Copper

  • 文章类型: Journal Article
    背景:微量元素和维生素,一起命名为微量营养素(MNs),对人体新陈代谢至关重要。最近的研究认识到MNs在常见病理中的重要性,缺陷显著影响结果。
    目的:本指南的简短版本旨在为临床实践提供实用建议。
    方法:在Medline数据库中进行了广泛的文献搜索,PubMed,科克伦,谷歌学者,和CINAHL为初始指南。搜索的重点是生理数据,历史证据(适用于PubMed在1996年发布之前发表的论文),以及观察性和/或随机试验。对于每个MN,主要功能,最优分析方法,炎症的影响,潜在毒性,并在肠内或肠外营养期间提供营养。SOP措辞是为了加强建议。
    结果:介入试验数量有限,阻碍了荟萃分析,导致大多数建议的证据水平较低。这些建议经历了一个协商一致的过程,这导致了一定比例的协议(%):超过90%的选票需要强有力的共识。该准则总共为26个MN提出了3项一般性建议和具体建议。提出了监测和管理策略。
    结论:这个简短版本的MN指南应该有助于处理高危疾病中的MN,同时就营养支持期间的MN提供和监测提供实用建议。
    Trace elements and vitamins, named together micronutrients (MNs), are essential for human metabolism. The importance of MNs in common pathologies is recognized by recent research, with deficiencies significantly impacting the outcome.
    This short version of the guideline aims to provide practical recommendations for clinical practice.
    An extensive search of the literature was conducted in the databases Medline, PubMed, Cochrane, Google Scholar, and CINAHL for the initial guideline. The search focused on physiological data, historical evidence (for papers published before PubMed release in 1996), and observational and/or randomized trials. For each MN, the main functions, optimal analytical methods, impact of inflammation, potential toxicity, and provision during enteral or parenteral nutrition were addressed. The SOP wording was applied for strength of recommendations.
    The limited number of interventional trials prevented meta-analysis and led to a low level of evidence for most recommendations. The recommendations underwent a consensus process, which resulted in a percentage of agreement (%): strong consensus required of >90 % of votes. Altogether the guideline proposes 3 general recommendations and specific recommendations for the 26 MNs. Monitoring and management strategies are proposed.
    This short version of the MN guideline should facilitate handling of the MNs in at-risk diseases, whilst offering practical advice on MN provision and monitoring during nutritional support.
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  • 文章类型: Journal Article
    了解海洋微生物对环境干扰的快速反应对于支持早期评估对高价值生态系统的危害至关重要,比如珊瑚礁。然而,旨在保护水生生物免受环境污染的管理准则仍然专门针对较高营养级的生物。在这项研究中,16SrRNA基因扩增子测序与单叠氮丙啶一起用于细胞活力评估,作为确定铜(Cu)暴露下海水微生物群落中分类单元和群落水平变化的敏感工具。贝叶斯模型平均用于建立浓度-响应关系,以评估铜对微生物组成的影响,多样性,和丰富度,用于估计微生物组危害浓度(mHCx)值。微生物组成变化5%的预测mHC5值,多样性,和丰富度分别为1.05、0.72和0.38μgCuL-1。在铜浓度上应用阈值指示类群分析,以确定用于降低类群的类群特异性变化点。然后将这些变化点用于产生原核敏感性分布(PSD),从中得出铜的mHCxdec值,适用于保护99、95、90和80%的海洋微生物组。mHC5dec指导值为0.61μgCuL-1,保护95%的海洋微生物群落,低于基于较高营养水平的真核生物的等效澳大利亚水质指导值。这表明海洋微生物群落可能更脆弱,强调了它们在防止铜污染方面的潜在不足。此处提出的mHCx值提供了定量评估污染物对微生物群落影响的方法,以将原核生物纳入未来的水质准则。
    Understanding the rapid responses of marine microbiomes to environmental disturbances is paramount for supporting early assessments of harm to high-value ecosystems, such as coral reefs. Yet, management guidelines aimed at protecting aquatic life from environmental pollution remain exclusively defined for organisms at higher trophic levels. In this study, 16S rRNA gene amplicon sequencing was applied in conjunction with propidium monoazide for cell-viability assessment as a sensitive tool to determine taxon- and community-level changes in a seawater microbial community under copper (Cu) exposure. Bayesian model averaging was used to establish concentration-response relationships to evaluate the effects of copper on microbial composition, diversity, and richness for the purpose of estimating microbiome Hazard Concentration (mHCx) values. Predicted mHC5 values at which a 5 % change in microbial composition, diversity, and richness occurred were 1.05, 0.72, and 0.38 μg Cu L-1, respectively. Threshold indicator taxa analysis was applied across the copper concentrations to identify taxon-specific change points for decreasing taxa. These change points were then used to generate a Prokaryotic Sensitivity Distribution (PSD), from which mHCxdec values were derived for copper, suitable for the protection of 99, 95, 90, and 80 % of the marine microbiome. The mHC5dec guideline value of 0.61 μg Cu L-1, protective of 95 % of the marine microbial community, was lower than the equivalent Australian water quality guideline value based on eukaryotic organisms at higher trophic levels. This suggests that marine microbial communities might be more vulnerable, highlighting potential insufficiencies in their protection against copper pollution. The mHCx values proposed here provide approaches to quantitatively assess the effects of contaminants on microbial communities towards the inclusion of prokaryotes in future water quality guidelines.
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  • 文章类型: Journal Article
    作为一种高度恶性的肿瘤,皮肤黑色素瘤(CM)的发病率和死亡率逐年上升。一种与线粒体代谢有关的新型细胞死亡称为角化凋亡。角化调节肿瘤生物学行为。因此,控制角化凋亡的基因可能是癌症治疗的有希望的候选生物指标。从包括临床信息和RNA-seq数据的公共数据库获得CM患者的数据集。我们通过无监督聚类方法将CM患者分为三个不同的亚组,并通过GSVA探索三个亚组之间功能通路的差异,以证明铜死亡相关基因在CM形成和发展中的可能潜在机制。其次,我们使用差异分析和Cox回归分析来找到与预后相关的差异基因,构建了CRG评分,找到了CRG评分高、低组的临界评分,然后分析CRG评分高、低组的预后和免疫浸润情况。结果表明,OS和CRG评分之间存在很大的相关性。与CRG评分高的患者相比,CRG评分低的患者生存率明显较高.一句话,铜的流挂对CM的进步起着必定的感化。
    As a highly malignant tumor, the morbidity and mortality of cutaneous melanoma (CM) are increasing year by year. A novel type of cell death connected to mitochondrial metabolism is called cuproptosis. Cuproptosis regulates tumor biological behavior. Thus, genes controlling cuproptosis could be a promising candidate bioindicator for cancer therapy. Datasets of CM patients were obtained from the public database that includes clinical information and RNA-seq data. We divided CM patients into three different subgroups by unsupervised clustering method and explored the differences in functional pathways among the three subgroups by GSVA to prove the possible potential mechanism of copper death-related genes in the formation and development of CM. Secondly, we used differential analysis and Cox regression analysis to find the differential genes related to prognosis, constructed the CRG score, found the critical score for dividing high and low CRG score groups, and then analyzed the prognosis and immune infiltration of high and low CRG score groups. The results show a great correlation between OS and CRG scores. Compared with patients with high CRG scores, patients with low CRG scores have a significantly higher survival rate. In a word, copper sagging plays a certain role in the progress of CM.
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  • 文章类型: Journal Article
    微量元素和维生素,一起命名为微量营养素(MNs),对人体新陈代谢至关重要。最近的研究表明,MNs在常见病理中的重要性,具有影响结果的重大缺陷。
    本指南旨在为每日临床营养实践提供有关MN状态评估的信息。监测,和处方。它提出了一个协商一致的术语,由于许多单词使用不准确,造成混乱。“不足”一词尤其如此,\"重新完成\",\"补码\",和“补充”。
    专家组试图将2015年标准操作程序(SOP)应用于ESPEN,重点关注疾病。然而,由于多种疾病需要临床营养,导致每个MN都有一个文本,因此无法应用此方法。而不是疾病。在Medline数据库中对文献进行了广泛的搜索,PubMed,科克伦,谷歌学者,和CINAHL。搜索的重点是生理数据,历史证据(在1996年PubMed发布之前发布),以及观察性和/或随机试验。对于每个MN,主要功能,最优分析方法,炎症的影响,潜在毒性,并在肠内或肠外营养期间提供营养。SOP措辞是为了加强建议。
    介入试验数量有限,防止荟萃分析,导致证据水平低。这些建议经历了一个协商一致的过程,这导致了一定比例的协议(%):超过90%的选票需要强有力的共识。该指南总共为26个MN提出了一系列建议,产生170个单一的建议。在许多急性和慢性疾病中发现了严重的MN存在缺陷。提出了监测和管理策略。
    本指南应能够解决高危疾病中一组MNs的次优和缺陷状态。特别是,它为营养支持期间的MN提供和监测提供实用建议。
    Trace elements and vitamins, named together micronutrients (MNs), are essential for human metabolism. Recent research has shown the importance of MNs in common pathologies, with significant deficiencies impacting the outcome.
    This guideline aims to provide information for daily clinical nutrition practice regarding assessment of MN status, monitoring, and prescription. It proposes a consensus terminology, since many words are used imprecisely, resulting in confusion. This is particularly true for the words \"deficiency\", \"repletion\", \"complement\", and \"supplement\".
    The expert group attempted to apply the 2015 standard operating procedures (SOP) for ESPEN which focuses on disease. However, this approach could not be applied due to the multiple diseases requiring clinical nutrition resulting in one text for each MN, rather than for diseases. An extensive search of the literature was conducted in the databases Medline, PubMed, Cochrane, Google Scholar, and CINAHL. The search focused on physiological data, historical evidence (published before PubMed release in 1996), and observational and/or randomized trials. For each MN, the main functions, optimal analytical methods, impact of inflammation, potential toxicity, and provision during enteral or parenteral nutrition were addressed. The SOP wording was applied for strength of recommendations.
    There was a limited number of interventional trials, preventing meta-analysis and leading to a low level of evidence. The recommendations underwent a consensus process, which resulted in a percentage of agreement (%): strong consensus required of >90% of votes. Altogether the guideline proposes sets of recommendations for 26 MNs, resulting in 170 single recommendations. Critical MNs were identified with deficiencies being present in numerous acute and chronic diseases. Monitoring and management strategies are proposed.
    This guideline should enable addressing suboptimal and deficient status of a bundle of MNs in at-risk diseases. In particular, it offers practical advice on MN provision and monitoring during nutritional support.
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  • 文章类型: Journal Article
    一个重要的问题是,通过计算和光谱方法产生的铜单加氧酶(例如肽基甘氨酸单加氧酶(PHM)和多巴胺β-单加氧酶(DBM))的共识机制是否可以解释重要的实验观察结果。我们根据最近的晶体学和QMMM报告研究了这个问题,这些报告表明,涉及开放到封闭的构象循环的替代机制可能更能代表许多实验发现,而这些实验发现在规范的单核机制中仍未得到解释。这些包括(i)在没有底物的情况下,催化铜位点(CuM)与氧的反应性几乎可以忽略不计,(ii)羰基化学,特别是底物诱导的活化,例如降低的CO拉伸频率,(iii)过氧化物分流化学需要促进Cu(II)-过氧态和Cu(I)-双氧态之间平衡的中间体,和(iv)PHM和DBM中封闭和开放构象状态的明确证据。一种涉及通过开放到封闭的构象转变形成的双核铜中间体的替代机制似乎能够更好地适应这些实验观察,以及通过QMMM方法证明是积极可行的。这表明未来的实验应该设计为区分这些竞争机制和控制铜中心氧反应性的因素。特别是,确定氧反应性如何通过底物的结合而激活,应该被认为是一个重要的新挑战。
    An important question is whether consensus mechanisms for copper monooxygenase enzymes such as peptidylglycine monooxygenase (PHM) and dopamine β-monooxygenase (DBM) generated via computational and spectroscopic approaches account for important experimental observations. We examine this question in the light of recent crystallographic and QMMM reports which suggest that alternative mechanisms involving an open to closed conformational cycle may be more representative of a number of experimental findings that remain unaccounted for in the canonical mononuclear mechanisms. These include (i) the almost negligible reactivity of the catalytic copper site (CuM) with oxygen in the absence of substrate, (ii) the carbonyl chemistry and in particular the substrate-induced activation exemplified by the lowered CO stretching frequency, (iii) the peroxide shunt chemistry which demands an intermediate that facilitates equilibrium between a Cu(II)-peroxo state and a Cu(I)-dioxygen state, and (iv) clear evidence for both closed and open conformational states in both PHM and DBM. An alternative mechanism involving a dinuclear copper intermediate formed via an open to closed conformational transition appears better able to accommodate these experimental observations, as well as being shown by QMMM methodologies to be energetically feasible. This suggests that future experiments should be designed to distinguish between these competing mechanisms and the factors that govern the oxygen reactivity of the copper centers. In particular, determining how oxygen reactivity is activated by binding of substrate, should be considered an important new challenge.
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  • 文章类型: Journal Article
    Four distinctive sets of optimum nitroxyl radical/copper salt/additive catalyst combinations have been identified for accommodating the aerobic oxidation of various types of primary alcohols to their corresponding aldehydes. Interestingly, less nucleophilic catalysts exhibited higher catalytic activities for the oxidation of particular primary allylic and propargylic alcohols to give α,β-unsaturated aldehydes that function as competent Michael acceptors. The optimum conditions identified herein were successful in the oxidation of various types of primary alcohols, including unprotected amino alcohols and divalent-sulfur-containing alcohols in good-to-high yields. Moreover, N-protected alaninol, an inefficient substrate in the nitroxyl radical/copper-catalyzed aerobic oxidation, was oxidized in good yield. On the basis of the optimization results, a guideline for catalyst selection has been established.
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  • 文章类型: Journal Article
    六种热带淡水物种被用来评估澳大利亚北部世界遗产地区附近铀矿的矿井水的毒性。该矿潜在关注的主要污染物是美国,Mg,Mn,和总氨氮(TAN)。进行了直接毒性评估,以评估已建立的针对单个污染物的特定地点指导值是否对作为混合物存在的污染物具有保护作用。计算污染物的金属形态,以确定哪些是毒性的主要贡献者,其中84%至96%的Mg以自由离子形式预测为Mg2+,76-92%的Mn预测为Mn2+。铀,Al,和铜被预测与富里酸强烈结合。铀,Mg,Mn,将Cu和Cu掺入浓度添加或独立作用混合物毒性模型中,以将每种水中观察到的毒性与预测的毒性进行比较。对于>90%的数据,矿井水毒性小于浓度添加模型预测。除一种情况外,毒性大于预期的情况伴随着单个金属指导值的超标(即,aMg浓度在指导值的10%以内)。这表明美国现有的个别水质指导值,Mg,Mn,TAN将充分保护矿山下游的生态系统。环境毒物化学2021;40:2334-2346。©2021澳大利亚联邦。环境毒理学和化学©2021SETAC。
    Six tropical freshwater species were used to assess the toxicity of mine waters from a uranium mine adjacent to a World Heritage area in northern Australia. Key contaminants of potential concern for the mine were U, Mg, Mn, and total ammonia nitrogen (TAN). Direct toxicity assessments were carried out to assess whether the established site-specific guideline values for individual contaminants would be protective with the contaminants occurring as mixtures. Metal speciation was calculated for contaminants to determine which were the major contributors of toxicity, with 84 to 96% of Mg predicted in the free-ion form as Mg2+ , and 76 to 92% of Mn predicted as Mn2+ . Uranium, Al, and Cu were predicted to be strongly bound to fulvic acid. Uranium, Mg, Mn, and Cu were incorporated into concentration addition or independent action mixture toxicity models to compare the observed toxicity in each of the waters with predicted toxicity. For >90% of the data, mine-water toxicity was less than predicted by the concentration addition model. Instances where toxicity was greater than predicted were accompanied by exceedances of individual metal guideline values in all but one case (i.e., a Mg concentration within 10% of the guideline value). This indicates that existing individual water quality guideline values for U, Mg, Mn, and TAN would adequately protect ecosystems downstream of the mine. Environ Toxicol Chem 2021;40:2334-2346. © 2021 Commonwealth of Australia. Environmental Toxicology and Chemistry © 2021 SETAC.
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  • 文章类型: Journal Article
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  • 文章类型: Journal Article
    铜对细菌具有广泛的毒性。因此,细菌已经进化出专门的铜输出系统(cop操纵子),通常由DNA结合/铜响应调节因子(可以是阻遏物或激活剂)组成,一个铜伴侣,一个铜出口商。对于那些使用DNA结合铜阻遏物的细菌,很少有研究研究了该操纵子对抑制子结合所需的操纵子DNA序列的调节。在肺炎链球菌(肺炎球菌)中,CopY是警察操纵子的铜抑制子。以前,肺炎球菌CopY同源物的特征是结合10个碱基的共有序列T/GACANNTGTA,称为copbox。使用这个主题,我们试图确定cop操纵子之外的基因是否也受CopY阻遏因子的调节,我们发现肺炎链球菌CopY在体外不与这些候选基因上游的cop算子结合。我们发现,cop框序列是必要的,但不足以进行CopY绑定。这里,我们提出肺炎链球菌cop操纵子的更新操纵子序列为ATTGACAAATGTAGAT结合CopY,解离常数(Kd)为28nM。我们证明了一些CopY蛋白和CopY算子之间的强跨物种相互作用,表明了强大的进化保守性。结合我们的结合研究和生物信息学数据,我们提出了细菌CopR-CopY铜阻遏同源物的共识算子RNYKACANNYGTMRNY。重要性许多革兰氏阳性细菌通过上调由铜敏感阻遏物控制的铜输出系统对铜胁迫的反应,CopR-CopY.该蛋白质家族的先前操纵子序列已被鉴定为TACANNTGTA。这里,使用几种重组蛋白和各种DNA片段中的突变,我们将这10个碱基定义为必要的,但不足以进行绑定,将cop操纵子运算符细化为16个碱基的序列RNYKACANNTGTMRNY。由于据说与原始10个碱基结合的阻遏物数量众多,包括许多抗生素抗性抑制物,如BlaI和MecI,我们认为,这项研究强调需要重新检查过去的许多网站,并在未来使用更严格的方式来验证运营商。
    Copper is broadly toxic to bacteria. As such, bacteria have evolved specialized copper export systems (cop operons) often consisting of a DNA-binding/copper-responsive regulator (which can be a repressor or activator), a copper chaperone, and a copper exporter. For those bacteria using DNA-binding copper repressors, few studies have examined the regulation of this operon regarding the operator DNA sequence needed for repressor binding. In Streptococcus pneumoniae (the pneumococcus), CopY is the copper repressor for the cop operon. Previously, homologs of pneumococcal CopY have been characterized to bind a 10-base consensus sequence T/GACANNTGTA known as the cop box. Using this motif, we sought to determine whether genes outside the cop operon are also regulated by the CopY repressor, which was previously shown in Lactococcus lactis We found that S. pneumoniae CopY did not bind to cop operators upstream of these candidate genes in vitro During this process, we found that the cop box sequence is necessary but not sufficient for CopY binding. Here, we propose an updated operator sequence for the S. pneumoniae cop operon to be ATTGACAAATGTAGAT binding CopY with a dissociation constant (Kd ) of ∼28 nM. We demonstrate strong cross-species interaction between some CopY proteins and CopY operators, suggesting strong evolutionary conservation. Taken together with our binding studies and bioinformatics data, we propose the consensus operator RNYKACANNYGTMRNY for the bacterial CopR-CopY copper repressor homologs.IMPORTANCE Many Gram-positive bacteria respond to copper stress by upregulating a copper export system controlled by a copper-sensitive repressor, CopR-CopY. The previous operator sequence for this family of proteins had been identified as TACANNTGTA. Here, using several recombinant proteins and mutations in various DNA fragments, we define those 10 bases as necessary but not sufficient for binding and in doing so, refine the cop operon operator to the 16-base sequence RNYKACANNTGTMRNY. Due to the sheer number of repressors that have been said to bind to the original 10 bases, including many antibiotic resistance repressors such as BlaI and MecI, we feel that this study highlights the need to reexamine many of these sites of the past and use added stringency for verifying operators in the future.
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  • 文章类型: Journal Article
    在瑞典和芬兰的两个休闲码头中研究了溶解和生物可利用的铜(Cu)和锌(Zn)的季节性变化。来自两个码头的时间序列的特征是在春季船下水期间浓度上升,整个划船高峰期的浓度都在升高,并在秋季收回船只进行冬季储存时降低浓度。这种模式显示了Cu和Zn浓度与划船活动之间的明确联系,以防污涂料为主要来源。还发现从防污涂料中浸出会显着改变滨海水中溶解的Cu和Zn的形态,随着可能被认为是生物可利用的金属比例的增加。这种物种形成的变化,在溶解有机碳(DOC)没有任何变化的情况下发生,进一步增加了防污涂料带来的环境风险。在瑞典码头,溶解的铜和锌超过环境质量标准(EQS)和预测的无影响浓度(PNEC),这表明瑞典目前的防污涂料风险评估(RA)未能充分保护海洋环境。对RA性能的评估表明,潜在的原因是铜和锌的预测环境浓度(PEC)被2和5低估了。分别。对于这两种金属,发现使用不准确的释放速率进行PEC推导是造成低估的主要原因(Cu)或部分原因(Zn)。对于Zn,最大的误差来源似乎是在模型中使用了不适当的分配系数(KD)。为了确保防污涂料的使用不会对敏感的波罗的海产生不利影响,因此,建议修正Zn的KD值,并在RA程序中使用代表性的释放速率。
    The seasonal variations of dissolved and bioavailable copper (Cu) and zinc (Zn) were studied in two recreational marinas in Sweden and Finland. The time series from the two marinas were characterized by rising concentrations during the spring boat launching, elevated concentrations all through the peak boating season, and decreasing concentrations in autumn when boats were retrieved for winter storage. This pattern shows a clear link between Cu and Zn concentrations and boating activity, with antifouling paints as the principal source. The leaching from antifouling paints was also found to significantly alter the speciation of dissolved Cu and Zn in marina waters, with an increase of the proportion of metals that may be considered bioavailable. This change in speciation, which occurred without any change in dissolved organic carbon (DOC), further increases the environmental risk posed by antifouling paints. In the Swedish marina, dissolved Cu and Zn exceed both Environmental Quality Standards (EQS) and Predicted No Effect Concentrations (PNEC), indicating that the current Swedish risk assessment (RA) of antifouling paints is failing to adequately protect the marine environment. An evaluation of the RA performance showed the underlying cause to be an underestimation of the predicted environmental concentration (PEC) by factors of 2 and 5 for Cu and Zn, respectively. For both metals, the use of inaccurate release rates for the PEC derivation was found to be either mainly (Cu) or partly (Zn) responsible for the underestimation. For Zn, the largest source of error seems to be the use of an inappropriate partitioning coefficient (KD) in the model. To ensure that the use of antifouling coatings does not adversely impact the sensitive Baltic Sea, it is thus recommended that the KD value for Zn is revised and that representative release rates are used in the RA procedure.
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