关键词: BMD Becker muscular dystrophy Bioinformatics DMD Direct sequencing Duchenne muscular dystrophy ESE Exonic Splicing Enhancer HSF Human Splicing Finder MLPA Missense mutation Multiplex Ligation-dependent Probe Amplification Panther PolyPhen Polymorphism Phenotyping Protein ANalysis THrough Evolutionary Relationships SIFT SNAP Sorting Intolerant From Tolerant screening for non-acceptable polymorphisms

Mesh : Algorithms Alleles Amino Acid Sequence Computer Simulation Consensus Sequence DNA Mutational Analysis Developing Countries Dystrophin / chemistry genetics Exons Humans Male Models, Genetic Molecular Sequence Data Muscular Dystrophy, Duchenne / diagnosis genetics Mutation, Missense Position-Specific Scoring Matrices Prognosis Sequence Alignment

来  源:   DOI:10.1016/j.gene.2013.11.022

Abstract:
DMD gene which is composed of 79 exons is the largest known gene located on X chromosome (Xp21). Point mutations in the dystrophin gene are responsible for 30-35% of cases with DMD/BMD. Mutation analysis of all the exons of the DMD gene is costly in developing countries, therefore, a few of the exons are selected to be analyzed routinely in clinical laboratories. In this study, direct sequencing was used for detection of point mutations in 10 exons of dystrophin gene in patients affected with DMD without detectable large rearrangements. Freely available programs were used to predict the damaging effects of the mutations. Point mutations were successfully detected in three patients. Three novel mutations, two missense mutations located on nonconservative domains and a single nucleotide deletion, were detected. Missense mutations were predicted to change splicing efficiency. Detection of point mutations by DNA analysis followed by prediction of the pathogenecity by using bioinformatic tool might be an asset to provide proper diagnosis or genetic counseling to patients and their family.
摘要:
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