空气和水环境污染的影响主要反映在土壤生态系统中,因为它会损害土壤功能。此外,因为土壤是数十亿生物的栖息地,生物多样性也随之改变。微生物是生态污染的精确传感器,和细菌在污染土壤的生物修复方面具有关键和重要的功能。因此,在目前的工作中,我们旨在通过IlluminaMiSeq测序技术评估身份不明的细菌种群及其在不同程度的石油污染土壤和污泥样品中的群落结构变化(老化,污泥,和渗漏土壤),以确定独特的细菌在修复中的潜在应用。研究表明,主要的细菌联盟,即,变形杆菌(57%),α变形杆菌(31%),和莫拉科(23%)存在于老化的土壤中,而变形杆菌(52%),α变形杆菌(33%),在污泥土壤中主要发现了红杆菌科(28%)。在渗漏土中,变形杆菌(59%),α变形杆菌(33%),和红杆菌科(29%)大量存在。维恩图用于分析三个土壤样品中各个操作分类单位(OTU)的丰度分布。数据过滤后,将它们分为OTU簇,从三个土壤样品中鉴定出329个OTU。在329个土壤样本中,共有160个OTU。使用α多样性指数和Shanon指数估算细菌多样性,发现老化土壤中的细菌多样性分别为4.490、4.073和4.631,污泥土和渗漏土,分别和类似的丰富度分别为618、417和418。热图由QIIME软件生成,并来自前50名富集的少数微生物,如假单胞菌,芽孢杆菌,分枝杆菌,鞘氨醇单胞菌和副球菌,显示在所有样本中。此外,我们还分析了土壤的各种理化性质,包括pH值,温度,盐度,电导率,碱度,总碳,总有机质,氮,计算土壤质量指数(SQI)。老年人的SQI,污泥和渗漏土壤样品分别为0.73、0.64和0.89。这些发现表明存在未开发的细菌物种,可将其应用于碳氢化合物的修复,并且还可以将其开发。
The impact of environmental pollution in air and water is reflected mainly in the soil ecosystem as it impairs soil functions. Also, since the soil is the habitat for billions of organisms, the biodiversity is in turn altered. Microbes are precise sensors of ecological contamination, and bacteria have a key and important function in terms of bioremediation of the contaminated soil. Hence in the current work, we aimed at assessing the unidentified bacterial population through Illumina MiSeq sequencing technology and their community structural changes in different levels of petroleum-contaminated soil and sludge samples (aged, sludge, and leakage soil) to identify unique bacteria for their potential application in remediation. The studies showed that major bacterial consortiums namely, Proteobacteria (57%), Alphaproteobacteria (31%), and Moraxellaceae (23%) were present in aged soil, whereas Proteobacteria (52%), Alphaproteobacteria (33%), and Rhodobacteraceae (28%) were dominantly found in sludge soil. In leakage soil, Proteobacteria (59%), Alphaproteobacteria (33%), and Rhodobacteraceae (29%) were abundantly present. The Venn diagrams are used to analyze the distribution of abundances in individual operational taxonomic units (OTUs) within three soil samples. After data filtering, they were grouped into OTU clusters and 329 OTUs were identified from the three soil samples. Among the 329, 160 OTUs were common in the three soil samples. The bacterial diversity is estimated using alpha diversity indices and Shanon index and was found to be 4.490, 4.073 and 4.631 in aged soil, sludge soil and leakage soil, respectively and similarly richness was found to be 618, 417 and 418. The heat map was generated by QIIME software and from the top 50 enriched genera few microbes such as Pseudomonas, Bacillus, Mycobacterium, Sphingomonas and Paracoccus, were shown across all the samples. In addition, we also analyzed various physicochemical properties of soil including pH, temperature, salinity, electrical conductivity, alkalinity, total carbon, total organic matter, nitrogen, phosphorus and potassium to calculate the soil quality index (SQI). The SQI of aged, sludge and leakage soil samples were 0.73, 0.64, and 0.89, respectively. These findings show the presence of unexplored bacterial species which could be applied for hydrocarbon remediation and further they can be exploited for the same.