plant molecular farming

植物分子农业
  • 文章类型: Journal Article
    多功能抗HIVFc融合蛋白旨在通过多种作用模式有效地应对HIV。虽然结果很有希望,这些重组蛋白很难生产。这项研究探索了植物系统中抗HIVFc融合蛋白的产生和表征,特别是烟草benthamiana植物和烟草BY-2细胞悬浮液。通过整合密码子优化来优化植物中的Fc融合蛋白表达,ER保持信号,和疏水蛋白融合元件。在N.benthamiana中实现了成功的瞬时蛋白表达,通过N端疏水蛋白融合和ER保留信号实现的表达水平显着改善。烟草BY-2中的稳定表达导致不同的积累水平最高为2.2。mg/gDW。疏水蛋白的掺入显著增强了积累,为下游加工提供潜在的好处。质谱分析证实了ER保留信号和N-聚糖的存在。功能表征显示强结合CD64和CD16a受体,后者对于抗体依赖性细胞毒性(ADCC)很重要。与HIV抗原的相互作用表明潜在的中和能力。总之,这项研究强调了基于植物的系统产生功能性抗HIVFc融合蛋白的潜力,为开发这些新型HIV疗法提供了有希望的途径。
    Multifunctional anti-HIV Fc-fusion proteins aim to tackle HIV efficiently through multiple modes of action. Although results have been promising, these recombinant proteins are hard to produce. This study explored the production and characterization of anti-HIV Fc-fusion proteins in plant-based systems, specifically Nicotiana benthamiana plants and tobacco BY-2 cell suspension. Fc-fusion protein expression in plants was optimized by incorporating codon optimization, ER retention signals, and hydrophobin fusion elements. Successful transient protein expression was achieved in N. benthamiana, with notable improvements in expression levels achieved through N-terminal hydrophobin fusion and ER retention signals. Stable expression in tobacco BY-2 resulted in varying accumulation levels being at highest 2.2.mg/g DW. The inclusion of hydrophobin significantly enhanced accumulation, providing potential benefits for downstream processing. Mass spectrometry analysis confirmed the presence of the ER retention signal and of N-glycans. Functional characterization revealed strong binding to CD64 and CD16a receptors, the latter being important for antibody-dependent cellular cytotoxicity (ADCC). Interaction with HIV antigens indicated potential neutralization capabilities. In conclusion, this research highlights the potential of plant-based systems for producing functional anti-HIV Fc-fusion proteins, offering a promising avenue for the development of these novel HIV therapies.
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  • 文章类型: Journal Article
    分子农业,也被称为植物分子农业(PMF),是一种使用植物和植物细胞作为生物反应器生产重组蛋白的技术。这是一种具有成本效益和可持续的方法,可以生产大量用于各种应用的蛋白质,包括药品,疫苗,和工业酶。内源性或外源性信号肽(SP)侧翼在N-末端用于重组蛋白靶向和储存。这些SP负责将重组蛋白产物引导到植物细胞内的正确目的地或促进其分泌到细胞外空间中。在这一章中,我们将简要介绍由囊泡运输和蛋白质分泌的基础研究支持的当前PMF研究成果,根据我们对重组人艾杜糖醛酸酶的研究,主要介绍了亮黄2(BY-2)细胞分泌途径及其相关方案。
    Molecular farming, also known as plant molecular farming (PMF), is a technique that involves using plants and plant cells as bioreactors to produce recombinant proteins. This is a cost-effective and sustainable way of producing large quantities of proteins for various applications, including pharmaceuticals, vaccines, and industrial enzymes. An endogenous or exogenous signal peptide (SP) is flanked at the N-terminal for recombinant protein targeting and storage. These SPs are responsible for guiding the recombinant protein products to the correct destination within the plant cell or facilitating their secretion into the extracellular space. In this chapter, we will give a brief introduction of the current PMF research outcomes supported by the basic study of vesicle trafficking and protein secretion, mainly introducing the bright yellow 2 (BY-2) cell-based secretion pathway and its associated protocols according to our study of recombinant human iduronidase.
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  • 文章类型: Journal Article
    最近的COVID-19大流行揭示了全球诊断试剂盒的严重短缺,强调迫切需要利用所有可用资源来开发和生产诊断测试。不同的异源蛋白表达系统可用于抗原生产。这项研究评估了利用基于胡椒环斑病毒(PepRSV)的感染性克隆载体在本氏烟草中通过瞬时表达系统产生的新型SARS-CoV-2蛋白。这些蛋白包括截短的S1-N蛋白(刺突蛋白N末端残基12-316)和抗原N(核衣壳残基37-402)。评估了在大肠杆菌中表达的其他两种不同的SARS-CoV-2抗原:QCoV9嵌合抗原蛋白(刺突蛋白残基449-711和核衣壳蛋白残基160-406)和QCoV7截短的抗原(核衣壳残基37-402)。分别使用四种抗原和同一组样品进行ELISA以检测抗SARS-CoV-2IgG抗体。使用症状发作后5至65天住院的351名COVID-19患者的816份样本评估敏感性;使用2018年之前收集的195份样本,从麻风病人的家庭接触者中测试特异性。我们的研究结果表明了一致的测试灵敏度,范围从85%到88%,特异性为97.5%,无论SARS-CoV2抗原和用于生产的表达系统如何。我们的结果强调了植物表达系统作为产生重组抗原和开发诊断测试的有用替代平台的潜力。特别是在资源受限的环境中。
    The recent COVID-19 pandemic disclosed a critical shortage of diagnostic kits worldwide, emphasizing the urgency of utilizing all resources available for the development and production of diagnostic tests. Different heterologous protein expression systems can be employed for antigen production. This study assessed novel SARS-CoV-2 proteins produced by a transient expression system in Nicotiana benthamiana utilizing an infectious clone vector based on pepper ringspot virus (PepRSV). These proteins included the truncated S1-N protein (spike protein N-terminus residues 12-316) and antigen N (nucleocapsid residues 37-402). Two other distinct SARS-CoV-2 antigens expressed in Escherichia coli were evaluated: QCoV9 chimeric antigen protein (spike protein residues 449-711 and nucleocapsid protein residues 160-406) and QCoV7 truncated antigen (nucleocapsid residues 37-402). ELISAs using the four antigens individually and the same panel of samples were performed for the detection of anti-SARS-CoV-2 IgG antibodies. Sensitivity was evaluated using 816 samples from 351 COVID-19 patients hospitalized between 5 and 65 days after symptoms onset; specificity was tested using 195 samples collected before 2018, from domiciliary contacts of leprosy patients. Our findings demonstrated consistent test sensitivity, ranging from 85 % to 88 % with specificity of 97.5 %, regardless of the SARS-CoV2 antigen and the expression system used for production. Our results highlight the potential of plant expression systems as useful alternative platforms to produce recombinant antigens and for the development of diagnostic tests, particularly in resource-constrained settings.
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  • 文章类型: Journal Article
    根据先进的治疗药物产品(ATMP)和细胞农业选择,医疗保健和营养正面临范式转变。这两种选择都严重依赖于某种动物细胞培养,例如自体干细胞。这些文化需要各种生长因子,如白细胞介素-6和8(IL-6/8),在一个纯粹的,安全和可持续的形式,可以以可扩展的方式提供。植物似乎非常适合这项任务,因为小蛋白的纯化可以很容易地通过膜分离来实现。人/动物病原体不会在植物中复制,可以使用门内农业或农业实践扩大生产。这里,我们通过首先优化IL-6/8在烟草中翻译的密码子使用来说明这种能力。,以及在高通量植物细胞包(PCP)测定中测试非翻译区和靶向不同亚细胞区室的产物对表达的影响。在叶绿体中,IL-6累积达6.9±3.8(SD,n=2)和14.4±7.4mgkg-1(SD,在IL-8的情况下观察到n=5)。当将IL-8表达转移到整个植物中时,积累量为12.3±1.5mgkg-1(SD,n=3)。提取和澄清后,使用两阶段方法纯化IL-8,所述两阶段方法包括具有100kDa和10kDa截留膜的超滤/渗滤步骤,随后是IMAC精制步骤。纯度,收率和回收率为97.8%,6.6mgkg-1和38%,分别。我们评估了拟议的纯化方法去除内毒素的能力,以确保植物制造的生长因子与细胞培养物的相容性。
    Healthcare and nutrition are facing a paradigm shift in light of advanced therapy medicinal products (ATMPs) and cellular agriculture options respectively. Both options heavily rely on some sort of animal cell culture, e.g. autologous stem cells. These cultures require various growth factors, such as interleukin-6 and 8 (IL-6/8), in a pure, safe and sustainable form that can be provided in a scalable manner. Plants seem well suited for this task because purification of small proteins can be readily achieved by membrane separation, human/animal pathogens do not replicate in plants and production can be scaled up using in-door farming or agricultural practices. Here, we illustrate this capacity by first optimizing the codon usage of IL-6/8 for translation in Nicotiana spp., as well as testing the effect of untranslated regions and product targeting to different sub-cellular compartments on expression in a high-throughput plant cell pack (PCP) assay. In the chloroplast, IL-6 accumulated up to 6.9±3.8 (SD, n=2) and 14.4±7.4 mg kg-1 (SD, n=5) were observed in case of IL-8. When transferring IL-8 expression into whole plants, accumulation was 12.3±1.5 mg kg-1 (SD, n=3). After extraction and clarification, IL-8 was purified using a two-stage process consisting of an ultrafiltration/diafiltration step with 100 kDa and 10 kDa cut off membranes followed by an IMAC polishing step. The purity, yield and recovery were 97.8%, 6.6 mg kg-1 and 38%, respectively. We evaluated the ability of the proposed purification process to remove endotoxins to ensure the compatibility of plant-made growth factors with cell culture.
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  • 文章类型: Journal Article
    SARS-CoV-2的刺突蛋白受体结合域(RBD)是人类细胞感染所必需的。它是引发中和抗体的主要靶标,也是诊断试剂盒的主要组分。对这种蛋白质的大量需求导致使用植物作为生产平台。然而,有必要确定RBD的N-聚糖结构以研究其作为疫苗候选物或诊断试剂的功效和功能。这里,我们分析了水稻愈伤组织中产生的RBD的N-聚糖谱。在两个潜在的N-聚糖受体位点中,我们发现一个没有被利用,另一个含有复合型N-聚糖的混合物。这不同于当RBD在其他宿主中表达时发现的N-聚糖的异质混合物,包括Nicotianabenthamiana.通过比较不同宿主的糖基化谱,我们可以选择产生具有最有益的N-聚糖结构的RBD的平台,用于不同的应用。
    The spike protein receptor-binding domain (RBD) of SARS-CoV-2 is required for the infection of human cells. It is the main target that elicits neutralizing antibodies and also a major component of diagnostic kits. The large demand for this protein has led to the use of plants as a production platform. However, it is necessary to determine the N-glycan structures of an RBD to investigate its efficacy and functionality as a vaccine candidate or diagnostic reagent. Here, we analyzed the N-glycan profile of the RBD produced in rice callus. Of the two potential N-glycan acceptor sites, we found that one was not utilized and the other contained a mixture of complex-type N-glycans. This differs from the heterogeneous mixture of N-glycans found when an RBD is expressed in other hosts, including Nicotiana benthamiana. By comparing the glycosylation profiles of different hosts, we can select platforms that produce RBDs with the most beneficial N-glycan structures for different applications.
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  • 文章类型: Journal Article
    植物可以产生复杂的药物和技术蛋白质。蜘蛛丝蛋白是后者的一个例子,可以使用,例如,作为高性能纺织品或伤口敷料的化合物。如果与弹性蛋白样多肽(ELPs)基因融合,丝蛋白可以在〜30°C的中等温度下从澄清的植物提取物中可逆地沉淀,盐浓度>1.5M,这简化了纯化,从而降低了成本。然而,围绕这一机制开发的技术依赖于可溶性和聚集状态之间的重复循环来去除植物宿主细胞杂质,这增加了处理时间和缓冲消耗。此外,使用常规染色方法很难检测ELP,这阻碍了机组运行性能的分析和工艺开发。这里,我们首先开发了一种基于表面等离子体共振(SPR)光谱的方法来定量ELP融合蛋白。然后我们测试不同的过滤器以制备具有>50%回收的蜘蛛丝ELP融合蛋白的澄清的植物提取物。最后,我们建立了基于膜的纯化方法,其不需要在可溶性和聚集的ELP状态之间循环,但操作类似于超滤/渗滤装置。使用数据驱动的实验设计(DoE)方法来表征可逆ELP沉淀系统,我们发现孔径高达1.2µm,浓度为2-3M氯化钠的膜促进了接近100%的步骤回收率和纯度>90%。因此,该系统可用于纯化在植物和其他宿主中产生的ELP标记的蛋白质。
    Plants can produce complex pharmaceutical and technical proteins. Spider silk proteins are one example of the latter and can be used, for example, as compounds for high-performance textiles or wound dressings. If genetically fused to elastin-like polypeptides (ELPs), the silk proteins can be reversibly precipitated from clarified plant extracts at moderate temperatures of ~ 30 °C together with salt concentrations > 1.5 M, which simplifies purification and thus reduces costs. However, the technologies developed around this mechanism rely on a repeated cycling between soluble and aggregated state to remove plant host cell impurities, which increase process time and buffer consumption. Additionally, ELPs are difficult to detect using conventional staining methods, which hinders the analysis of unit operation performance and process development. Here, we have first developed a surface plasmon resonance (SPR) spectroscopy-based assay to quantity ELP fusion proteins. Then we tested different filters to prepare clarified plant extract with > 50% recovery of spider silk ELP fusion proteins. Finally, we established a membrane-based purification method that does not require cycling between soluble and aggregated ELP state but operates similar to an ultrafiltration/diafiltration device. Using a data-driven design of experiments (DoE) approach to characterize the system of reversible ELP precipitation we found that membranes with pore sizes up to 1.2 µm and concentrations of 2-3 M sodium chloride facilitate step a recovery close to 100% and purities of > 90%. The system can thus be useful for the purification of ELP-tagged proteins produced in plants and other hosts.
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  • 文章类型: Editorial
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  • 文章类型: Journal Article
    实现植物制备抗体的商业规模生产的主要困难是从植物提取物中纯化它们的复杂性和成本。这里,使用蛋白A磁珠,在一步程序中直接从未澄清的粗植物提取物中纯化两种单克隆抗体。此技术在资源方面提供了显着的节省,操作时间,和设备。
    A major difficulty to reach commercial- scale production for plant-made antibodies is the complexity and cost of their purification from plant extracts. Here, using Protein A magnetic beads, two monoclonal antibodies are purified in a one-step procedure directly from non-clarified crude plant extracts. This technique provides significant savings in terms of resources, operation time, and equipment.
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  • 文章类型: Journal Article
    植物越来越多地用于生产高质量的生物分子,用作工业中的药物和生物材料。植物已经证明它们可以产生拯救生命的治疗性蛋白质(Elelyso™-Gaucher疾病治疗,ZMapp™-抗埃博拉单克隆抗体,季节性流感疫苗,Covifenz™-SARS-CoV-2病毒样颗粒疫苗);然而,其中一些治疗性蛋白质很难推向市场,这给制造企业带来了严重困难。关闭了该行业的领先公司之一(加拿大生物技术公司MedicagoInc.,Covifenz的生产商)由于从母公司撤回投资导致了严重的问题:是什么阻碍了植物制造的生物制剂的开发以改善健康结果?探索植物作为生物工厂的巨大潜力,这篇综述提供了关于植物衍生生物制品(PDB)的最新观点。重点放在基于植物的表达系统的进步上,并强调简化基于复杂蛋白质的生物制品生产的尖端技术。植物衍生生物制品在不同领域的多功能性,如人类和动物健康,工业,农业,强调。这篇综述还仔细研究了植物衍生生物制品特有的监管考虑因素,与其他系统生产的生物制品相比,揭示了所面临的差异。
    Plants are increasingly used for the production of high-quality biological molecules for use as pharmaceuticals and biomaterials in industry. Plants have proved that they can produce life-saving therapeutic proteins (Elelyso™-Gaucher\'s disease treatment, ZMapp™-anti-Ebola monoclonal antibodies, seasonal flu vaccine, Covifenz™-SARS-CoV-2 virus-like particle vaccine); however, some of these therapeutic proteins are difficult to bring to market, which leads to serious difficulties for the manufacturing companies. The closure of one of the leading companies in the sector (the Canadian biotech company Medicago Inc., producer of Covifenz) as a result of the withdrawal of investments from the parent company has led to the serious question: What is hindering the exploitation of plant-made biologics to improve health outcomes? Exploring the vast potential of plants as biological factories, this review provides an updated perspective on plant-derived biologics (PDB). A key focus is placed on the advancements in plant-based expression systems and highlighting cutting-edge technologies that streamline the production of complex protein-based biologics. The versatility of plant-derived biologics across diverse fields, such as human and animal health, industry, and agriculture, is emphasized. This review also meticulously examines regulatory considerations specific to plant-derived biologics, shedding light on the disparities faced compared to biologics produced in other systems.
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  • 文章类型: Review
    在植物中生产流感疫苗是通过病毒血凝素(HA)的瞬时表达来实现的,由细菌载体根癌农杆菌介导的过程。然后通过植物细胞的分泌途径产生和成熟HA蛋白,在被运输到质膜之前,它们诱导病毒样颗粒(VLP)的形成。VLP的产生不可避免地影响植物细胞,RNA沉默的病毒抑制剂(VSR)共表达以增加重组蛋白的产量。然而,关于宿主对外源蛋白表达的分子反应的信息很少。这项工作全面概述了瞬时表达VSRP19或共表达P19和流感HA的本氏烟草叶细胞中发生的分子变化。我们的数据确定了对农杆菌介导的外源蛋白表达的一般反应,包括叶绿体基因表达的关闭,通过木质化激活氧化应激反应和增强植物细胞壁。我们的结果还表明,P19表达促进水杨酸(SA)信号,HA蛋白的共表达所抑制的过程。在降低P19水平的同时,HA表达也诱导特异性标记,对脂质代谢有影响,膜内的脂质分布和与羟脂素相关的信号传导。当生产VLP时,因此,抑制P19反应可能是由于VSR表达降低所致,SA和羟脂素通路之间的串扰,或两种结果的组合。与氧化应激反应的上调一致,我们最后表明,通过外源施用抗坏血酸减少氧化应激损伤可以提高VLP生产过程中的植物生物量质量。
    The production of influenza vaccines in plants is achieved through transient expression of viral hemagglutinins (HAs), a process mediated by the bacterial vector Agrobacterium tumefaciens. HA proteins are then produced and matured through the secretory pathway of plant cells, before being trafficked to the plasma membrane where they induce formation of virus-like particles (VLPs). Production of VLPs unavoidably impacts plant cells, as do viral suppressors of RNA silencing (VSRs) that are co-expressed to increase recombinant protein yields. However, little information is available on host molecular responses to foreign protein expression. This work provides a comprehensive overview of molecular changes occurring in Nicotiana benthamiana leaf cells transiently expressing the VSR P19, or co-expressing P19 and an influenza HA. Our data identifies general responses to Agrobacterium-mediated expression of foreign proteins, including shutdown of chloroplast gene expression, activation of oxidative stress responses and reinforcement of the plant cell wall through lignification. Our results also indicate that P19 expression promotes salicylic acid (SA) signalling, a process dampened by co-expression of the HA protein. While reducing P19 level, HA expression also induces specific signatures, with effects on lipid metabolism, lipid distribution within membranes and oxylipin-related signalling. When producing VLPs, dampening of P19 responses thus likely results from lower expression of the VSR, crosstalk between SA and oxylipin pathways, or a combination of both outcomes. Consistent with the upregulation of oxidative stress responses, we finally show that reduction of oxidative stress damage through exogenous application of ascorbic acid improves plant biomass quality during production of VLPs.
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