FAIR

FAIR
  • 文章类型: Journal Article
    作者在本文中调查了FHIR资源采用的现状,以使医学研究领域的数据更加合理。通过与FAIR数据原则保持一致,数据变得更容易共享和重用。这篇综述旨在分析整合FHIR资源如何提高可查找性,可访问性,互操作性,和数据集的可重用性。通过寻找这一领域的最新情况,我们想强调FAIR数据在医学研究界的重要作用,还为进一步发展和提高互操作性提供了方向。
    The authors investigate in this paper the current situation of the FHIR resources adoption in order to FAIRify data in the medical research field. By aligning with the FAIR data principles, data becomes easier to share and reuse. This review aims to analyze how integrating the FHIR resources improved the findability, accessibility, interoperability, and reusability of datasets. By searching for the state-of-art situation in this field, we want to emphasize the significant role that FAIR data occupies in the medical research community, by also providing directions for further development and improved interoperability.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    Open science (OS) awareness and skills are increasingly becoming an essential part of everyday scientific work as e.g., many journals require authors to share data. However, following an OS workflow can seem challenging at first. Thus, instructions by journals and other guidelines are important. But how comprehensive are they in the field of ecology and evolutionary biology (Ecol Evol)? To find this out, we reviewed 20 published OS guideline articles aimed for ecologists or evolutionary biologists, together with the data policies of 17 Ecol Evol journals to chart the current landscape of OS guidelines in the field, find potential gaps, identify field-specific barriers for OS and discuss solutions to overcome these challenges. We found that many of the guideline articles covered similar topics, despite being written for a narrow field or specific target audience. Likewise, many of the guideline articles mentioned similar obstacles that could hinder or postpone a transition to open data sharing. Thus, there could be a need for a more widely known, general OS guideline for Ecol Evol. Following the same guideline could also enhance the uniformity of the OS practices carried on in the field. However, some topics, like long-term experiments and physical samples, were mentioned surprisingly seldom, although they are typical issues in Ecol Evol. Of the journals, 15 out of 17 expected or at least encouraged data sharing either for all articles or under specific conditions, e.g. for registered reports and 10 of those required data sharing at the submission phase. The coverage of journal data policies varied greatly between journals, from practically non-existing to very extensive. As journals can contribute greatly by leading the way and making open data useful, we recommend that the publishers and journals would invest in clear and comprehensive data policies and instructions for authors.
    Avoimen tieteen ymmärrys ja taitojen hallinta on yhä tärkeämpi osa tutkijan arkea, sillä esimerkiksi monet tieteelliset lehdet odottavat aineiston avointa jakamista. Avoimen tieteen työtapojen noudattaminen voi kuitenkin tuntua alkuun haastavalta, minkä vuoksi esimerkiksi tieteellisten lehtien ja muiden tahojen laatimat ohjeet ovat tärkeitä. Mutta kuinka kattavia ne ovat ekologian ja evoluutiobiologian alalla? Kävimme läpi 20 julkaistua ekologeille tai evoluutiobiologeille suunnattua avoimen tieteen ohjeistusta sekä 17 ekologian ja evoluutiobiologian tieteellisen lehden datakäytännöt, tarkoituksenamme kartoittaa alojen avoimen tieteen ohjeiden nykytilaa, löytää mahdollisia puutteita, tunnistaa alakohtaisia esteitä avoimen tieteen käytäntöjen toteutumiselle sekä keskustella ratkaisuista, joilla nämä haasteet voitaisiin ratkaista. Havaitsimme, että monet ohjeistukset käsittelivät samankaltaisia aiheita, vaikka ne oli tarkoitettu kapealle erityisalalle tai suunnattu hyvin rajoitetulle kohderyhmälle. Samoin monissa ohjeistuksissa mainittiin samankaltaisia aineistojen avoimen jakamisen hidastamista tai estämistä aiheuttavia haasteita. Toiset aiheet, kuten pitkäaikaiskokeet ja fyysiset näytteet, sen sijaan mainittiin yllättävän harvoin, vaikka niissä on tyypillisiä ekologian ja evoluutiobiologian alojen haasteita. Tieteellisistä lehdistä 15:ssä 17:sta vaadittiin tai vähintään kannustettiin jakamaan aineisto avoimesti joko kaikkien artikkelien osalta tai tietyin edellytyksin, esim. rekisteröityjen tutkimusraporttien osalta. Lisäksi 10 näistä lehdistä edellytti aineiston avointa jakamista jo submittointivaiheessa. Tieteellisten lehtien aineisto‐ohjeiden kattavuus vaihteli suuresti lehtien välillä, käytännössä olemattomasta hyvin laajaan. Koska tieteellisillä lehdillä on suuri vaikutusvalta avoimen tieteen käytäntöjen edistämiseen, suosittelemme kustantajia ja lehtiä panostamaan selkeisiin ja kattaviin aineistolinjauksiin ja ohjeistuksiin.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Systematic Review
    在描述性感官评价方法中,时间方法在食品科学中具有广泛的受众,因为它们可以使感知尽可能接近感知的时刻。这项工作的目的是通过使用系统的范围审查来绘制科学文献,从而描述涉及时间方法的30年研究。因此,包括从1991年至2022年在Scopus和WebofScience中搜索的363篇研究文章。提取的数据包括有关使用时间方法进行研究的信息(与受试者有关的详细信息,产品,描述符,研究设计,数据分析,等。),使用它们的原因以及它们允许得出的结论。还进行了元数据分析和批判性评估。对结果进行定量和定性综合,可以确定方法开发的趋势,精致,并传播。总的来说,在进行时间测量和结果呈现的方式中,我们注意到了很大的异质性.在建立时间方法的有效性和可靠性方面,还发现了一些关键的研究空白。它们主要与方法的实施细节有关(例如,研究中包括的消费者数量几乎没有理由,缺乏面板可重复性报告)和数据分析(例如,使用探索性数据分析的普遍性,只有20%的研究使用验证性分析,考虑到数据的动态性质)。这些结果表明,需要关于如何实施该方法的一般准则,分析和解释数据,并报告结果。因此,我们提出了报告数据和结果的模板和检查表,以帮助提高未来研究的质量.
    Among descriptive sensory evaluation methods, temporal methods have a wide audience in food science because they make it possible to follow perception as close as possible to the moment when sensations are perceived. The aim of this work was to describe 30 years of research involving temporal methods by mapping the scientific literature using a systematic scoping review. Thus, 363 research articles found from a search in Scopus and Web of Science from 1991 to 2022 were included. The extracted data included information on the implementation of studies referring to the use of temporal methods (details related to subjects, products, descriptors, research design, data analysis, etc.), reasons why they were used and the conclusions they allowed to be drawn. Metadata analysis and critical appraisal were also carried out. A quantitative and qualitative synthesis of the results allowed the identification of trends in the way in which the methods were developed, refined, and disseminated. Overall, a large heterogeneity was noted in the way in which the temporal measurements were carried out and the results presented. Some critical research gaps in establishing the validity and reliability of temporal methods have also been identified. They were mostly related to the details of implementation of the methods (e.g., almost no justification for the number of consumers included in the studies, absence of report on panel repeatability) and data analysis (e.g., prevalence of use of exploratory data analysis, only 20% of studies using confirmatory analyses considering the dynamic nature of the data). These results suggest the need for general guidelines on how to implement the method, analyze and interpret data, and report the results. Thus, a template and checklist for reporting data and results were proposed to help increase the quality of future research.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    围绕跨性别女性参与女性体育类别是否公平的辩论,特别是与顺式女性相比,由于睾丸激素增加而保留的男性生理优势。最近,个别体育组织一直在调查和评估有关跨性别女性运动员参与女性类别的政策,导致一些禁止参与。这篇综述旨在讨论科学证据,并为将跨性别女性纳入精英竞技女性击剑类别提供适当的指导。击剑是一种间歇性运动,比赛可以持续1到3天。弓步是攻击对手最常见的动作,成功的命中依赖于行动的速度。男性青春期诱导的循环睾酮增加促进更高的身材,心血管功能,肌肉质量,与顺式女性相比,达到约12-40%的运动性能优势。优秀的cisgender男性击剑运动员表现明显更高,~17-30%,与精英女性击剑运动员相比,跳高和腿部力量措施,导致更快的弓步。接受雄激素抑制治疗12个月的跨性别妇女的力量显着下降,瘦体重,和肌肉表面积,但即使36个月后,这三个指数的测量值仍高于顺性女性。以前的男性肌肉质量和力量可以通过持续的阻力训练来保留。文献综述表明,参加精英竞技女性击剑类别时,经历男性青春期的跨性别女性保留了生理优势。针对精英击剑比赛的公开或第三性别类别的拟议解决方案促进了公平竞争,同时允许跨性别女性参加他们选择的运动。
    Debate has surrounded whether the participation of trans women in female sporting categories is fair, specifically the retained male physiological advantage due to increased testosterone compared to cisgender females. Recently, individual sporting organisations have been investigating and assessing policies regarding trans women athlete participation in female categories, resulting in several banning participation. This review aims to discuss the scientific evidence and provide appropriate guidance for the inclusion of trans women in elite competitive female fencing categories. Fencing is an intermittent sport, where competitions can span 1 to 3 days. The lunge is the most common movement used to attack opponents, where a successful hit relies on the speed of the action. Male puberty induced increased circulating testosterone promotes a greater stature, cardiovascular function, muscle mass, and strength compared to cisgender females, culminating in a ~12-40% sport performance advantage. Elite cisgender male fencers perform significantly higher, ~17-30%, jump heights and leg power measures compared to elite cisgender female fencers, resulting in faster lunges. Trans women receiving androgen-suppression therapy for 12 months showed significant reductions in strength, lean body mass, and muscle surface area, but even after 36 months, the measurements of these three indices remained above those for cisgender females. Previous male muscle mass and strength can be retained through continuation of resistance training. The literature reviewed shows that there is a retained physiological advantage for trans women who have undergone male puberty when participating in the elite competitive female fencing category. A proposed solution of an open or third gender category for elite fencing competition promotes fair competition, while allowing trans women to compete in their chosen sport.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Systematic Review
    随着机器学习领域的最新进展,健康合成数据已成为一种有前途的技术,以解决在访问和使用电子医疗记录进行研究和创新时消耗时间的困难。然而,健康综合数据的效用和治理尚未得到广泛研究。根据PRISMA指南,进行了范围审查,以了解健康综合数据的评估和治理状况。结果表明,如果通过适当的方法生成合成健康数据,隐私泄露的风险一直很低,数据质量与真实数据相比。然而,健康综合数据的生成是在个案基础上生成的,而不是扩大规模。此外,法规,伦理,健康综合数据的数据共享主要是不明确的,尽管共享此类数据的共同原则确实存在。
    With the recent advancement in the field of machine learning, health synthetic data has become a promising technique to address difficulties with time consumption when accessing and using electronic medical records for research and innovations. However, health synthetic data utility and governance have not been extensively studied. A scoping review was conducted to understand the status of evaluations and governance of health synthetic data following the PRISMA guidelines. The results showed that if synthetic health data are generated via proper methods, the risk of privacy leaks has been low and data quality is comparative to real data. However, the generation of health synthetic data has been generated on a case-by-case basis instead of being scaled up. Furthermore, regulations, ethics, and data sharing of health synthetic data have primarily been inexplicit, although common principles for sharing such data do exist.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    BACKGROUND: The FAIR (Findable, Accessible, Interoperable, Reusable) principles were proposed in 2016 to set a path towards reusability of research datasets. In this systematic review, we assessed the FAIRness of datasets associated with peer-reviewed articles in veterinary epidemiology research published since 2017, specifically looking at salmonids and dairy cattle. We considered the differences in practices between molecular epidemiology, the branch of epidemiology using genetic sequences of pathogens and hosts to describe disease patterns, and non-molecular epidemiology.
    RESULTS: A total of 152 articles were included in the assessment. Consistent with previous assessments conducted in other disciplines, our results showed that most datasets used in non-molecular epidemiological studies were not available (i.e., neither findable nor accessible). Data availability was much higher for molecular epidemiology papers, in line with a strong repository base available to scientists in this discipline. The available data objects generally scored favourably for Findable, Accessible and Reusable indicators, but Interoperability was more problematic.
    CONCLUSIONS: None of the datasets assessed in this study met all the requirements set by the FAIR principles. Interoperability, in particular, requires specific skills in data management which may not yet be broadly available in the epidemiology community. In the discussion, we present recommendations on how veterinary research could move towards greater reusability according to FAIR principles. Overall, although many initiatives to improve data access have been started in the research community, their impact on the availability of datasets underlying published articles remains unclear to date.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

公众号