polycystic kidney disease

多囊肾病
  • 文章类型: Editorial
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  • 文章类型: Journal Article
    Mayo成像分类模型(MICM)需要进行步骤前定性评估,以确定患者是在1类(典型)还是2类(非典型),其中被分配到2级的患者被排除在MICM申请之外。
    我们开发了一种基于深度学习的方法,可以从磁共振(MR)图像中自动分类1类和2类,并利用来自486名受试者的腹部T2加权MR图像提供分类置信度。应用迁移学习的地方。此外,说明了可解释的人工智能(XAI)方法可以增强自动分类结果的可解释性。对于绩效评估,产生混淆矩阵,绘制受试者工作特性曲线,测量曲线下面积。
    所提出的方法对第1类(97.7%)和第2类(100%)的分类表现出优异的性能,其中组合测试准确度为98.01%。预测1类的准确率和召回率分别为1.00和0.98,F1评分为0.99;而预测2级的分别为0.87和1.00,F1-得分为0.93。准确率和召回率的加权平均值分别为0.98和0.98,显示分类置信度得分,而XAI方法突出显示了分类的贡献区域。
    所提出的自动化方法可以将1类和2类病例分类得与人类专家的水平一样准确。此方法可能是促进研究不同类型肾脏形态的临床试验以及常染色体显性多囊肾病(ADPKD)患者的临床治疗的有用工具。
    UNASSIGNED: The Mayo imaging classification model (MICM) requires a prestep qualitative assessment to determine whether a patient is in class 1 (typical) or class 2 (atypical), where patients assigned to class 2 are excluded from the MICM application.
    UNASSIGNED: We developed a deep learning-based method to automatically classify class 1 and 2 from magnetic resonance (MR) images and provide classification confidence utilizing abdominal T 2 -weighted MR images from 486 subjects, where transfer learning was applied. In addition, the explainable artificial intelligence (XAI) method was illustrated to enhance the explainability of the automated classification results. For performance evaluations, confusion matrices were generated, and receiver operating characteristic curves were drawn to measure the area under the curve.
    UNASSIGNED: The proposed method showed excellent performance for the classification of class 1 (97.7%) and 2 (100%), where the combined test accuracy was 98.01%. The precision and recall for predicting class 1 were 1.00 and 0.98, respectively, with F 1 -score of 0.99; whereas those for predicting class 2 were 0.87 and 1.00, respectively, with F 1 -score of 0.93. The weighted averages of precision and recall were 0.98 and 0.98, respectively, showing the classification confidence scores whereas the XAI method well-highlighted contributing regions for the classification.
    UNASSIGNED: The proposed automated method can classify class 1 and 2 cases as accurately as the level of a human expert. This method may be a useful tool to facilitate clinical trials investigating different types of kidney morphology and for clinical management of patients with autosomal dominant polycystic kidney disease (ADPKD).
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  • 文章类型: Editorial
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  • 文章类型: Journal Article
    Orexin-A是下丘脑外侧的神经肽产物,作用于两种受体,OX1R和OX2R。食欲能系统参与喂养,睡眠,和压力调节。最近,已发现食欲素A水平与肾功能呈负相关。这里,我们分析了食欲素-A的水平,以及在降血糖素神经肽前体(HCRT)及其受体的SNPs的发生率,HCRTR1和HCRTR2,在64例常染色体显性遗传多囊肾病(ADPKD)患者中,携带PKD1或PKD2基因截短突变。24名健康志愿者组成对照组。通过ELISA评估血清食欲素-A,而SNP通过Sanger测序进行了研究。评估了与PKD患者主要临床特征的相关性。PKD患者肾功能受损(平均eGFR为67.8±34.53),收缩压高于对照组(p<0.001)。此外,PKD患者的食欲素A水平在统计学上高于健康对照组(477.07±69.42pg/mLvs.321.49±78.01pg/mL;p<0.001)。此外,食欲素-A与血压呈负相关(p=0.0085),同时发现与PKD患者的eGFR有直接相关性。分析的SNP均未显示与PKD中的食欲素-A水平有任何关联。总之,我们的数据强调了食欲素-A在肾脏生理学中的新作用及其与PKD的潜在相关性.进一步的研究对于阐明肾功能中食欲素A信号传导的复杂机制及其对PKD和相关心血管并发症的治疗意义至关重要。
    Orexin-A is a neuropeptide product of the lateral hypothalamus that acts on two receptors, OX1R and OX2R. The orexinergic system is involved in feeding, sleep, and pressure regulation. Recently, orexin-A levels have been found to be negatively correlated with renal function. Here, we analyzed orexin-A levels as well as the incidence of SNPs in the hypocretin neuropeptide precursor (HCRT) and its receptors, HCRTR1 and HCRTR2, in 64 patients affected by autosomal dominant polycystic kidney disease (ADPKD) bearing truncating mutations in the PKD1 or PKD2 genes. Twenty-four healthy volunteers constituted the control group. Serum orexin-A was assessed by ELISA, while the SNPs were investigated through Sanger sequencing. Correlations with the main clinical features of PKD patients were assessed. PKD patients showed impaired renal function (mean eGFR 67.8 ± 34.53) and a statistically higher systolic blood pressure compared with the control group (p < 0.001). Additionally, orexin-A levels in PKD patients were statistically higher than those in healthy controls (477.07 ± 69.42 pg/mL vs. 321.49 ± 78.01 pg/mL; p < 0.001). Furthermore, orexin-A inversely correlated with blood pressure (p = 0.0085), while a direct correlation with eGFR in PKD patients was found. None of the analyzed SNPs showed any association with orexin-A levels in PKD. In conclusion, our data highlights the emerging role of orexin-A in renal physiology and its potential relevance to PKD. Further research is essential to elucidate the intricate mechanisms underlying orexin-A signaling in renal function and its therapeutic implications for PKD and associated cardiovascular complications.
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  • 文章类型: Journal Article
    多囊肾病是全球最普遍的遗传性肾病,主要与PKD1基因的过度表达有关。迄今为止,多囊肾病没有有效的治疗方法,和实践治疗仅提供症状缓解。通过在疾病条件下抑制PKD1基因的表达来发现靶向PKD1基因的化合物对于有效的药物开发可能是至关重要的。在这项研究中,分子对接和分子动力学模拟,QSAR,和基于MM/GBSA的方法用于从1379个化合物的文库中确定Pkd1酶的推定抑制剂。最初,使用MOE和AutoDock工具,基于它们与Pkd1酶的结合亲和力,选择14种化合物。进一步研究所选择的药物以探索它们作为药物候选物的性质以及它们与Pkd1酶形成复合物的稳定性。基于物理化学和ADMET(吸收,Distribution,代谢,排泄,和毒性)特性,和毒性分析,我们选择了两种化合物,包括奥沙拉嗪和地秋美素进行下游分析,因为它们在对接实验中表现出最佳的药物相似特性和与Pkd1的最高结合亲和力.使用Gromacs的分子动力学模拟进一步证实了奥沙拉嗪和Diosmetin与Pkd1的复合物的稳定性,并通过与蛋白质的特定残基的强键合建立了相互作用。使用3DQSAR和Schrodinger模块计算的两种复合物的高生物活性和结合自由能,分别进一步验证了我们的结果。因此,本研究中使用的基于分子对接和动力学模拟的计算机模拟方法显示,奥沙拉嗪和地美汀是靶向Pkd1酶对抗多囊肾疾病的潜在候选药物.
    Polycystic kidney disease is the most prevalent hereditary kidney disease globally and is mainly linked to the overexpression of a gene called PKD1. To date, there is no effective treatment available for polycystic kidney disease, and the practicing treatments only provide symptomatic relief. Discovery of the compounds targeting the PKD1 gene by inhibiting its expression under the disease condition could be crucial for effective drug development. In this study, a molecular docking and molecular dynamic simulation, QSAR, and MM/GBSA-based approaches were used to determine the putative inhibitors of the Pkd1 enzyme from a library of 1379 compounds. Initially, fourteen compounds were selected based on their binding affinities with the Pkd1 enzyme using MOE and AutoDock tools. The selected drugs were further investigated to explore their properties as drug candidates and the stability of their complex formation with the Pkd1 enzyme. Based on the physicochemical and ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity) properties, and toxicity profiling, two compounds including olsalazine and diosmetin were selected for the downstream analysis as they demonstrated the best drug-likeness properties and highest binding affinity with Pkd1 in the docking experiment. Molecular dynamic simulation using Gromacs further confirmed the stability of olsalazine and diosmetin complexes with Pkd1 and establishing interaction through strong bonding with specific residues of protein. High biological activity and binding free energies of two complexes calculated using 3D QSAR and Schrodinger module, respectively further validated our results. Therefore, the molecular docking and dynamics simulation-based in-silico approach used in this study revealed olsalazine and diosmetin as potential drug candidates to combat polycystic kidney disease by targeting Pkd1 enzyme.
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  • 文章类型: Case Reports
    常染色体显性遗传性多囊肾病(ADPKD)是以肾脏肿大为特征的最常见的遗传性多囊肾病,导致肾衰竭.在印度尼西亚,由于有关ADPKD的报道有限,目前尚不清楚该疾病的确切患病率.这项研究的目的是报告一例患有多种并发症的ADPKD患者。一名54岁的男性出现在Soetomo学术总医院的急诊室,泗水,印度尼西亚,主诉深红色尿液一周。在过去的五年里,腹部逐渐增大,在过去的一个月里变得更加紧张和僵化。患者有疲劳和高血压病史,常规随访。入院时体检显示生命体征正常,腹部评估显示,右上腹部有一个约4厘米大小的硬块。实验室检查提示贫血,白细胞增多,淋巴细胞减少,蛋白尿,血尿,白细胞增多症,血清肌酐和尿素水平升高。腹部超声成像,计算机断层扫描(CT)扫描,磁共振成像(MRI)显示双侧肾脏和肝脏肿大包含多个囊肿,提示多囊肾和肝脏疾病。左肾极中部囊肿破裂,CT扫描发现腹水最少。MRI显示两个肾脏都有多个囊肿,部分充满了血液。患者被诊断为ADPKD,肉眼血尿,急性或慢性肾脏疾病(CKD),尿路感染(UTI),正常变色-正常细胞性贫血,和代谢性酸中毒.饮食控制高热量,高蛋白,和低盐饮食;液体平衡;和其他有症状的药物开始。至关重要的是要意识到与ADPKD快速进展相关的危险因素,以便能够对疾病的预防和管理产生有利的影响。
    Autosomal dominant polycystic kidney disease (ADPKD) is the most common hereditary polycystic kidney disease characterized by renal enlargement, resulting in renal failure. In Indonesia, the exact prevalence of ADPKD is unknown due to limited reports on the disease. The aim of this study was to report a case of a patient with ADPKD with multiple complications. A 54-year-old male presented to the emergency room of Dr. Soetomo Academic General Hospital, Surabaya, Indonesia, with a chief complaint of dark-red-colored urine for one week. There was a progressive abdominal enlargement over the past five years, which had become more tense and rigid for the past one month. The patient had a history of fatigue and hypertension with routine follow-up. Physical examination on admission showed normal vital signs, and the abdominal assessment revealed a palpable hard mass approximately 4 cm in size in the right upper abdomen. Laboratory test indicated anemia, leukocytosis, lymphopenia, proteinuria, hematuria, leukocyturia, and elevated serum creatinine and urea levels. Abdominal imaging using ultrasonography, computed tomography (CT) scan, and magnetic resonance imaging (MRI) revealed bilateral kidney and liver enlargement containing multiple cysts, suggesting polycystic kidney and liver disease. There was a ruptured cyst in the middle of the left kidney pole with minimal ascites found in the CT scan. The MRI exhibited the presence of multiple cysts in both kidneys, partially filled with blood. The patient was diagnosed with ADPKD, gross hematuria, acute or chronic kidney disease (CKD), urinary tract infection (UTI), normochromic-normocytic anemia, and metabolic acidosis. Dietary control with high-calorie, high-protein, and low-salt diet; fluid balance; and other symptomatic medications were initiated. It is critical to be aware of risk factors associated with the rapid progression of ADPKD in order to be able to provide a favorable impact on the disease prevention and management.
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  • 文章类型: Case Reports
    Alport综合征(AS)是最常见的遗传性肾小球疾病,它是由COL4A3,COL4A4和COL4A5致病变种引起的。与AS相关的经典表型谱范围从孤立的血尿到肾外异常的慢性肾脏疾病(CKD)。这种疾病的非典型表现是可能的,会误导诊断.多囊肾病(PKD),由于PKD1和PKD2杂合变异,最常与常染色体显性PKD(ADPKD)相关,正在成为COL4A3-A5患者的一种可能的临床表现。我们描述了COL4A5新颖的家族移码变体(NM_000495.5:c.1095dupp.(Leu366ValfsTer45)),这与半合子有问题的AS和PKD有关,以及PKD,杂合子母亲的IgA肾小球肾炎和局灶节段肾小球硬化(FSGS)。建立AS的诊断有时可能很困难,特别是在误导性家族史和非典型表型特征的背景下。本案例研究支持COL4A3-A5相关疾病中出现的基因型和表型异质性,以及最近描述的PKD与IV型胶原(Col4)缺陷之间的关联。我们强调了所有家庭成员准确表型的重要性以及下一代测序在遗传性肾脏疾病鉴别诊断中的相关性。
    Alport Syndrome (AS) is the most common genetic glomerular disease, and it is caused by COL4A3, COL4A4, and COL4A5 pathogenic variants. The classic phenotypic spectrum associated with AS ranges from isolated hematuria to chronic kidney disease (CKD) with extrarenal abnormalities. Atypical presentation of the disorder is possible, and it can mislead the diagnosis. Polycystic kidney disease (PKD), which is most frequently associated with Autosomal Dominant PKD (ADPKD) due to PKD1 and PKD2 heterozygous variants, is emerging as a possible clinical manifestation in COL4A3-A5 patients. We describe a COL4A5 novel familial frameshift variant (NM_000495.5: c.1095dup p.(Leu366ValfsTer45)), which was associated with AS and PKD in the hemizygous proband, as well as with PKD, IgA glomerulonephritis and focal segmental glomerulosclerosis (FSGS) in the heterozygous mother. Establishing the diagnosis of AS can sometimes be difficult, especially in the context of misleading family history and atypical phenotypic features. This case study supports the emerging genotypic and phenotypic heterogeneity in COL4A3-A5-associated disorders, as well as the recently described association between PKD and collagen type IV (Col4) defects. We highlight the importance of the accurate phenotyping of all family members and the relevance of next-generation sequencing in the differential diagnosis of hereditary kidney disease.
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  • 文章类型: Journal Article
    背景:我们关注中性粒细胞明胶酶相关脂质运载蛋白(NGAL)和常染色体显性遗传多囊肾病(ADPKD)进展。
    方法:包括估计肾小球滤过率(eGFR)≥30mL/min/1.73m2的ADPKD患者。血清NGAL水平和NGAL与eGFR比值(NGR),最初评估身高调整后的总肾脏体积(hTKV).患者随访5年。
    结果:纳入61例患者,初始eGFR为73.6(48.9-101.5)ml/min/1.73ml。EGFR每年下降3.7mL/min/1.73m2。34例患者(55.7%)表现出快速进展。快速进展组具有较低的血清NGAL水平(p<0.001)和较高的hTKV(p<0.001)。较低的血清NGAL水平是快速进展的危险因素(p<0.001)。NGR与快速进展无关。血清NGAL水平可预测快速进展ROC分析(截止值<10.62ng/mL)。
    结论:相对较低的血清NGAL水平可以预测ADPKD的不良预后,并可以提供ADPKD患者的危险分层。
    BACKGROUND: We focused on neutrophil gelatinase-associated lipocalin (NGAL) and autosomal dominant polycystic kidney disease (ADPKD) progression.
    METHODS: ADPKD patients with an estimated glomerular filtration rate (eGFR) ≥ 30 mL/min/1.73 m2 were included. Serum NGAL level and NGAL to eGFR ratio (NGR), height-adjusted total kidney volume (hTKV) were assessed initially. Patients were followed-up for 5 years.
    RESULTS: Sixty one patients were enrolled and initial eGFR was 73.6 (48.9-101.5) ml/min/1.73m2. EGFR declined by 3.7 mL/min/1.73m2 per year. Thirty four patients (55.7%) exhibited rapid progression. Rapid progression group had lower serum NGAL levels (p < 0.001) and higher hTKV (p < 0.001). Lower serum NGAL level was a risk factor for rapid progression (p < 0.001). NGR was not associated with rapid progression. Serum NGAL level was predictive in for rapid progression ROC analysis (cut-off <10.62 ng/mL).
    CONCLUSIONS: Relatively lower serum NGAL levels can predict worse outcomes in ADPKD and can provide risk stratification in patients with ADPKD.
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  • 文章类型: Journal Article
    常染色体多囊肾病(ADPKD)是肾衰竭最常见的遗传形式,反映管理中未满足的需求。唯一批准的治疗(托伐普坦)的处方仅限于进展迅速的ADPKD患者。快速进展可以通过评估肾小球滤过率(GFR)下降来诊断。通常从基于血清肌酐(eGFRcr)或胱抑素C(eGFRcys)的方程中估计(eGFR)。我们已经评估了eGFR下降和快速进展(快速eGFR损失)之间的一致性。和测量的GFR(mGFR)下降(快速mGFR损失)使用碘海醇清除率在140名成人ADPKD与≥3mGFR和eGFR评估,其中97人也进行了eGFRcys评估。mGFR和eGFR下降之间的一致性较差:方法下降之间的平均一致性相关系数(CC)较低(0.661,范围0.628至0.713),Bland和Altman在eGFR和mGFR下降之间的协议界限很宽。eGFRcys的CCC较低。从实践的角度来看,在约37%的病例中,基于肌酐的公式未能检测到快速mGFR丢失(-3mL/min/y或更快).此外,公式错误地表明,大约40%的中度或稳定下降的病例为快速进展者。与快速进展患者相比,非快速进展患者组检测真实mGFR下降的公式可靠性较低。eGFRcys和eGFRcr-cys方程的性能更差。总之,eGFR下降可能在相当比例的患者中歪曲ADPKD的mGFR下降,可能将其错误分类为进展者或非进展者,并影响开始托伐普坦治疗的决定。
    Autosomal polycystic kidney disease (ADPKD) is the most common genetic form of kidney failure, reflecting unmet needs in management. Prescription of the only approved treatment (tolvaptan) is limited to persons with rapidly progressing ADPKD. Rapid progression may be diagnosed by assessing glomerular filtration rate (GFR) decline, usually estimated (eGFR) from equations based on serum creatinine (eGFRcr) or cystatin-C (eGFRcys). We have assessed the concordance between eGFR decline and identification of rapid progression (rapid eGFR loss), and measured GFR (mGFR) declines (rapid mGFR loss) using iohexol clearance in 140 adults with ADPKD with ≥3 mGFR and eGFRcr assessments, of which 97 also had eGFRcys assessments. The agreement between mGFR and eGFR decline was poor: mean concordance correlation coefficients (CCCs) between the method declines were low (0.661, range 0.628 to 0.713), and Bland and Altman limits of agreement between eGFR and mGFR declines were wide. CCC was lower for eGFRcys. From a practical point of view, creatinine-based formulas failed to detect rapid mGFR loss (-3 mL/min/y or faster) in around 37% of the cases. Moreover, formulas falsely indicated around 40% of the cases with moderate or stable decline as rapid progressors. The reliability of formulas in detecting real mGFR decline was lower in the non-rapid-progressors group with respect to that in rapid-progressor patients. The performance of eGFRcys and eGFRcr-cys equations was even worse. In conclusion, eGFR decline may misrepresent mGFR decline in ADPKD in a significant percentage of patients, potentially misclassifying them as progressors or non-progressors and impacting decisions of initiation of tolvaptan therapy.
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  • 文章类型: Journal Article
    托伐普坦是美国食品和药物管理局批准的唯一减缓常染色体显性遗传性多囊肾病(ADPKD)进展的药物,但由于潜在的严重不良事件,它需要严格的临床监测.
    我们旨在分享我们在开发和实施基于电子健康记录(EHR)的应用程序以监测使用托伐普坦的ADPKD患者方面的经验。
    该应用程序是根据我们的临床方案与临床信息学专业人员合作开发的,并进行频繁的实验室测试监测,以检测早期与药物相关的毒性。该应用程序简化了临床工作流程,并使我们的护理团队能够实时采取适当措施,以防止与药物相关的严重不良事件。我们回顾性分析了入选患者的特征。
    截至2022年9月,共有214名患者在所有梅奥诊所中心参加了托伐普坦计划。其中,126人在托伐普坦监测注册申请中登记,88人在过去的托伐普坦患者申请中登记。入组时的平均年龄为43.1(SD9.9)岁。共有20例(9.3%)患者出现肝毒性,但只有5人(2.3%)不得不停药。2个基于EHR的应用程序允许在个人或人群级别整合所有必要的患者信息和实时数据管理。这种方法促进了高效的员工工作流程,监测与药物相关的不良事件,并及时续开处方。
    我们的研究强调了将数字应用整合到EHR工作流程中的可行性,以促进为参加托伐普坦计划的患者提供高效和安全的护理。此工作流程需要进一步验证,但可以扩展到其他需要药物监测的慢性病管理医疗保健系统。
    UNASSIGNED: Tolvaptan is the only US Food and Drug Administration-approved drug to slow the progression of autosomal dominant polycystic kidney disease (ADPKD), but it requires strict clinical monitoring due to potential serious adverse events.
    UNASSIGNED: We aimed to share our experience in developing and implementing an electronic health record (EHR)-based application to monitor patients with ADPKD who were initiated on tolvaptan.
    UNASSIGNED: The application was developed in collaboration with clinical informatics professionals based on our clinical protocol with frequent laboratory test monitoring to detect early drug-related toxicity. The application streamlined the clinical workflow and enabled our nursing team to take appropriate actions in real time to prevent drug-related serious adverse events. We retrospectively analyzed the characteristics of the enrolled patients.
    UNASSIGNED: As of September 2022, a total of 214 patients were enrolled in the tolvaptan program across all Mayo Clinic sites. Of these, 126 were enrolled in the Tolvaptan Monitoring Registry application and 88 in the Past Tolvaptan Patients application. The mean age at enrollment was 43.1 (SD 9.9) years. A total of 20 (9.3%) patients developed liver toxicity, but only 5 (2.3%) had to discontinue the drug. The 2 EHR-based applications allowed consolidation of all necessary patient information and real-time data management at the individual or population level. This approach facilitated efficient staff workflow, monitoring of drug-related adverse events, and timely prescription renewal.
    UNASSIGNED: Our study highlights the feasibility of integrating digital applications into the EHR workflow to facilitate efficient and safe care delivery for patients enrolled in a tolvaptan program. This workflow needs further validation but could be extended to other health care systems managing chronic diseases requiring drug monitoring.
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