topological metrics

  • 文章类型: Journal Article
    相变通常使用阶数参数进行量化,如晶格距离和径向分布函数,它可以识别晶体材料或具有较大结构差异的高对比度相的细微变化。然而,识别具有高复杂性的阶段,在相变之前的结构波动期间,多尺度组织和复杂模式,这对于理解阶段之间的系统路径至关重要,对于那些传统的分析来说是具有挑战性的。这里,结果表明,对于两个模型系统-热致液晶和溶致水/表面活性剂混合物-图论(GT)描述符可以成功地识别复杂的相,结合了分子和纳米级的组织水平,这些水平很难用传统方法表征。此外,GT描述符还揭示了不同阶段之间的路径。具体来说,中心性参数和基于节点的分形维数量化了过渡之前的系统行为,捕获波动诱导的聚集体破碎及其长期合作相互作用。GT参数化可以推广到广泛的化学系统,并有助于复杂纳米结构的生长机制。
    Phase transitions are typically quantified using order parameters, such as crystal lattice distances and radial distribution functions, which can identify subtle changes in crystalline materials or high-contrast phases with large structural differences. However, the identification of phases with high complexity, multiscale organization and of complex patterns during the structural fluctuations preceding phase transitions, which are essential for understanding the system pathways between phases, is challenging for those traditional analyses. Here, it is shown that for two model systems- thermotropic liquid crystals and a lyotropic water/surfactant mixtures-graph theoretical (GT) descriptors can successfully identify complex phases combining molecular and nanoscale levels of organization that are hard to characterize with traditional methodologies. Furthermore, the GT descriptors also reveal the pathways between the different phases. Specifically, centrality parameters and node-based fractal dimension quantify the system behavior preceding the transitions, capturing fluctuation-induced breakup of aggregates and their long-range cooperative interactions. GT parameterization can be generalized for a wide range of chemical systems and be instrumental for the growth mechanisms of complex nanostructures.
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  • 文章类型: Journal Article
    背景:重度抑郁症(MDD)的神经生物学发病机制仍存在很大争议。先前的文献中,样本量有限,利用组级结构协方差网络(SCN)通常会产生有关脑网络拓扑的混合发现。
    方法:我们分析了来自高能多部位样本的T1图像,包括1173名MDD患者和1019名健康对照(HC)。我们使用基于区域间效应大小差异的新方法,使用区域灰质体积构建单个SCN。我们使用拓扑度量进一步研究了MDD相关的结构连通性改变。
    结果:与HC相比,MDD患者表现出朝向随机化的转变,其特征在于整合增加.对不同阶段患者的进一步亚组分析显示,在复发性MDD患者中也观察到这种随机化模式。而首发药物初治的患者表现出减少的隔离。与HCs相比,在MDD患者中还发现了在情绪调节和执行控制中起关键作用的几个大脑区域的节点特性改变。颞下回的异常不受任何特定部位的影响。此外,抗抑郁剂可提高前腹内侧前额叶皮质的淋巴结效率.
    结论:不同阶段的MDD患者在他们的大脑网络中表现出不同的随机化模式,在疾病进展期间增加整合。这些发现为MDD患者发生的结构性脑网络破坏提供了有价值的见解,可能有助于指导未来的治疗干预。
    BACKGROUND: The neurobiological pathogenesis of major depression disorder (MDD) remains largely controversial. Previous literatures with limited sample size utilizing group-level structural covariance networks (SCN) commonly generated mixed findings regarding the topology of brain networks.
    METHODS: We analyzed T1 images from a high-powered multisite sample including 1173 patients with MDD and 1019 healthy controls (HCs). We used regional gray matter volume to construct individual SCN by utilizing a novel approach based on the interregional effect size difference. We further investigated MDD-related structural connectivity alterations using topological metrics.
    RESULTS: Compared to HCs, the MDD patients showed a shift toward randomization characterized by increased integration. Further subgroup analysis of patients in different stages revealed this randomization pattern was also observed in patients with recurrent MDD, while the first-episode drug naïve patients exhibited decreased segregation. Altered nodal properties in several brain regions which have a key role in both emotion regulation and executive control were also found in MDD patients compared with HCs. The abnormalities in inferior temporal gyrus were not influenced by any specific site. Moreover, antidepressants increased nodal efficiency in the anterior ventromedial prefrontal cortex.
    CONCLUSIONS: The MDD patients at different stages exhibit distinct patterns of randomization in their brain networks, with increased integration during illness progression. These findings provide valuable insights into the disruption in structural brain networks that occurs in patients with MDD and might be useful to guide future therapeutic interventions.
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  • 文章类型: Journal Article
    目的:癫痫是弥漫性低度胶质瘤(DLGG)的常见症状。脑白质(WM)改变在神经胶质瘤相关性癫痫(GRE)患者中的具体作用尚不清楚。本研究旨在调查WM束的重组以及与GRE相关的结构网络的变化。
    方法:收集了70例左额叶DLGG患者(GRE=33,非GRE=37)和41例健康对照(HC)的扩散加权图像。使用TractSeg的示踪测定法应用于节段束,并量化沿每个束的分数各向异性(FA)。使用约束球形反卷积和概率束图法构建结构网络。比较三组的FA和网络特性。
    结果:与HC相比,GRE和non-GRE均显示对侧额枕骨下束FA降低,上纵束II和弓形束,额叶-顶叶和边缘网络对侧节点的节点效率增加,而颞叶背侧和前端中额回(rMFG)节点的度中心性和介数中心性降低。此外,当比较GRE和非GRE时,GRE中对侧皮质脊髓束(CST)的FA增加,中央小叶旁小叶(PCL)的介数中心性降低(Bonferroni校正后所有p<0.05)。
    结论:这项研究表明,左额DLGG患者表现出复杂的WM重组,改变的区域主要集中在语言上,额叶-顶叶和边缘网络。此外,保留的对侧CST完整性和降低的PCL服务器节点间值可能是GRE术前癫痫发作的潜在神经影像学标志物.
    Epilepsy is a common symptom in diffuse lower-grade glioma (DLGG). The specific role of white matter (WM) alteration in patients with glioma-related epilepsy (GRE) is largely unknown. This study aims to investigate the reorganization of WM tracts and changes in structural networks related to GRE.
    Diffusion-weighted images were collected from 70 patients with left frontal DLGG (GRE = 33, non-GRE = 37) and 41 healthy controls (HC). Tractometry with TractSeg was applied to segment tracts and quantify fractional anisotropy (FA) along each tract. Structural network was constructed using constrained spherical deconvolution and probabilistic tractography. FA and network properties were compared among three groups.
    Compared with HC, both GRE and non-GRE showed decreased FA in contralateral inferior fronto-occipital fasciculus, superior longitudinal fasciculus II and arcuate fasciculus, increased nodal efficiency in contralateral nodes of frontal-parietal and limbic networks, whereas decreased degree centrality and betweenness centrality in nodes of dorsal temporal lobe and rostral middle frontal gyrus (rMFG). Additionally, when compared GRE with non-GRE, increased FA in contralateral corticospinal tract (CST) and lower betweenness centrality in paracentral lobule (PCL) in GRE (all p < 0.05 after Bonferroni correction).
    This study indicates that patients with left frontal DLGG exhibit complex WM reorganization, and the altered regions mainly concentrated in the language, frontal-parietal and limbic networks. Moreover, the preserved integrity in contralateral CST and server decreased nodal betweenness in PCL may be potential neuroimaging markers underlying the occurrence of presurgical seizures of GRE.
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  • 文章类型: Journal Article
    白质(WM)网络的拓扑特征之间的关系已被证明与神经发育有关,情报,和各种疾病;然而,很少有研究探讨WM网络拓扑特征与脑代谢之间的关系。在最近的一项研究中,我们使用新开发的T2-松弛下自旋标记(TRUST)磁共振成像技术和图论方法,研究了健康志愿者中WM网络拓扑与脑实质代谢指标之间的关系。本研究招募了96名健康成年人(25.5±1.8岁)作为志愿者。脑氧气代谢率(CMRO2),氧提取分数,和WM网络的全局拓扑度量(全局效率[Eglob],本地效率,和小世俗)进行了评估。估计了逐步多元线性回归模型。输入CMRO2作为因变量。拓扑和人口参数(年龄,性别,FIQ,SBP,灰质体积,和WM体积)作为自变量输入到模型中。最终执行的模型由Eglob的预测因子组成,FIQ,和年龄(调整后的R2值为0.489[L-AAL]和0.424[H-1024])。我们的研究最初揭示了健康年轻人的Eglob与脑氧代谢之间的关系。
    The relationship between the topological characteristics of the white matter (WM) network have been shown to be related to neural development, intelligence, and various diseases; however, few studies have been conducted to explore the relationship between topological characteristics of the WM network and cerebral metabolism. In a recent study we investigated the relationship between WM network topological and metabolic metrics of the cerebral parenchyma in healthy volunteers using the newly developed T2-relaxation-under-spin-tagging (TRUST) magnetic resonance imaging technique and graph theory approaches. Ninety-six healthy adults (25.5 ± 1.8 years of age) were recruited as volunteers in the current study. The cerebral metabolic rate of oxygen (CMRO2), oxygen extraction fraction, and the global topological metrics of the WM network (global efficiency [Eglob], local efficiency, and small-worldliness) were assessed. A stepwise multiple linear regression model was estimated. CMRO2 was entered as the dependent variable. The topological and demographic parameters (age, gender, FIQ, SBP, gray matter volume, and WM volume) were entered as independent variables in the model. The final performing models were comprised of predictors of Eglob, FIQ, and age (adjusted R2 values were 0.489 [L-AAL] and 0.424 [H-1024]). Our study initially revealed a relationship between Eglob and cerebral oxygen metabolism in healthy young adults.
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