AlphaFold

AlphaFold
  • 文章类型: Review
    目的:短暂性妊娠引起的库欣综合征是一种罕见的疾病,其特征是仅在怀孕期间表现出症状。通常在分娩或流产后自发解决。虽然已经确定GNAS与肾上腺肿瘤有关,其在妊娠性库欣综合征发病机制中的具体作用尚不明确。这项工作旨在研究GNAS突变与妊娠诱导的库欣综合征之间的关联。
    方法:从患者外周血和肿瘤组织中提取DNA进行全外显子组测序(WES)和Sanger测序。我们使用AlphaFold预测野生型和突变型GNAS的蛋白质结构,并进行功能预测。和免疫组织化学用于检测疾病相关蛋白的表达。对报道的短暂性妊娠诱发库欣综合征的病例进行了回顾和总结。
    结果:使用WES,我们在GNAS中鉴定了一个体细胞突变(NM_000516,c.C601T,p.R201C)使用计算方法预测会产生有害影响,例如AlphaFold。人绒毛膜促性腺激素(hCG)刺激试验有弱阳性结果,肾上腺腺瘤组织的免疫组织化学染色也显示黄体生成素/绒毛膜促性腺激素受体(LHCGR)和细胞色素P450家族11亚家族B成员1(CYP11B1)阳性。我们回顾了15例妊娠引起的短暂性库欣综合征。在这些案例中,在3例报告中,肾上腺的免疫组织化学染色显示LHCGR阳性表达,与我们的发现相似。
    结论:短暂性妊娠诱导的库欣综合征可能与体细胞GNAS突变和由于LHCGR异常激活引起的肾上腺病理改变有关。
    OBJECTIVE: Transient pregnancy-induced Cushing\'s syndrome is a rare condition characterized by the manifestation of symptoms solely during pregnancy, which typically resolve spontaneously following delivery or miscarriage. While it has been established that GNAS is associated with adrenal tumors, its specific role in the pathogenesis of pregnancy-induced Cushing\'s syndrome remains uncertain.This work aims to examine the association between GNAS mutation and pregnancy-induced Cushing\'s syndrome.
    METHODS: DNA was extracted from patients\' peripheral blood and tumor tissues for whole-exome sequencing (WES) and Sanger sequencing. We used AlphaFold to predict the protein structure of wild-type and mutant GNAS and to make functional predictions, and immunohistochemistry was used to detect disease-associated protein expression. A review and summary of reported cases of transient pregnancy-induced Cushing\'s syndrome induced by pregnancy was conducted.
    RESULTS: Using WES, we identified a somatic mutation in GNAS (NM_000516, c.C601T, p.R201C) that was predicted to have a deleterious effect using computational methods, such as AlphaFold. Human chorionic gonadotropin (hCG) stimulation tests had weakly positive results, and immunohistochemical staining of adrenal adenoma tissue also revealed positivity for luteinizing hormone/chorionic gonadotropin receptor (LHCGR) and cytochrome P450 family 11 subfamily B member 1 (CYP11B1). We reviewed 15 published cases of transient Cushing\'s syndrome induced by pregnancy. Among these cases, immunohistochemical staining of the adrenal gland showed positive LHCGR expression in 3 case reports, similar to our findings.
    CONCLUSIONS: Transient pregnancy-induced Cushing\'s syndrome may be associated with somatic GNAS mutations and altered adrenal pathology due to abnormal activation of LHCGR.
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  • 文章类型: Review
    背景:Townes-Brocks综合征是一种罕见的由SALL1突变引起的常染色体显性遗传综合征。Townes-Brocks综合征的临床特征是高度异源性的。新的SALL1突变的鉴定以及SALL1突变与临床特征之间关系的研究可以促进Townes-Brocks综合征的诊断。
    方法:我们收集了两名患者及其家庭成员的临床数据和血液样本,用于全外显子组测序和Sanger测序。使用Alphafold实现了SALL1变异蛋白质结构的预测分析。剖析临床材料和基因测序成果。剖析临床材料和基因测序成果。检索Townes-Brocks综合征的相关文献,结合2例进行基因型-肾表型分析。
    结果:根据临床特征和基因测序结果,这两名患者被诊断为汤斯-布洛克斯综合征。确定了两个新的SALL1突变(c.878-887del和c.1240G>T),两者都是致病性突变。总结了SALL1突变引起的Townes-Brocks综合征患者基因型与肾脏表型的相关性。
    结论:这项研究发现了两个新的突变,并为Townes-Brocks综合征的基因型和肾脏表型的相关性提供了新的见解。
    Townes-Brocks syndrome is a rare autosomal dominant genetic syndrome caused by mutations in SALL1. The clinical features of Townes-Brocks syndrome are highly heterogonous. Identification of new SALL1 mutations and study of the relation between SALL1 mutations and clinical features can facilitate diagnosis of Townes-Brocks syndrome.
    We collected clinical data and blood samples of the two patients and their family members for whole-exome sequencing and Sanger sequencing. Prediction analysis of the SALL1variation protein structure was achieved using Alphafold. The clinical materials and gene sequencing results were analyzed. The clinical materials and gene sequencing results were analyzed. The related literature of Townes-Brocks syndrome were searched and the genotype-renal phenotype analysis was performed combined with this two cases.
    Based on the clinical features and gene sequencing results, the two patients were diagnosed as Townes-Brocks syndrome. Two novel SALL1 mutations (c.878-887del and c.1240G > T) were identified, both of which were pathogenic mutations. The correlation between genotypes and renal phenotypes in Townes-Brocks syndrome patients caused by SALL1 mutation were summarized.
    This study identified two novel mutations and provided new insights into the correlation of genotypes and renal phenotypes of Townes-Brocks syndrome.
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  • 文章类型: Journal Article
    Kininogens are multidomain glycoproteins found in the blood of most vertebrates. High molecular weight kininogen demonstrate both carrier and co-factor activity as part of the intrinsic pathway of coagulation, leading to thrombin generation. Kininogens are the source of the vasoactive nonapeptide bradykinin. To date, attempts to crystallize kininogen have failed, and very little is known about the shape of kininogen at an atomic level. New advancements in the field of cryo-electron microscopy (cryoEM) have enabled researchers to crack the structure of proteins that has been refractory to traditional crystallography techniques. High molecular weight kininogen is a good candidate for structural investigation by cryoEM. The goal of this review is to summarize the findings of kininogen structural studies.
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