terpene synthase

萜烯合酶
  • 文章类型: Journal Article
    萜类化合物是结构多样的天然产物,已广泛用于制药,食物,和化妆品行业。研究表明,真菌产生多种萜类化合物,然而,真菌萜合酶仍未彻底探索。在这项研究中,tps1基因,萜烯合成途径的关键组成部分,通过基因组挖掘从木霉HB20111中分离。通过构建tps1基因缺失和过表达工程菌株,并在转录水平上评估tps1基因的表达差异,研究了该基因在萜烯合成途径中的功能。HS-SPME-GC-MS分析显示野生型中萜烯代谢物的显着差异,tps1-删除(Δtps1),和tps1过表达(Otps1)菌株;例如,大多数倍半萜挥发性有机化合物(VOCs)在Δtps1菌株中显著减少或不存在,而Nerolidol,β-acorenol,和愈创烯特别由Otps1菌株产生。然而,与野生型相比,Δtps1和Otps1菌株都产生了新的萜烯代谢产物,这表明tps1基因在萜烯合成中起重要作用,但不是T.atrovirideHB20111涉及的唯一基因。通过生物学信息和进化树分析,tps1基因编码的TPS1蛋白可以作为倍半萜环化酶发挥作用。此外,真菌抑制试验和小麦生长促进试验结果表明,tps1基因的缺失或过表达对真菌抑制活性的影响最小,促进植物生长,和发展,以及应激反应。这意味着T.atrovirideHB20111的这些活性可能来自多种代谢物的组合,而不是仅仅依赖于一种特定的代谢物。本研究为今后研究萜类化合物的合成机制提供了理论指导,为真菌中萜类化合物代谢途径的相关研究奠定了基础。
    Terpenoids are structurally diverse natural products that have been widely used in the pharmaceutical, food, and cosmetic industries. Research has shown that fungi produce a variety of terpenoids, yet fungal terpene synthases remain not thoroughly explored. In this study, the tps1 gene, a crucial component of the terpene synthetic pathway, was isolated from Trichoderma atroviride HB20111 through genome mining. The function of this gene in the terpene synthetic pathway was investigated by constructing tps1-gene-deletion- and overexpression-engineered strains and evaluating the expression differences in the tps1 gene at the transcript level. HS-SPME-GC-MS analysis revealed significant variations in terpene metabolites among wild-type, tps1-deleted (Δtps1), and tps1-overexpressed (Otps1) strains; for instance, most sesquiterpene volatile organic compounds (VOCs) were notably reduced or absent in the Δtps1 strain, while nerolidol, β-acorenol, and guaiene were particularly produced by the Otps1 strain. However, both the Δtps1 and Otps1 strains produced new terpene metabolites compared to the wild-type, which indicated that the tps1 gene played an important role in terpene synthesis but was not the only gene involved in T. atroviride HB20111. The TPS1 protein encoded by the tps1 gene could function as a sesquiterpene cyclase through biological information and evolutionary tree analysis. Additionally, fungal inhibition assay and wheat growth promotion assay results suggested that the deletion or overexpression of the tps1 gene had a minimal impact on fungal inhibitory activity, plant growth promotion, and development, as well as stress response. This implies that these activities of T. atroviride HB20111 might result from a combination of multiple metabolites rather than being solely dependent on one specific metabolite. This study offers theoretical guidance for future investigations into the mechanism of terpenoid synthesis and serves as a foundation for related studies on terpenoid metabolic pathways in fungi.
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  • 文章类型: Journal Article
    萜类化合物在所有生命王国中无处不在,是最多样化的化合物之一,结构和功能。尽管来自共同的前体,异戊烯二磷酸和二甲基烯丙基二磷酸,它们特殊的多样性部分是由萜烯合酶的底物和产物混杂驱动的,这些酶产生了各种各样的萜烯骨架。根据序列同源性和功能,植物萜烯合酶可以细分为不同的亚家族。然而,在许多情况下,酶的结构结构对产物特异性比单独的一级序列更重要,和远缘相关的萜合酶通常可以介导类似的反应。因此,这篇简短综述的重点是在了解萜类合成酶功能和多样性方面的一些最新进展。
    Terpenoids are ubiquitous to all kingdoms of life and are one of the most diverse groups of compounds, both structurally and functionally. Despite being derived from common precursors, isopentenyl diphosphate and dimethylallyl diphosphate, their exceptional diversity is partly driven by the substrate and product promiscuity of terpene synthases that produce a wide array of terpene skeletons. Plant terpene synthases can be subdivided into different subfamilies based on sequence homology and function. However, in many cases, structural architecture of the enzyme is more essential to product specificity than primary sequence alone, and distantly related terpene synthases can often mediate similar reactions. As such, the focus of this brief review is on some of the recent progress in understanding terpene synthase function and diversity.
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  • 文章类型: Journal Article
    唇形科植物的几个成员产生大量的精油[EO],这些精油在食品中得到了广泛的应用,化妆品,个人卫生,和替代医药行业。在这些植物中存在增强EO代谢的兴趣。
    薰衣草产生一种富含单萜的有价值的环氧乙烷,类异戊二烯或萜类化合物的C10类。近年来,研究人员已经做出了巨大的努力来研究萜烯代谢并通过植物生物技术增强薰衣草EO。本文综述了近年来有关薰衣草单萜生物合成基因的克隆和旨在提高植物和微生物中薰衣草单萜产量的代谢工程尝试的研究进展。
    代谢工程导致了几种植物的EO质量和产量的提高,包括薰衣草.此外,已经在微生物中产生了几种生物活性EO成分。
    UNASSIGNED: Several members of the Lamiaceae family of plants produce large amounts of essential oil [EO] that find extensive applications in the food, cosmetics, personal hygiene, and alternative medicine industries. There is interest in enhancing EO metabolism in these plants.
    UNASSIGNED: Lavender produces a valuable EO that is highly enriched in monoterpenes, the C10 class of the isoprenoids or terpenoids. In recent years, substantial effort has been made by researchers to study terpene metabolism and enhance lavender EO through plant biotechnology. This paper reviews recent advances related to the cloning of lavender monoterpene biosynthetic genes and metabolic engineering attempts aimed at improving the production of lavender monoterpenes in plants and microbes.
    UNASSIGNED: Metabolic engineering has led to the improvement of EO quality and yield in several plants, including lavender. Furthermore, several biologically active EO constituents have been produced in microorganisms.
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  • 文章类型: Journal Article
    钒依赖性卤代过氧化物酶(VHPOs)是一个独特的酶家族,利用钒酸盐,含水卤离子,和过氧化氢以产生可并入富电子有机基质中的亲电子卤素物质。这种卤素物质可以与萜烯底物反应,并以使人联想到II类萜合酶的方式引发卤诱导的环化。虽然并非所有VHPO都以这种身份行事,来自藻类和放线菌物种的几个值得注意的例子已经被表征为催化萜烯和类萜烯底物上的区域选择性和对映选择性反应,通过单一酶的作用产生复杂的卤化环萜烯。在这篇文章中,我们描述的表达,净化,和NapH4的化学分析,NapH4是一种难以表达的表征的VHPO,可催化氯盐诱导的其类硫萜类底物的环化。
    Vanadium-dependent haloperoxidases (VHPOs) are a unique family of enzymes that utilize vanadate, an aqueous halide ion, and hydrogen peroxide to produce an electrophilic halogen species that can be incorporated into electron rich organic substrates. This halogen species can react with terpene substrates and trigger halonium-induced cyclization in a manner reminiscent of class II terpene synthases. While not all VHPOs act in this capacity, several notable examples from algal and actinobacterial species have been characterized to catalyze regio- and enantioselective reactions on terpene and meroterpenoid substrates, resulting in complex halogenated cyclic terpenes through the action of single enzyme. In this article, we describe the expression, purification, and chemical assays of NapH4, a difficult to express characterized VHPO that catalyzes the chloronium-induced cyclization of its meroterpenoid substrate.
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  • 文章类型: Journal Article
    膜结合蛋白的表达和纯化仍然是一个挑战,限制了酶学的努力。在自然界中发现的许多蛋白质的生化功能方面造成了巨大的知识空白。因此,由于纯化体外表征活性酶所需的实验障碍,细菌UbiA萜烯合酶(TS)的研究受到限制。以前的工作采用微粒体或粗膜部分来测试酶活性;然而,这些方法可能是劳动密集型的,需要使用超速离心机,或者可能不适用于所有膜结合TS。我们在这里详细介绍了通过在大肠杆菌中采用前体过量生产系统来实现膜相关UbiATS的体内表达和生化表征的替代策略。
    Expression and purification of membrane-bound proteins remains a challenge and limits enzymology efforts, contributing to a substantial knowledge gap in the biochemical functions of many proteins found in nature. Accordingly, the study of bacterial UbiA terpene synthases (TSs) has been limited due to the experimental hurdles required to purify active enzymes for characterization in vitro. Previous work employed the use of microsomes or crude membrane fractions to test enzyme activity; however, these methods can be labor intensive, require access to an ultracentrifuge, or may not be suitable for all membrane-bound TSs. We detail here an alternative strategy for the in vivo expression and biochemical characterization of the membrane associated UbiA TSs by employing a precursor overproduction system in Escherichia coli.
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  • 文章类型: Journal Article
    萜烯是最大的天然产品家族之一,具有可再生平台化学品和药物的强大应用。低活动,萜烯生物合成机器显示的选择性和稳定性可能构成在遵守绿色化学12条原则的过程中实现萜类化合物的便捷生物合成的障碍。因此,萜烯合酶的工程是工业生物技术应用的先决条件,但是由于它们的复杂催化作用而受阻,这些催化作用依赖于容易发生分叉机制的活性碳阳离子中间体。萜烯合酶的合理重新设计可能是繁琐的,需要高分辨率的结构信息,这并不总是可用的。此外,已证明难以将萜烯合酶的序列空间与特定产物谱联系起来。在这里,作者展示了祖先序列重建(ASR)如何在不需要结构的情况下,可以有利地用作重新设计萜烯合酶的蛋白质工程工具,没有过度的筛查。介绍了ASR的详细工作流程以及相关限制,重点是将这种方法应用于萜烯合酶。从I类和II类酶的选定实例中,作者主张,祖先萜烯环化酶是有价值的资产,可以揭示萜烯合酶的催化和促进生物合成。
    Terpenes constitute one of the largest family of natural products with potent applications as renewable platform chemicals and medicines. The low activity, selectivity and stability displayed by terpene biosynthetic machineries can constitute an obstacle towards achieving expedient biosynthesis of terpenoids in processes that adhere to the 12 principles of green chemistry. Accordingly, engineering of terpene synthase enzymes is a prerequisite for industrial biotechnology applications, but obstructed by their complex catalysis that depend on reactive carbocationic intermediates that are prone to undergo bifurcation mechanisms. Rational redesign of terpene synthases can be tedious and requires high-resolution structural information, which is not always available. Furthermore, it has proven difficult to link sequence space of terpene synthase enzymes to specific product profiles. Herein, the author shows how ancestral sequence reconstruction (ASR) can favorably be used as a protein engineering tool in the redesign of terpene synthases without the need of a structure, and without excessive screening. A detailed workflow of ASR is presented along with associated limitations, with a focus on applying this methodology on terpene synthases. From selected examples of both class I and II enzymes, the author advocates that ancestral terpene cyclases constitute valuable assets to shed light on terpene-synthase catalysis and in enabling accelerated biosynthesis.
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  • 文章类型: Journal Article
    使用萜烯合酶的混杂活性进行非天然萜烯的化学酶合成,可以扩大具有潜在新生物活性的萜类化合物的化学空间。在这份报告中,我们描述了制备新型蚜虫引诱剂的方案,(S)-14,15-二甲基雌二醇D,通过利用加拿大一枝黄花的(S)-germacreneD合酶的混杂性,并使用工程化的生物催化途径将戊烯醇转化为萜类化合物。该方法使用五种酶的组合,分两步进行萜类化学信息素的制备:(1)五或六碳前体的双磷酸化(prenol,异戊烯醇和甲基-异戊烯醇)由恶性疟原虫胆碱激酶和甘氏异戊烯基磷酸酯激酶催化形成DMADP,IDP和甲基IDP,(2)嗜热脂肪土芽孢杆菌催化的链延长和环化(2E,6E)-法尼基二磷酸合酶和加拿大S。(S)-germacreneD合酶产生(S)-germacreneD和(S)-14,15-二甲基germacreneD。使用此方法,新的非天然萜类化合物很容易获得,该方法可用于生产具有潜在新应用的不同萜类类似物和萜类化合物衍生物。
    Chemoenzymatic synthesis of non-natural terpenes using the promiscuous activity of terpene synthases allows for the expansion of the chemical space of terpenoids with potentially new bioactivities. In this report, we describe protocols for the preparation of a novel aphid attractant, (S)-14,15-dimethylgermacrene D, by exploiting the promiscuity of (S)-germacrene D synthase from Solidago canadensis and using an engineered biocatalytic route to convert prenols to terpenoids. The method uses a combination of five enzymes to carry out the preparation of terpenoid semiochemicals in two steps: (1) diphosphorylation of five or six carbon precursors (prenol, isoprenol and methyl-isoprenol) catalyzed by Plasmodium falciparum choline kinase and Methanocaldococcus jannaschii isopentenyl phosphate kinase to form DMADP, IDP and methyl-IDP, and (2) chain elongation and cyclization catalyzed by Geobacillus stearothermophilus (2E,6E)-farnesyl diphosphate synthase and S. canadensis (S)-germacrene D synthase to produce (S)-germacrene D and (S)-14,15-dimethylgermacrene D. Using this method, new non-natural terpenoids are readily accessible and the approach can be adopted to produce different terpene analogs and terpenoid derivatives with potential novel applications.
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  • 文章类型: Journal Article
    萜烯合酶催化的步骤是工程萜类生物生产中公认的重要瓶颈。因此,大量的努力已经致力于增加由萜烯合酶催化的代谢通量,采用基因过表达和蛋白质工程等策略。值得注意的是,通过应用翻译融合,许多研究已经证明了显著的滴度改善,通常通过将萜烯合酶与催化该途径的前一步的异戊烯二磷酸合酶融合。平移融合方法的主要吸引力在于其简单性和与其他代谢工程工具的正交性。然而,目前对通量增强的潜在机制的理解有限,由于翻译融合的不可预测且通常是蛋白质特异性的作用。在这一章中,我们讨论了工程翻译融合萜烯合酶时的实际考虑因素,从我们的经验和现有文献中汲取见解。我们还根据我们以前在发芽酵母(酿酒酵母)中的工作提供详细的实验工作流程和方案。我们的目的是鼓励进一步研究萜烯合酶的翻译融合,预计这不仅会对活动产生机械论的见解,行为,和调节萜烯合酶,还有其他酶。
    The step catalyzed by terpene synthases is a well-recognized and significant bottleneck in engineered terpenoid bioproduction. Consequently, substantial efforts have been devoted towards increasing metabolic flux catalyzed by terpene synthases, employing strategies such as gene overexpression and protein engineering. Notably, numerous studies have demonstrated remarkable titer improvements by applying translational fusion, typically by fusing the terpene synthase with a prenyl diphosphate synthase that catalyzes the preceding step in the pathway. The main appeal of the translational fusion approach lies in its simplicity and orthogonality to other metabolic engineering tools. However, there is currently limited understanding of the underlying mechanism of flux enhancement, owing to the unpredictable and often protein-specific effects of translational fusion. In this chapter, we discuss practical considerations when engineering translationally fused terpene synthases, drawing insights from our experience and existing literature. We also provide detailed experimental workflows and protocols based on our previous work in budding yeast (Saccharomyces cerevisiae). Our intention is to encourage further research into the translational fusion of terpene synthases, anticipating that this will contribute mechanistic insights not only into the activity, behavior, and regulation of terpene synthases, but also of other enzymes.
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  • 文章类型: Journal Article
    结论:CaTPS2和CaTPS3在姜黄的花中显著表达,并表现出双功能酶活性,CaTPS2产生了芳樟醇和橙花醇作为产品,CaTPS3催化β-月桂烯和β-法尼烯的形成。这项研究提出了姜黄花萜烯合酶(TPS)基因的发现和功能特征。以其独特的香味而闻名的品种。解决理解该物种花香遗传基础的差距,我们通过综合转录组测序鉴定了8个TPS基因.其中,CaTPS2和CaTPS3在花组织中显着表达,并显示出与“阴影”中检测到的主要挥发性化合物相对应的双功能酶活性。功能分析,包括体外试验,辅以严格的对照和替代的鉴定方法,阐明了这些TPS基因在萜类生物合成中的作用。通过在大肠杆菌中异源表达进行体外研究,然后使用亲和层析纯化重组蛋白,酶测定是用GPP/FPP作为底物进行的,将挥发性产物插入GC-MS中进行分析。部分纯化的CaTPS2重组蛋白催化Gp和FPP产生芳樟醇和橙花醇,分别,部分纯化的CaTPS3重组蛋白,以GPP和FPP为底物生成β-月桂烯和β-法呢烯,分别。实时定量PCR进一步验证了这些基因的表达模式,与萜类化合物在不同植物组织中的积累有关。我们的发现阐明了支撑C.alismatifolia花香的分子机制,并为观赏植物花香的未来遗传增强奠定了基础。这项研究,因此,有助于更广泛地理解植物香料中的萜类生物合成,为生物技术在园艺植物育种中的应用铺平了道路。
    CONCLUSIONS: CaTPS2 and CaTPS3 were significantly expressed in flowers of Curcuma alismatifolia \'Shadow\' and demonstrated bifunctional enzyme activity, CaTPS2 generated linalool and nerolidol as products, and CaTPS3 catalyzed β-myrcene and β-farnesene formation. This study presents the discovery and functional characterization of floral terpene synthase (TPS) genes in Curcuma alismatifolia \'Shadow\', a cultivar renowned for its unique fragrance. Addressing the gap in understanding the genetic basis of floral scent in this species, we identified eight TPS genes through comprehensive transcriptome sequencing. Among these, CaTPS2 and CaTPS3 were significantly expressed in floral tissues and demonstrated bifunctional enzyme activity corresponding to the major volatile compounds detected in \'Shadow\'. Functional analyses, including in vitro assays complemented with rigorous controls and alternative identification methods, elucidated the roles of these TPS genes in terpenoid biosynthesis. In vitro studies were conducted via heterologous expression in E. coli, followed by purification of the recombinant protein using affinity chromatography, enzyme assays were performed with GPP/FPP as the substrate, and volatile products were inserted into the GC-MS for analysis. Partially purified recombinant protein of CaTPS2 catalyzed GPP and FPP to produce linalool and nerolidol, respectively, while partially purified recombinant protein of CaTPS3 generated β-myrcene and β-farnesene with GPP and FPP as substrates, respectively. Real-time quantitative PCR further validated the expression patterns of these genes, correlating with terpenoid accumulation in different plant tissues. Our findings illuminate the molecular mechanisms underpinning floral fragrance in C. alismatifolia and provide a foundation for future genetic enhancements of floral scent in ornamental plants. This study, therefore, contributes to the broader understanding of terpenoid biosynthesis in plant fragrances, paving the way for biotechnological applications in horticulture plant breeding.
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