stress adaptation

应激适应
  • 文章类型: Journal Article
    在这项研究中,评估了切碎的猪肉中的单核细胞增生李斯特菌对食品加工过程中环境压力对热处理和胃液的抵抗力的变化。细菌暴露在寒冷的压力下,随后连续暴露于不同的应激源(乳酸(LA),NaCl,或Nisin),接着是热处理,最后,确定了他们的胃肠道耐受性。适应NaCl胁迫会降低单核细胞增生李斯特菌对随后的LA和Nisin胁迫的耐受性。适应LA胁迫可增加NaCl和Nisin胁迫环境中的细菌存活率。适应Nisin胁迫的细菌对随后的胁迫条件的耐受性没有变化。此外,用NaCl和LA处理增强了单核细胞增生李斯特菌的耐热性,但用Nisin治疗会降低细菌的耐热性。几乎所有的连续胁迫都降低了单一胁迫对细菌耐热性的影响。添加LA和Nisin作为第二步应激降低了单核细胞增生李斯特菌对胃液的耐受性,而NaCl的添加增强了其耐受性。这项研究的结果有望为肉类保存和加工提供信息,并减少由于压力适应而导致的食源性病原体风险评估的不确定性。
    In this study, Listeria monocytogenes from minced pork was evaluated for changes in resistance to thermal treatment and gastric fluid following environmental stresses during food processing. Bacteria were exposed to cold stress, followed by successive exposures to different stressors (lactic acid (LA), NaCl, or Nisin), followed by thermal treatments, and finally, their gastrointestinal tolerance was determined. Adaptation to NaCl stress reduced the tolerance of L. monocytogenes to subsequent LA and Nisin stress. Adaptation to LA stress increased bacterial survival in NaCl and Nisin-stressed environments. Bacteria adapted to Nisin stress showed no change in tolerance to subsequent stress conditions. In addition, treatment with NaCl and LA enhanced the thermal tolerance of L. monocytogenes, but treatment with Nisin decreased the thermal tolerance of the bacteria. Almost all of the sequential stresses reduced the effect of a single stress on bacterial thermal tolerance. The addition of LA and Nisin as a second step of stress reduced the tolerance of L. monocytogenes to gastric fluid, whereas the addition of NaCl enhanced its tolerance. The results of this study are expected to inform processing conditions and sequences for meat preservation and processing and reduce uncertainty in risk assessment of foodborne pathogens due to stress adaptation.
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  • 文章类型: Journal Article
    作为固着生物,植物不断面临各种非生物胁迫,比如干旱,盐度,和金属/类金属毒性,所有这些都对植物生长和产量潜力具有重大威胁。提高植物对这种非生物胁迫的抵抗力对于在全球范围内实施可持续农业至关重要。乙酸/乙酸盐已被认为是一种重要的代谢产物,在调节植物对多种非生物胁迫的适应中具有多方面的作用。最近的研究表明,乙酸可以通过调节脂质代谢来增强植物抵抗非生物胁迫的不利影响的固有机制。激素信号,表观遗传变化,和生理防御机制。许多研究也支持乙酸在不利环境条件下促进作物生产的潜在用途。这篇综述提供了对乙酸如何调节植物光合作用的理解的全面更新,作为一种抗蒸剂,解毒活性氧以减轻氧化应激,与植物激素相互作用来调节生理过程,提高土壤肥力和微生物多样性,特别关注干旱,盐度,和金属毒性。我们还强调了乙酸的生态友好和经济潜力,这可能会吸引发展中国家的农民利用乙酸应用的好处来提高农作物的非生物胁迫抗性。鉴于乙酸是一种广泛获得的,便宜,和环保化合物,乙酸介导的调节途径及其与其他信号分子的串扰的揭示对于制定减轻作物非生物胁迫的可持续策略具有重要意义。
    As sessile organisms, plants constantly face a variety of abiotic stresses, such as drought, salinity, and metal/metalloid toxicity, all of which possess significant threats to plant growth and yield potential. Improving plant resilience to such abiotic stresses bears paramount importance in practicing sustainable agriculture worldwide. Acetic acid/acetate has been recognized as an important metabolite with multifaceted roles in regulating plant adaptation to diverse abiotic stresses. Recent studies have elucidated that acetic acid can potentiate plants\' inherent mechanisms to withstand the adverse effects of abiotic stresses through the regulation of lipid metabolism, hormone signaling, epigenetic changes, and physiological defense mechanisms. Numerous studies also underpin the potential use of acetic acid in boosting crop production under unfavorable environmental conditions. This review provides a comprehensive update on the understanding of how acetic acid regulates plant photosynthesis, acts as an antitranspirant, detoxifies reactive oxygen species to alleviate oxidative stress, interacts with phytohormones to regulate physiological processes, and improves soil fertility and microbial diversity, with a specific focus on drought, salinity, and metal toxicity. We also highlight the eco-friendly and economic potential of acetic acid that may attract farmers from developing countries to harness the benefits of acetic acid application for boosting abiotic stress resistance in crops. Given that acetic acid is a widely accessible, inexpensive, and eco-friendly compound, the revelation of acetic acid-mediated regulatory pathways and its crosstalk with other signaling molecules will have significant importance in developing a sustainable strategy for mitigating abiotic stresses in crops.
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  • 文章类型: Journal Article
    所有生物体——从单细胞原核生物到无脊椎动物和人类——在其一生中经常面临许多挑战。这可能会损害它们的分子和细胞含量并威胁它们的生存。然而,这些不同的生物是,总的来说,对潜在威胁的适应能力很强。近年来,我们对这种新兴的生物复原力现象的机械理解取得了迅速进展,这使得细胞,组织和整个生物体从挑战或压力中反弹。在这篇文章中,我讨论了关于跨尺度驱动生物弹性的不同分子机制的最新知识,特别关注其动态性和适应性。我强调了新出现的证据,表明生物复原力的丧失可能导致许多病症,包括年龄相关的虚弱和退行性疾病。最后,我介绍了多学科的实验方法,这些方法有助于解开韧性的因果机制,以及如何在临床中治疗性地利用这种新兴知识。
    All living organisms - from single-celled prokaryotes through to invertebrates and humans - are frequently exposed to numerous challenges during their lifetime, which could damage their molecular and cellular contents and threaten their survival. Nevertheless, these diverse organisms are, on the whole, remarkably resilient to potential threats. Recent years have seen rapid advances in our mechanistic understanding of this emerging phenomenon of biological resilience, which enables cells, tissues and whole organisms to bounce back from challenges or stress. In this At a Glance article, I discuss current knowledge on the diverse molecular mechanisms driving biological resilience across scales, with particular focus on its dynamic and adaptive nature. I highlight emerging evidence that loss of biological resilience could underly numerous pathologies, including age-related frailty and degenerative disease. Finally, I present the multi-disciplinary experimental approaches that are helping to unravel the causal mechanisms of resilience and how this emerging knowledge could be harnessed therapeutically in the clinic.
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  • 文章类型: Journal Article
    厌氧氨氧化(anammox)细菌,这是近三十年前首次发现的,是处理含铵废水的关键。研究报道了生化氮转化过程和生理,系统发育,和厌氧氨氧化细菌的生态特征。很长一段时间,anammox细菌被认为具有自养的生活方式。然而,最近的研究表明anammox细菌的功能多功能性。基于基因组的分析和富集培养物的实验证明了厌氧氨氧化细菌的代谢活性与不同胁迫条件的关联,揭示了利用特定有机物质的重要性,包括器官自养,生长和适应压力条件。我们对有机物质的利用和代谢及其与anammox细菌中anammox反应的关联的理解正在增长,但仍不完整。在这次审查中,我们总结了环境胁迫条件下厌氧氨氧化细菌对有机物质利用的影响,强调它们潜在的有机自养活动和代谢灵活性。虽然大多数厌氧氨氧化细菌可能利用特定的有机物质,Ca.Brocadia表现出最高水平的混合自养活动。还研究了实质上影响厌氧氨氧化细菌有机自养活性的环境因素。这篇综述为厌氧氨氧化菌的有机自养能力提供了新的视角。
    Anaerobic ammonium oxidizing (anammox) bacteria, which were first discovered nearly three decades ago, are crucial for treating ammonium-containing wastewater. Studies have reported on the biochemical nitrogen conversion process and the physiological, phylogenic, and ecological features of anammox bacteria. For a long time, anammox bacteria were assumed to have a lithoautotrophic lifestyle. However, recent studies have suggested the functional versatility of anammox bacteria. Genome-based analysis and experiments with enrichment cultures have demonstrated the association of the metabolic activities of anammox bacteria with different stress conditions, revealing the importance of utilizing specific organic substances, including organoautotrophy, for growth and adaptation to stress conditions. Our understanding regarding the utilization and metabolism of organic substances and their associations with anammox reactions in anammox bacteria is growing but still incomplete. In this review, we summarize the effect of the utilization of organic substances by anammox bacteria under environmental stress conditions, emphasizing their potential organoautotrophic activity and metabolic flexibility. Although most anammox bacteria may utilize specific organic substances, Ca. Brocadia exhibited the highest level of mixoautotrophic activity. The environmental factors that substantially affect the organoautotrophic activities of anammox bacteria were also examined. This review provides a new perspective on the organoautotrophic capacity of anammox bacteria.
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  • 文章类型: Journal Article
    整合应激反应(ISR)是由环境改变激活的关键细胞信号传导途径,其抑制蛋白质合成以恢复稳态。为了防止持续的损害,ISR被生长停滞和DNA损伤诱导型34(GADD34)的上调所抵消,蛋白磷酸酶1的应激诱导调节亚基,介导翻译再激活和应激恢复。这里,我们发现了一种新的ISR调节机制,该机制在转录后控制编码GADD34的PPP1R15AmRNA的稳定性。我们确定PPP1R15AmRNA的3'非翻译区含有由ZFP36家族的蛋白质识别的活性富含AU的元件(ARE),促进其在正常条件下的快速衰变,并稳定GADD34的有效表达以响应胁迫。我们将PPP1R15AmRNA转换的严格时间控制确定为瞬时ISR记忆的组成部分,它设定了细胞反应性的阈值,并介导对重复应激条件的适应。
    The integrated stress response (ISR) is a key cellular signaling pathway activated by environmental alterations that represses protein synthesis to restore homeostasis. To prevent sustained damage, the ISR is counteracted by the upregulation of growth arrest and DNA damage-inducible 34 (GADD34), a stress-induced regulatory subunit of protein phosphatase 1 that mediates translation reactivation and stress recovery. Here, we uncover a novel ISR regulatory mechanism that post-transcriptionally controls the stability of PPP1R15A mRNA encoding GADD34. We establish that the 3\' untranslated region of PPP1R15A mRNA contains an active AU-rich element (ARE) recognized by proteins of the ZFP36 family, promoting its rapid decay under normal conditions and stabilization for efficient expression of GADD34 in response to stress. We identify the tight temporal control of PPP1R15A mRNA turnover as a component of the transient ISR memory, which sets the threshold for cellular responsiveness and mediates adaptation to repeated stress conditions.
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  • 文章类型: Journal Article
    在拟南芥中已鉴定出四种不同类型的硫酸化肽。这些肽在调节植物发育和胁迫适应中起着至关重要的作用。最近的研究表明,黄单胞菌和根结线虫可以分泌植物样硫酸化肽,利用植物硫酸化信号通路抑制植物免疫。在过去的三十年里,这四种类型的硫酸化肽的受体都已被鉴定,所有这些都属于富含亮氨酸的重复受体样蛋白激酶(LRR-RLK)亚家族的成员。许多调节蛋白被证明在其相应的信号转导途径中起重要作用。在这次审查中,我们全面总结了主要在拟南芥中发现的硫酸化肽及其受体。我们还讨论了它们在植物发育和胁迫适应中的已知生物学功能。最后,我们提出了一些问题,供今后的研究参考。
    Four distinct types of sulfated peptides have been identified in Arabidopsis thaliana. These peptides play crucial roles in regulating plant development and stress adaptation. Recent studies have revealed that Xanthomonas and Meloidogyne can secrete plant-like sulfated peptides, exploiting the plant sulfated peptide signaling pathway to suppress plant immunity. Over the past three decades, receptors for these four types of sulfated peptides have been identified, all of which belong to the leucine-rich repeat receptor-like protein kinase subfamily. A number of regulatory proteins have been demonstrated to play important roles in their corresponding signal transduction pathways. In this review, we comprehensively summarize the discoveries of sulfated peptides and their receptors, mainly in Arabidopsis thaliana. We also discuss their known biological functions in plant development and stress adaptation. Finally, we put forward a number of questions for reference in future studies.
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  • 文章类型: Journal Article
    Haberlearhodopensis,一个复活的物种,是已知唯一能够在多种极端环境中生存的植物,包括干燥,冻结温度,和长期的黑暗。然而,对这些应力耐受性的分子机制研究甚少。这里,我们提出了一个高质量的Haberlea基因组,发现44,306个基因中的〜23.55%是孤儿。比较基因组学分析确定了89个显著扩展的基因家族,其中25个是Haberlea特有的。此外,我们证明,即使在长时间的完全黑暗中,哈伯利亚也能保留其复活潜力。经历干燥的植物的转录组分析,黑暗,低温揭示了这些应力的共同和特定足迹,和他们的组合。例如,蛋白质磷酸酶2C(PP2C)基因在所有胁迫组合中基本上被诱导,而植物铬相互作用因子1(PIF1)和生长反应因子4(GRF4)仅在黑暗中诱导。此外,733个功能未知的基因和三个编码Haberlea特异性转录因子的基因在压力组合时被特异性诱导/抑制,使它们成为未来功能研究的有吸引力的目标。该研究提供了对基因组结构的全面了解,并报道了这种复活物种的多胁迫耐受性机制的详细信息,这将有助于制定使作物能够在极端和多种非生物胁迫下生存的策略。
    Haberlea rhodopensis, a resurrection species, is the only plant known to be able to survive multiple extreme environments, including desiccation, freezing temperatures, and long-term darkness. However, the molecular mechanisms underlying tolerance to these stresses are poorly studied. Here, we present a high-quality genome of Haberlea and found that ~ 23.55% of the 44,306 genes are orphan. Comparative genomics analysis identified 89 significantly expanded gene families, of which 25 were specific to Haberlea. Moreover, we demonstrated that Haberlea preserves its resurrection potential even in prolonged complete darkness. Transcriptome profiling of plants subjected to desiccation, darkness, and low temperatures revealed both common and specific footprints of these stresses, and their combinations. For example, PROTEIN PHOSPHATASE 2C (PP2C) genes were substantially induced in all stress combinations, while PHYTOCHROME INTERACTING FACTOR 1 (PIF1) and GROWTH RESPONSE FACTOR 4 (GRF4) were induced only in darkness. Additionally, 733 genes with unknown functions and three genes encoding transcription factors specific to Haberlea were specifically induced/repressed upon combination of stresses, rendering them attractive targets for future functional studies. The study provides a comprehensive understanding of the genomic architecture and reports details of the mechanisms of multi-stress tolerance of this resurrection species that will aid in developing strategies that allow crops to survive extreme and multiple abiotic stresses.
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  • 文章类型: Editorial
    涉及周期性刺激的实验揭示了酵母细胞中高渗胁迫与葡萄糖饥饿之间的相互作用。
    Experiments involving periodic stimuli shed light on the interplay between hyper-osmotic stress and glucose starvation in yeast cells.
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  • 文章类型: Editorial
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  • 文章类型: Journal Article
    转录物起始的启动子特异性激活在大肠杆菌和沙门氏菌中提供了重要的调控装置。这里,我们描述了不同的机制,专注于它们是如何进化来管理“内务管理”细菌转录机制的。一些机制涉及辅助细菌DNA依赖性RNA聚合酶或替换或重塑其一个亚基。其他人则针对染色体DNA,改善启动子功能,或者减轻压抑。我们讨论了不同的激活剂如何在启动子处协同工作以及当前复杂的转录因子网络如何进化。
    Promoter-specific activation of transcript initiation provides an important regulatory device in Escherichia coli and Salmonella. Here, we describe the different mechanisms that operate, focusing on how they have evolved to manage the \"housekeeping\" bacterial transcription machinery. Some mechanisms involve assisting the bacterial DNA-dependent RNA polymerase or replacing or remodeling one of its subunits. Others are directed to chromosomal DNA, improving promoter function, or relieving repression. We discuss how different activators work together at promoters and how the present complex network of transcription factors evolved.
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