viral load kinetics

  • 文章类型: Journal Article
    猴痘病毒(MPXV)正在全球蔓延,近一半的感染者是人类免疫缺陷病毒(HIV)阳性。因此,我们迫切需要深入了解HIV感染对MPXV感染结局的影响.本研究旨在探讨其临床特点,病毒动力学,以及在有和没有HIV共同感染的男男性行为者(MSM)中对MPXV感染的抗体反应。
    本研究招募了通过PCR诊断的MPXV感染患者,并根据他们是否与HIV共感染分为MPXV和MPXV+HIV组。在住院期间和随访访谈期间收集临床数据和样本。症状和体征,实验室检查,病毒在各种体液或拭子中脱落,追踪并比较两组间的抗体动力学.
    截至2023年6月至2023年9月,在广州共招募了41名MPXV患者。MPXV组和MPXV+HIV组包括20和21个MSM,分别。除瘙痒和焦痂外,两组患者的临床特征相似,MPXV+HIV组均显著低于仅MPXV组.在收集的355个临床样本中,在100%结痂中检测到MPXVDNA,97.4%的皮肤拭子,和92.3%的病灶渗出液拭子,口咽拭子阳性率为87.5%,59%来自唾液,51.3%来自肛门拭子,50%来自粪便,30.6%来自尿液样本,占精液的37.5%,28.2%来自血清。动力学分析显示,大多数患者在症状发作后20天无法检测到病毒DNA。MPXV组比MPXV+HIV组早3-5天,所有患者均检测到MPXV的IgM和IgG抗体。
    这项基于广州MSM大规模爆发的队列分析表明,临床症状没有明显差异,病毒DNA数据,但抗体反应是3-5天后,在感染HIV的水痘患者。
    UNASSIGNED: Monkeypox virus (MPXV) is spreading globally and nearly half of the infected people were human immunodeficiency virus (HIV) positive. Therefore, an in-depth understanding of the effects of HIV infection on the outcomes of MPXV infection is urgently needed. This study aimed to explore the clinical features, viral dynamics, and antibody response to MPXV infections in men who had sex with men (MSM) with and without HIV co-infection.
    UNASSIGNED: MPXV-infected patients diagnosed by PCR were recruited in this study and were divided into MPXV and MPXV + HIV groups based on whether they were co-infected with HIV. Clinical data and samples were collected during of the hospital stay and follow up interviews. The symptoms and signs, laboratory examinations, viral shedding in various body fluids or swabs, antibody dynamics were tracked and compared between the two groups.
    UNASSIGNED: A total of 41 MPXV patients were recruited through June 2023 to September 2023 in Guangzhou. The MPXV group and MPXV + HIV group comprised 20 and 21 MSM, respectively. Patients in the two groups exhibited similar clinical characteristics except for pruritus and eschar, both were significantly fewer in MPXV + HIV group than in MPXV only group. Among the 355 clinical samples collected, MPXV DNA was detected in 100% of scabs, 97.4% of skin swabs, and 92.3% of exudate swabs from lesions, while the positive rate was 87.5% from oropharyngeal swabs, 59% from saliva, 51.3% from anal swabs, 50% from feces, 30.6% from urine samples, 37.5% of semen, and 28.2% from sera. Dynamics analysis revealed that viral DNA was undetectable in most patients 20 days after symptom onset. IgM and IgG antibodies to MPXV were detected in all patients with 3-5 days earlier in the MPXV group than in the MPXV + HIV group.
    UNASSIGNED: This cohort analysis based on a large outbreak among MSM in Guangzhou indicated no obvious differences in clinical symptoms, viral DNA data, but antibody responses were 3-5 days later in mpox patients with HIV infection.
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  • 文章类型: Journal Article
    尽管临床管理取得了进展,巨细胞病毒(CMV)感染仍然是严重的并发症,也是肾移植后发病率和死亡率的重要原因。这里,在加拿大大型纵向基因组移植联盟(GCTC)肾移植队列中,我们探讨了病毒载量动力学作为风险预测因子的重要性,以及减少移植失败的潜在治疗指南.
    我们检查了CMV感染率与临床特征之间的关系,CMV病毒载量动力学,不列颠哥伦比亚省移植计划中2510例顺序肾移植受者的移植物和患者结局。移植在2008年1月1日至2018年12月31日之间进行,根据标准协议进行管理,并随访至2019年12月31日,代表超过340万天的护理。
    对2464例患者进行了纵向CMV检测,其中434人(17.6%)在移植后中位120天(范围:9-3906天)出现CMV病毒血症首次发作。在这些病人中,93例(21.4%)仅有CMV病毒血症,341例(78.6%)有CMV病毒血症伴临床并发症,其中21人(4.8%)因此住院。在12年的随访中,共有279例(11.3%)患者死亡,177例(7.2%)患者失去了移植物。CMV感染患者的移植物丢失(p=0.0041)和死亡(p=0.0056)的风险明显高于没有感染的患者。峰值病毒载量范围为2.9至7.0(中位数:3.5)log10IU/mL,病毒血症的持续时间从2到100(15)天,和曲线下的病毒载量面积从9.4到579.8(59.7)log10IU/mL×天。所有三个参数都密切相关,并且在临床疾病更严重或移植物丢失的患者中显着增加(p=0.001)。第一次CMV病毒血症发作持续时间超过15天或峰值病毒载量≥4.0log10IU/mL提供了临床风险的简单预测因子,移植失败的风险是3倍。
    病毒载量动力学与CMV严重程度和肾移植后移植物丢失密切相关,并提供了一个简单的风险指数,这在指导试验和治疗以预防移植失败方面可能是有价值的。
    Despite advances in clinical management, cytomegalovirus (CMV) infection remains a serious complication and an important cause of morbidity and mortality following kidney transplantation. Here, we explore the importance of viral load kinetics as predictors of risk and potential guides to therapy to reduce transplant failure in a large longitudinal Genome Canada Transplant Consortium (GCTC) kidney transplant cohort.
    We examined the relationship between CMV infection rates and clinical characteristics, CMV viral load kinetics, and graft and patient outcomes in 2510 sequential kidney transplant recipients in the British Columbia Transplant Program. Transplants were performed between January 1, 2008, and December 31, 2018, were managed according to a standard protocol, and were followed until December 31, 2019, representing over 3.4 million days of care.
    Longitudinal CMV testing was performed in 2464 patients, of whom 434 (17.6%) developed a first episode of CMV viremia at a median of 120 (range: 9-3906) days post-transplant. Of these patients, 93 (21.4%) had CMV viremia only and 341 (78.6%) had CMV viremia with clinical complications, of whom 21 (4.8%) had resulting hospitalization. A total of 279 (11.3%) patients died and 177 (7.2%) patients lost their graft during the 12 years of follow-up. Patients with CMV infection were at significantly greater risk of graft loss (p=0.0041) and death (p=0.0056) than those without. Peak viral load ranged from 2.9 to 7.0 (median: 3.5) log10 IU/mL, the duration of viremia from 2 to 100 (15) days, and the viral load area under the curve from 9.4 to 579.8 (59.7) log10 IU/mL × days. All three parameters were closely inter-related and were significantly increased in patients with more severe clinical disease or with graft loss (p=0.001). Duration of the first CMV viremic episode greater than 15 days or a peak viral load ≥4.0 log10 IU/mL offered simple predictors of clinical risk with a 3-fold risk of transplant failure.
    Viral load kinetics are closely related to CMV severity and to graft loss following kidney transplantation and provide a simple index of risk which may be valuable in guiding trials and treatment to prevent transplant failure.
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  • 文章类型: Journal Article
    背景:移植物存活主要由移植受者的排斥和感染并发症决定。扭矩特诺病毒(TTV),一种非致病性和普遍存在的单链DNA病毒,已被提议作为移植患者免疫状态的生物标志物。这项研究旨在确定Home-BrewTTVPCR和R-GENE®PCR之间的相关性;肾移植受者的TTV病毒载量动力学以及与移植物排斥的关联。
    方法:对107名成人肾移植受者进行前瞻性队列研究。通过Home-BrewPCR和商业PCR(R-GENE®PCR)在肾移植之前和之后收集的746个血浆样品中测定TTV病毒载量。分析了TTV病毒载量与移植物排斥的关联。
    结果:两种PCR方法的一致性为93.2%,皮尔逊相关系数为r:0.902(95CI:0.8881-0.9149,p<0.0001)。TTV病毒载量动力学显示初始逐渐增加,在3个月时达到峰值。这一最高值随后略有下降,在6个月时达到显著高于初始基线的平台期(p<0.0001)。移植后(181-270)天之间,TTV中位病毒载量在移植排斥反应患者中显著降低,3.59Log10拷贝/mL(通过Home-BrewPCR)和3.10Log10拷贝/mL(通过R-GENE®PCR)与无移植物排斥反应的患者(6.14和5.96Log10拷贝/mL,分别)。
    结论:移植后出现肾排斥反应的患者中,TTV病毒载量显著降低。鉴于移植后TTV病毒载量的动态行为,风险分层预测排斥反应的截止值可能与移植后时期相关.
    Graft survival is mainly determined by rejections and infectious complications in transplant recipients. Torque Teno Virus (TTV), a nonpathogenic and ubiquitous single-stranded DNA virus, has been proposed as a biomarker of the immune status in transplant patients. This study aimed to determine the correlation between a Home-Brew TTV PCR and R-GENE®PCR; the TTV viral load kinetics in renal transplant recipients and the association with graft rejection.
    Prospective cohort study on 107 adult renal transplant recipients. TTV viral load was determined in 746 plasma samples collected before and after renal transplantation by a Home-Brew PCR and a commercial PCR (R-GENE®PCR). Associations of TTV viral load with graft rejections were analyzed.
    Agreement of both PCR assays was 93.2% and Pearson correlation coefficient was r: 0.902 (95%CI: 0.8881-0.9149, p < 0.0001). TTV viral load kinetics showed an initial gradual increase reaching a peak at 3 months. This highest value was followed by a slight decrease, reaching a plateau significantly higher than the initial baseline at 6 months (p < 0.0001). Between (181-270) days post-transplantation, TTV median viral load in patients with graft rejection was significantly lower, 3.59 Log10 copies/mL (by Home-Brew PCR) and 3.10 Log10 copies/mL (by R-GENE®PCR) compared to patients without graft rejection (6.14 and 5.96 Log10 copies/mL, respectively).
    Significantly lower TTV viral load was observed in patients with renal rejection occurring at a median of 243 days post-transplantation. Given the dynamic behavior of TTV viral load post-transplantation, cut-off values for risk stratification to predict rejection might be determined in relation to the post-transplant period.
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  • 文章类型: Journal Article
    围产期感染艾滋病毒的儿童,在cART启动后,随着时间的推移,形成较低的原储层负荷,如通过HIVDNA液滴数字聚合酶链反应(ddPCR)测量的,对HIV抗体的影响没有很好的表征。我们测量了37名6个月大的围产期HIV感染儿童的前病毒HIVDNA和血浆RNA病毒载量(VL),这些儿童开始了稳定的cART。在6-11岁的时候,HIV前病毒DNA,HIVVL(RNA),通过WesternBlot(WB)评估HIV抗体。CART在13名儿童的6个月之前开始,在24名儿童的6个月之后开始。在上学的年龄,HIVDNA水平没有因cART的时间而不同,WB阴性/不确定儿童的HIVDNA水平较低(p=0.0256)。自cART启动以来检测不到HIVRNAVL>50%的儿童的中位DNAVL低于检测不到VL<50%的儿童(p=0.07)。围产期HIV感染儿童的长期病毒抑制与HIV抗体减少和HIV储库减少有关。
    The extent to which perinatally HIV-infected children, following cART initiation, develop a low proviral reservoir burden over time, as measured by HIV DNA droplet-digital polymerase chain reaction (ddPCR) and the effect on HIV antibody is not well characterized. We measured proviral HIV DNA and plasma RNA virus load (VL) in 37 perinatally HIV-infected children at 6 months of age who initiated stable cART. At 6-11 years of age, HIV proviral DNA, HIV VL (RNA), and HIV antibody by Western Blot (WB) were assessed. CART was initiated before 6 months of age in 13 children and after 6 months in 24. At school age, the HIV DNA levels did not differ by the timing of cART, and the HIV DNA levels were lower in children with negative/indeterminate WB (p = 0.0256). Children with undetectable HIV RNA VL > 50% of the time since cART initiation had lower median DNA VL than children with undetectable VL < 50% of the time (p = 0.07). Long-term viral suppression in perinatally HIV-infected children is associated with a decrease in HIV antibodies and reduced HIV reservoirs.
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  • 文章类型: Journal Article
    截至2022年7月,正在进行的猴痘病毒疫情包括全球先前非流行国家的至少7553例确诊病例。据报道,临床表现变化很大,有时缺乏经典描述的全身症状,大多数患者只有少量的皮肤病变。本研究的目的是将临床数据与病灶拭子的纵向qPCR结果进行比较,一个特征明确的患者队列中的口咽拭子和血液。
    16名男性患者(5名住院,11名门诊患者)被纳入研究队列,并在整个疾病过程中在各种材料中进行了猴痘病毒-DNA的连续测试。实验室分析包括定量PCR,下一代测序,免疫荧光试验和细胞培养中的病毒分离。
    所有患者均为男性,年龄在20到60岁之间,并且自我认定为与男性发生性关系的男性。两个人已知感染了艾滋病毒,与血液中可检测到的病变和病毒DNA数量增加相吻合。在初始和串行测试中,病变拭子在,或高于106cp/ml,仅在第三周下降。口咽拭子具有较低的病毒载量,在某些情况下反复返回阴性。病毒培养仅在病变拭子中成功,而在口咽拭子或血浆中未成功。
    提供的数据强调了病变拭子用于猴痘病毒检测的可靠性,甚至在疾病的后期。单单口咽拭子和血液样本就有假阴性结果的风险,但在症状前/无症状病例或病毒载量监测中可能有价值,分别。
    The ongoing monkeypox virus outbreak includes at least 7553 confirmed cases in previously non-endemic countries worldwide as of July 2022. Clinical presentation has been reported as highly variable, sometimes lacking classically described systemic symptoms, and only small numbers of cutaneous lesions in most patients. The aim of this study was to compare clinical data with longitudinal qPCR results from lesion swabs, oropharyngeal swabs and blood in a well characterized patient cohort.
    16 male patients (5 hospitalized, 11 outpatients) were included in the study cohort and serial testing for monkeypox virus-DNA carried out in various materials throughout the course of disease. Laboratory analysis included quantitative PCR, next-generation sequencing, immunofluorescence tests and virus isolation in cell culture.
    All patients were male, between age 20 and 60, and self-identified as men having sex with men. Two had a known HIV infection, coinciding with an increased number of lesions and viral DNA detectable in blood. In initial- and serial testing, lesion swabs yielded viral DNA-loads at, or above 106 cp/ml and only declined during the third week. Oropharyngeal swabs featured lower viral loads and returned repeatedly negative in some cases. Viral culture was successful only from lesion swabs but not from oropharyngeal swabs or plasma.
    The data presented underscore the reliability of lesion swabs for monkeypox virus-detection, even in later stages of the disease. Oropharyngeal swabs and blood samples alone carry the risk of false negative results, but may hold value in pre-/asymptomatic cases or viral load monitoring, respectively.
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  • 文章类型: Journal Article
    在2019年冠状病毒大流行期间,少数指数病例与大多数次要病例相关,表明超级传播者可能推动大流行。我们在具有极高病毒载量的个体中鉴定了一种表型,他们可以充当超级传播者。
    数据来自2020年3月18日至8月15日接受严重急性呼吸道综合症冠状病毒2(SARS-CoV-2)测试的个体。使用列联表和分位数回归比较了结果,以测试大流行波与病毒载量组之间中位数的相等性。
    在测试的11564个样品中,1319人(11.4%)为SARS-CoV-2阳性。在SARS-CoV2大流行的第二波中,每周中位病毒载量增加。这个人口更有可能是女性,门诊病人,和症状,并有极高或高的病毒载量。在多个逆转录聚合酶链反应阳性检测结果的患者中,无症状/轻度和轻度/中度疾病严重程度的个体之间的病毒脱落持续时间相当.
    我们发现了一小群SARS-CoV-2病毒载量极高、病情轻微的个体。我们认为,这些个体的特征可能与超级传播者现象相一致,并且需要对这些个体的社会动态有更大的认识,以了解SARS-CoV-2的传播。
    During the coronavirus disease 2019 pandemic, a minority of index cases are associated with a majority of secondary cases suggesting that superspreaders could drive the pandemic. We identified a phenotype in individuals with extremely high viral load who could act as superspreaders.
    Data were analyzed from individuals tested for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) from 18 March through 15 August 2020. Outcomes were compared using contingency table and quantile regression to test the equality of medians between the pandemic waves and by viral load groups.
    Of the 11 564 samples tested, 1319 (11.4%) were positive for SARS-CoV-2. An increase in weekly median viral load occurred in the second wave of the SARS-CoV2 pandemic. This population was more likely to be women, outpatients, and symptomatic and to have an extremely high or high viral load. In patients with multiple reverse-transcription polymerase chain reaction-positive test results, the durations of viral shedding were comparable between individuals with asymptomatic/mild and mild/moderate illness severity.
    We detected a small group of individuals with extremely high SARS-CoV-2 viral loads and mild illness. We believe that these individuals\' characteristics could be consistent with the superspreader phenomenon and that greater awareness of the social dynamics of these individuals is needed to understand the spread of SARS-CoV-2.
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  • 文章类型: Case Reports
    截至2020年2月,2019年12月开始在中国爆发的严重急性呼吸道综合症冠状病毒2(SARS-CoV-2)已在世界许多国家蔓延。随着确诊病例的增多,有关流行病学调查和临床表现的信息已经积累。然而,在确诊病例中缺乏病毒载量动力学数据。这里,我们介绍了韩国前两名确诊的轻度至中度疾病患者的病毒载量动力学,其中显示了不同的病毒载量动力学。该报告表明,SARS-CoV-2的病毒载量动力学可能不同于先前报道的其他冠状病毒感染,例如SARS-CoV。
    As of February 2020, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) outbreak started in China in December 2019 has been spreading in many countries in the world. With the numbers of confirmed cases are increasing, information on the epidemiologic investigation and clinical manifestation have been accumulated. However, data on viral load kinetics in confirmed cases are lacking. Here, we present the viral load kinetics of the first two confirmed patients with mild to moderate illnesses in Korea in whom distinct viral load kinetics are shown. This report suggests that viral load kinetics of SARS-CoV-2 may be different from that of previously reported other coronavirus infections such as SARS-CoV.
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