyses of over 200 prospective cohort studies, Mendelian randomization studies, and randomized trials including more than 2 million participants with over 20 million person-years of follow-up and over 150 000 cardiovascular events demonstrate a remarkably consistent dose-dependent log-linear association between the absolute magnitude of exposure of the vasculature to LDL-C and the risk of ASCVD; and this effect appears to increase with increasing duration of exposure to LDL-C. Both the naturally randomized genetic studies and the randomized intervention trials consistently demonstrate that any mechanism of lowering plasma LDL particle concentration should reduce the risk of ASCVD events proportional to the absolute reduction in LDL-C and the cumulative duration of exposure to lower LDL-C, provided that the achieved reduction in LDL-C is concordant with the reduction in LDL particle number and that there are no competing deleterious off-target effects.
    UNASSIGNED: Consistent evidence from numerous and multiple different types of clinical and genetic studies unequivocally establishes that LDL causes ASCVD.
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