sugar metabolism

糖代谢
  • 文章类型: Journal Article
    糖苷水解酶(GHs,也称为糖苷酶)催化多糖中糖苷键的水解。已经从各种生物体中鉴定出许多GH基因,并分为188个家族。将GH1缩写为GH188。GH32家族中的酶水解果聚糖,它们存在于大约15%的开花植物中,并且广泛分布在微生物中。GH32基因在动物中很少发现,因为果聚糖不是动物中使用的典型碳水化合物来源。这里,我们报告了在84种动物中发现的242个GH32基因,从线虫到螃蟹。对这些基因的遗传分析表明,各种动物的GH32基因来源于不同的细菌,独立的水平基因转移事件。动物中的GH32基因基于活性中心的高度保守的催化叶片和三联体而表现出功能性,尽管预测的蛋白质之间的序列相似性总体较低(35-60%)。动物对GH32基因的获取可能对受体生物体的糖代谢具有深远的影响。我们的结果与以前的报道一起表明,获得性GH32酶可能不仅可以作为消化酶,但也可以作为操纵寄主植物的效应子,作为某些动物的非消化组织中的代谢酶。我们的研究结果为未来研究GH32基因在动物中水平转移的意义奠定了基础。这里报道的信息丰富了我们对水平基因转移的认识,GH32函数,和动植物相互作用,这可能会导致实际应用。例如,通过抑制GH32酶的靶向工程开发作物可以帮助植物抵抗动物害虫。
    Glycoside hydrolases (GHs, also called glycosidases) catalyze the hydrolysis of glycosidic bonds in polysaccharides. Numerous GH genes have been identified from various organisms and are classified into 188 families, abbreviated GH1 to GH188. Enzymes in the GH32 family hydrolyze fructans, which are present in approximately 15% of flowering plants and are widespread across microorganisms. GH32 genes are rarely found in animals, as fructans are not a typical carbohydrate source utilized in animals. Here, we report the discovery of 242 GH32 genes identified in 84 animal species, ranging from nematodes to crabs. Genetic analyses of these genes indicated that the GH32 genes in various animals were derived from different bacteria via multiple, independent horizontal gene transfer events. The GH32 genes in animals appear functional based on the highly conserved catalytic blades and triads in the active center despite the overall low (35-60%) sequence similarities among the predicted proteins. The acquisition of GH32 genes by animals may have a profound impact on sugar metabolism for the recipient organisms. Our results together with previous reports suggest that the acquired GH32 enzymes may not only serve as digestive enzymes, but also may serve as effectors for manipulating host plants, and as metabolic enzymes in the non-digestive tissues of certain animals. Our results provide a foundation for future studies on the significance of horizontally transferred GH32 genes in animals. The information reported here enriches our knowledge of horizontal gene transfer, GH32 functions, and animal-plant interactions, which may result in practical applications. For example, developing crops via targeted engineering that inhibits GH32 enzymes could aid in the plant\'s resistance to animal pests.
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  • 文章类型: Journal Article
    热应激是严重损害作物的普遍因素,特别是随着全球变暖和极端天气事件频率的增加。烟草对温度波动特别敏感,在高温下经历产量和质量降低。然而,烟草耐热性的潜在分子机制仍然知之甚少。本研究全面分析了生化,转录组,与对照条件相比,烟草品种K326的根和芽对热胁迫的代谢组学响应。热应激显著增加了抗氧化酶(CAT,POD,和SOD)和渗透介质(可溶性糖,蔗糖,和脯氨酸)。此外,转录组分析确定了根中的13,176个差异表达基因(DEGs)(6,129个上调和7,047个下调)和茎中的12,283个DEGs(6,621个上调和5,662个下调)。根具有24个富集的KEGG途径,包括苯丙素代谢,虽然枝条有32条重要的途径,如半乳糖代谢和MAPK信号传导。代谢组学数据确定了根中的647种代谢物和芽中的932种代谢物,碳水化合物和氨基酸是主要类别。根具有116种差异丰富的代谢物(DAM)(107种上调,9种下调),并且枝条含有256个DAM(251个上调和5个下调)。联合转录组和代谢组分析表明,半乳糖代谢和淀粉和蔗糖代谢在两个组织中共同富集。相比之下,根系富含氨基糖和核苷酸糖代谢,和芽中的嘌呤代谢。芽中的嘌呤代谢途径可以通过影响ABA的合成和信号转导来调节MYB转录因子的表达,从而控制HSPs的积累,棉子糖,蔗糖,和海藻糖以增强耐热性。此外,NtMYB78,MYB转录因子,增强烟草对热应激的耐受性。这项研究为研究和实施烟草幼苗根和芽中的耐热基因和代谢途径提供了基础框架。
    Heat stress is a prevalent factor that significantly damages crops, especially with the ongoing global warming and increasing frequency of extreme weather events. Tobacco is particularly sensitive to temperature fluctuations, experiencing reduced yield and quality under high temperatures. However, the underlying molecular mechanisms of heat resistance in tobacco remain poorly understood. This study comprehensively analyzed biochemical, transcriptomic, and metabolomic responses to heat stress on the root and shoot of the tobacco cultivar K326 compared to control conditions. Heat stress significantly increased the activities of antioxidant enzymes (CAT, POD, and SOD) and levels of osmotic mediators (soluble sugars, sucrose, and proline) in the shoot. Furthermore, transcriptome analysis identified 13,176 differentially expressed genes (DEGs) in the root (6,129 up-regulated and 7,047 down-regulated) and 12,283 DEGs (6,621 up-regulated and 5,662 down-regulated) in the shoot. The root had 24 enriched KEGG pathways, including phenylpropanoid metabolism, while the shoot had 32 significant pathways, such as galactose metabolism and MAPK signaling. The metabolomic data identified 647 metabolites in the root and 932 in the shoot, with carbohydrates and amino acids being the main categories. The root had 116 differentially abundant metabolites (DAMs) (107 up-regulated and 9 down-regulated), and the shoot contained 256 DAMs (251 up-regulated and 5 down-regulated). Joint transcriptome and metabolome analysis showed that galactose metabolism and starch and sucrose metabolism were co-enriched in both tissues. In contrast, amino sugar and nucleotide sugar metabolism was enriched in the root, and purine metabolism in the shoot. The purine metabolic pathway in the shoot can modulate the expression of MYB transcription factors by influencing ABA synthesis and signaling, thereby controlling the accumulation of HSPs, raffinose, sucrose, and trehalose to enhance heat tolerance. Furthermore, NtMYB78, an MYB transcription factor, enhances tolerance for heat stress in tobacco. This research offers a foundational framework for investigating and implementing heat-resistant genes and metabolic pathways in the root and shoot of tobacco seedlings.
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  • 文章类型: Journal Article
    青椒果实低温贮藏过程中的冷害(CI)导致品质显著下降。本研究利用生理,转录组,和代谢组学分析,以识别胰蛋白酶减轻青椒在4°C储存8天的机制,其次是3天的保质期。结果表明,胰蛋白酶处理显着降低了辣椒中的电解质泄漏和CI指数,有效延长其保质期和保持采后质量。储存4天后,比较组学分析在胰蛋白酶处理的辣椒和对照辣椒之间确定了2514个差异表达基因(DEG)和397个差异丰富的代谢物(DAM)。胰蛋白酶处理诱导糖代谢的变化,调节HK的表达,SUS,INV,和GLGC,这影响了代谢物如CDP-葡萄糖和α-D-p-葡萄糖的丰度。胰蛋白酶还增强类胡萝卜素代谢,改变了红色素苷的丰度,1'-羟基-γ-胡萝卜素葡糖苷,和法尼基1-PP,影响PDS的表达,CRTH,CRTB,LUT5值得注意的是,胰蛋白酶处理激活了丝裂原活化蛋白激酶(MAPK)途径,该途径在非生物胁迫的信号转导中起着不可或缺的作用。FLS2、ELF18、PTO的差异表达,PR1,PTI5,WPKY,MEKK1和MPK6基因在MAPK通路中观察到,这与冷藏期间青椒的CI缓解相关。总之,胰蛋白酶是在冷藏期间减少青椒中CI的有效治疗方法。本研究为其对青椒果实的生理和分子影响提供了有价值的见解。
    Chilling injury (CI) in green pepper fruits during low-temperature storage causes a significant decline in quality. The present study utilized physiological, transcriptomic, and metabolomic analyses to idneitfy the mechanisms by which trypsin mitigates CI in green peppers stored at 4 °C for 8 days, followed by 3 days of shelf life. Results indicated that the trypsin treatment significantly reduced electrolyte leakage and the CI index in peppers, effectively extending their shelf life and preserving postharvest quality. After 4 days of storage, comparative -omic analyses identified 2514 differentially expressed genes (DEGs) and 397 differentially abundant metabolites (DAMs) between trypsin-treated and control peppers. The trypsin treatment induced changes in sugar metabolism, modulating the expression of HK, SUS, INV, and GLGC, which affected the abundance of metabolites such as CDP-glucose and α-D-p-glucose. Trypsin also enhanced carotenoid metabolism, altering the abundance of rhodopinal glucoside, 1\'-hydroxyl-γ-carotene glucoside, and farnesyl 1-PP, and influencing the expression of PDS, CRTH, CRTB, and LUT5. Notably, the trypsin treatment activated the mitogen-activated protein kinase (MAPK) pathway that plays an integral role in the signal transduction of abiotic stress. Differential expression of FLS2, ELF18, PTO, PR1, PTI5, WPKY, MEKK1, and MPK6 genes in the MAPK pathway was observed, which was correlated with CI mitigation in green peppers during cold storage. In conclusion, trypsin is an effective treatment for reducing CI in green peppers during cold storage. The present study provides valuable insights into its physiological and molecular impact on green pepper fruit.
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  • 文章类型: Journal Article
    在收获后阶段,水果无情地受到外在压力,加速能量消耗并缩短储存寿命。本研究试图阐明荔枝通过能量代谢和糖代谢对2,4-二硝基苯酚(DNP)处理引起的能量状态改变的反应策略。观察到DNP处理降低了果实的能量状态,储存24小时后,果皮中的膜损伤加剧,并引发快速褐变。此外,与能量代谢密切相关的基因表达(LcAtpB,LcAOX1、LcUCP1、LcAAC1和,LcSnRK2)在储存的最初24小时内达到峰值,伴随着呼吸频率的升高,有效抑制了荔枝果皮褐变指数的上升。这项研究还认为,为了应对能量水平和膜损伤的降低,荔枝可以增加果糖的浓度,葡萄糖,肌醇,半乳糖,和山梨糖,从而维护水果的典型代谢功能。总的来说,这些发现表明,荔枝可以调节能量和糖代谢,以应对能量缺乏条件下的果实衰老。这项研究极大地促进了人们对荔枝果实对收获后外部应激源表现出的生理反应的理解。
    In the post-harvest phase, fruit is inexorably subjected to extrinsic stressors that expedite energy expenditure and truncate the storage lifespan. The present study endeavors to elucidate the response strategies of litchi to the alterations of energy state caused by 2,4-Dinitrophenol (DNP) treatment through energy metabolism and sugar metabolism. It was observed that the DNP treatment reduced the energy state of the fruit, exacerbated membrane damage and triggered rapid browning in the pericarp after 24 h of storage. Furthermore, the expression of genes germane to energy metabolism (LcAtpB, LcAOX1, LcUCP1, LcAAC1, and, LcSnRK2) reached their peak within the initial 24 h of storage, accompanied by an elevation in the respiratory rate, which effectively suppressed the rise in browning index of litchi pericarp. The study also posits that, to cope with the decrease of energy levels and membrane damage, litchi may augment the concentrations of fructose, glucose, inositol, galactose, and sorbose, thus safeguarding the canonical metabolic functions of the fruit. Collectively, these findings suggest that litchi can modulate energy and sugar metabolism to cope with fruit senescence under conditions of energy deficiency. This study significantly advances the understanding of the physiological responses exhibited by litchi fruit to post-harvest external stressors.
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  • 文章类型: Journal Article
    背景:Festucakryloviana是青海湖地区重要的本地草种,出苗率低是限制耕地成功建立的主要因素。该地区干旱和低降雨的气候特征导致地表土壤水分含量降低。尽管人们认识到水的可用性对植物生长的影响,水分在幼苗发育中的具体作用仍未完全阐明。本研究的目的是研究不同水分条件下的F.kryloviana种子的发芽率和幼苗生长速度。并整合这些条件下幼苗的生理和转录组学分析,以揭示水分影响幼苗发育的机制。
    结果:F.kryloviana幼苗的出苗率表现出初始增加,然后随着水分含量的增加而降低。出现率最高,达到75%,在20%的土壤湿度条件下观察到。到实验的第八天,在最佳出现率(满水,FW)分别为21.82%和10.87%,分别,比背景调查期间与土壤水分含量紧密匹配的那些(压力水,软件)。在不同的水分条件下,幼苗的发育差异归因于种子内的糖代谢和脱落酸(ABA)的积累。在FW条件下,增强糖代谢,为幼苗发育产生更多的能量,由较高的α-淀粉酶活性促进,蔗糖合成酶,和海藻糖-6-磷酸合酶与SW条件相比。这反映在转录组水平上,α-淀粉酶(AMY2)基因和海藻糖-6-磷酸合酶(TPS6)的表达上调,而与ABA信号和转导相关的基因下调。此外,在FW条件下,叶绿体类囊体光系统相关基因的表达,如光系统II(PSII)和光系统I(PSI),被上调,提高幼苗的光捕获能力和光合效率,从而提高他们的自养能力。此外,FW处理增强非酶抗氧化系统的表达,促进种子内的新陈代谢。相比之下,SW处理增加酶促抗氧化系统的活性,包括过氧化物酶(POD),超氧化物歧化酶(SOD),和过氧化氢酶(CAT),以应对水的压力。
    结论:我们的实验系统地评估了水分条件对F.kryloviana幼苗生长发育的影响。生理和转录组数据共同表明,充足的水(20%)供应通过降低ABA水平和增加种子内α-淀粉酶活性来促进幼苗生长和发育。从而促进糖代谢,促进幼苗生长,这反过来又提高了出苗率。在未来的栽培实践中考虑水的管理可能是增强在草地生态系统中成功建立F.kryloviana的关键策略。
    BACKGROUND: Festuca kryloviana is a significant native grass species in the Qinghai Lake region, and its low emergence rate is a primary factor limiting the successful establishment of cultivated grasslands. The region\'s arid and low-rainfall climate characteristics result in reduced soil moisture content at the surface. Despite the recognized impact of water availability on plant growth, the specific role of moisture in seedling development remains not fully elucidated. This study aims to investigate the germination rate and seedling growth velocity of F. kryloviana seeds under varying moisture conditions, and to integrate physiological and transcriptomic analyses of seedlings under these conditions to reveal the mechanisms by which water influences seedling development.
    RESULTS: The emergence rate of F. kryloviana seedlings exhibited an initial increase followed by a decrease with increasing moisture content. The highest emergence rate, reaching 75%, was observed under 20% soil moisture conditions. By the eighth day of the experiment, the lengths of the plumules and radicles under the optimal emergence rate (full water, FW) were 21.82% and 10.87% longer, respectively, than those under closely matching the soil moisture content during the background survey (stress water, SW). The differential development of seedlings under varying moisture regimes is attributed to sugar metabolism within the seeds and the accumulation of abscisic acid (ABA). At FW conditions, enhanced sugar metabolism, which generates more energy for seedling development, is facilitated by higher activities of α-amylase, sucrose synthase, and trehalose-6-phosphate synthase compared to SW conditions. This is reflected at the transcriptomic level with upregulated expression of the α-amylase (AMY2) gene and trehalose-6-phosphate synthase (TPS6), while genes associated with ABA signaling and transduction are downregulated. Additionally, under FW conditions, the expression of genes related to the chloroplast thylakoid photosystems, such as photosystem II (PSII) and photosystem I (PSI), is upregulated, enhancing the seedlings\' light-capturing ability and photosynthetic efficiency, thereby improving their autotrophic capacity. Furthermore, FW treatment enhances the expression of the non-enzymatic antioxidant system, promoting metabolism within the seeds. In contrast, SW treatment increases the activity of the enzymatic antioxidant system, including peroxidase (POD), superoxide dismutase (SOD), and catalase (CAT), to cope with water stress.
    CONCLUSIONS: Our experiment systematically evaluated the impact of moisture conditions on the growth and development of F. kryloviana seedlings. Physiological and transcriptomic data collectively indicate that adequate water (20%) supply enhances seedling growth and development by reducing ABA levels and increasing α-amylase activity within seeds, thereby boosting sugar metabolism and promoting the growth of seedling, which in turn leads to an improved emergence rate. Considering water management in future cultivation practices may be a crucial strategy for enhancing the successful establishment of F. kryloviana in grassland ecosystems.
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  • 文章类型: Journal Article
    耐万古霉素肠球菌(VRE)由于其治疗选择有限,对公众健康构成严重威胁。因此,越来越需要确定新的靶标来开发新药。这里,我们研究了通用PTS组件的作用,PtsI和PtsH,在屎肠球菌中确定它们在碳代谢中的作用,生物膜的形成,应激反应,以及在胃肠道竞争的能力。ptsHI的清洁缺失导致导入和代谢单糖的能力显着降低,衰减的增长率,减少生物膜形成,并在体外和体内降低了竞争力。然而,与野生型相比,在应激存活率方面没有观察到显著差异。这些结果表明,靶向通用或特定的PTS可以通过降低屎肠球菌的适应性来提供新的治疗策略。
    Vancomycin-resistant enterococci (VRE) pose a serious threat to public health because of their limited treatment options. Therefore, there is an increasing need to identify novel targets to develop new drugs. Here, we examined the roles of the universal PTS components, PtsI and PtsH, in Enterococcus faecium to determine their roles in carbon metabolism, biofilm formation, stress response, and the ability to compete in the gastrointestinal tract. Clean deletion of ptsHI resulted in a significant reduction in the ability to import and metabolize simple sugars, attenuated growth rate, reduced biofilm formation, and decreased competitive fitness both in vitro and in vivo. However, no significant difference in stress survival was observed when compared with the wild type. These results suggest that targeting universal or specific PTS may provide a novel treatment strategy by reducing the fitness of E. faecium.
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  • 文章类型: Journal Article
    干旱是显著影响植物生长和发育的环境胁迫源。在植物生长发育的背景下理解干旱胁迫和水分利用的复杂性对可持续农业具有重要意义。这项研究的目的是评估外源施用的植物激素对生菜(LactucasativaL.)糖含量谱,抗氧化酶活性和生产力的影响。莴苣植物在正常和干旱条件下在光周期为14/10小时(白天/夜晚)的生长室中生长。当第二片叶子完全膨胀时,分别和组合施用激肽和脱落酸。结果表明,干旱条件下预处理植株的糖积累和生产力显著高于对照。这项工作提供的观点表明,与生长相关和与胁迫相关的植物激素显着影响植物糖代谢,代谢概况,和生产力,从而能够控制产量和质量。
    Drought is an environmental stressor that significantly impacts plant growth and development. Comprehending the complexity of drought stress and water utilization in the context of plant growth and development holds significant importance for sustainable agriculture. The aim of this study was to evaluate the effect of exogenously applied phytohormones on lettuce (Lactuca sativa L.) sugar content profiles and antioxidant enzyme activity and productivity. Lettuce plants were grown under normal and drought conditions in a growth chamber with a photoperiod of 14/10 h (day/night). Kinetin and abscisic acid were applied separately and in combinations when the second leaf was fully expanded. The results showed that sugar accumulation and productivity of the pretreated plants under drought were significantly higher than the controls. The perspective offered by this work showed that growth-related and stress-related phytohormones significantly influenced plant sugar metabolism, metabolic profiles, and productivity, thus enabling the control of yield and quality.
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  • 文章类型: Journal Article
    苯丙氨酸(Phe)通过激活类苯丙素代谢加速果实伤口愈合。然而,在伤口愈合过程中,Phe是否会影响水果中的蔗糖和呼吸代谢,目前尚不清楚。在这项研究中,我们发现收获前Phe喷雾通过激活酸性转化酶(AI)促进蔗糖降解并增加葡萄糖和果糖水平,中性转化酶(NI),收获的甜瓜上的蔗糖合酶(SS)和蔗糖磷酸合酶(SPS)。喷雾还激活己糖激酶(HK),磷酸果糖激酶(PFK),丙酮酸激酶(PK),苹果酸脱氢酶(MDH),琥珀酸脱氢酶(SDH)和葡萄糖-6-磷酸脱氢酶(G6PDH)。此外,喷雾提高了能量并降低了水果中的功率水平。一起来看,收获前Phe喷雾可以提供碳骨架,能量和通过激活蔗糖代谢减少伤口愈合的力量,Embden-Meyerhof-Parnas(EMP)通路,甜瓜伤口愈合过程中的三羧酸(TCA)循环和磷酸戊糖(PPP)途径,有望作为加速水果伤口愈合的新策略。
    Phenylalanine (Phe) accelerates fruit wound healing by activating phenylpropanoid metabolism. However, whether Phe affects sucrose and respiratory metabolism in fruit during wound healing remains unknown. In this research, we found that preharvest Phe spray promoted sucrose degradation and increased glucose and fructose levels by activating acid invertase (AI), neutral invertase (NI), sucrose synthase (SS) and sucrose phosphate synthase (SPS) on harvested muskmelons. The spray also activated hexokinase (HK), phosphofructokinase (PFK), pyruvate kinase (PK), malate dehydrogenase (MDH), succinate dehydrogenase (SDH) and glucose-6-phosphate dehydrogenase (G6PDH). In addition, the spray improved energy and reducing power levels in the fruit. Taken together, preharvest Phe spray can provide carbon skeleton, energy and reducing power for wound healing by activating the sucrose metabolism, Embden-Meyerhof-Parnas (EMP) pathway, tricarboxylic acid (TCA) cycle and pentose phosphate (PPP) pathway in muskmelon wounds during healing, which is expected to be developed as a new strategy to accelerate fruit wound healing.
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  • 文章类型: Journal Article
    收获时水果中发现的大部分碳都是由韧皮部进口的。进口碳提供了积累糖所需的材料,有机酸,二级化合物,除了细胞壁合成所需的材料。果实发育过程中糖的积累不仅影响甜度,而且影响控制果实组成的各种参数(果实“质量”)。葡萄果肉细胞中有机酸和糖的积累是浆果发育和成熟的关键过程。本文综述了葡萄浆果发育研究的最新进展,解剖结构,糖和酸的代谢,糖运输机,和监管因素。
    Most of the carbon found in fruits at harvest is imported by the phloem. Imported carbon provide the material needed for the accumulation of sugars, organic acids, secondary compounds, in addition to the material needed for the synthesis of cell walls. The accumulation of sugars during fruit development influences not only sweetness but also various parameters controlling fruit composition (fruit \"quality\"). The accumulation of organic acids and sugar in grape berry flesh cells is a key process for berry development and ripening. The present review presents an update of the research on grape berry development, anatomical structure, sugar and acid metabolism, sugar transporters, and regulatory factors.
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  • 文章类型: Journal Article
    在这项研究中,采用阿拉伯树胶(GA)涂层减轻桃果的冷害,并且观察到10%GA涂层表现出最有利的效果。GA涂层显著抑制了桃果实中AsA含量的下降,增强了抗氧化酶活性,从而提高活性氧(ROS)的清除速率,同时减少其积累。同时,GA涂层抑制了酚类的氧化降解酶的活性,并增强了合酶的活性,从而保持水果中总酚类和类黄酮的较高水平。此外,与对照水果相比,GA涂层的水果显示出更高浓度的蔗糖和山梨糖醇,伴随着更强大的蔗糖合酶和蔗糖磷酸合酶的活性,以及酸性转化酶和中性转化酶的活性降低。我们的研究表明,GA涂层可以通过调节ROS有效提高桃果实的抗寒性。酚类物质,和糖代谢,保持高水平的酚类和蔗糖,同时增强抗氧化活性。
    In this study, gum arabic (GA) coating was employed to mitigate chilling injury in peach fruit, and it was observed that 10% GA coating exhibited the most favorable effect. GA coating significantly inhibited the decline of AsA content and enhanced antioxidant enzyme activity in peach fruit, thereby enhancing reactive oxygen species (ROS) scavenging rate while reducing its accumulation. Simultaneously, GA coating inhibited the activity of oxidative degradation enzymes for phenolics and enhanced synthase activity, thus maintaining higher levels of total phenolics and flavonoids in fruits. Additionally, compared to the control fruit, GA-coated fruits demonstrated higher concentrations of sucrose and sorbitol, accompanied more robust activity of sucrose synthase and sucrose phosphate synthase, as well as reduced activity of acid invertase and neutral invertase. Our study demonstrates that GA coating can effectively enhance the cold resistance of peach fruit by regulating ROS, phenolics, and sugar metabolism, maintaining high levels of phenolics and sucrose while enhancing antioxidant activity.
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