modular network

  • 文章类型: Journal Article
    背景:恐慌症(PD)是一种常见的致残疾病,其特征是反复发作的惊恐发作。情绪和行为障碍与功能连接(FC)和网络异常有关。我们用了整个大脑FC,模块化网络,和图论分析研究PD中广泛的网络概况。
    方法:纳入82个PD和97个对照的功能MRI数据。每对160个区域之间的本征FC,6个内部网络,并对15个网络间进行了分析。探索了拓扑性质。
    结果:PD患者显示右侧脑岛内的FCs改变,额叶皮质-后扣带皮质(PCC)之间,额叶皮质-小脑,和PCC-枕骨皮质(校正后的P值<0.001)。在感觉运动网络(SMN)和SMN-枕骨网络(OCN)内检测到较低的连接(P值<0.05)。在PD中发现了各种减少的全局和局部网络特征(P值<0.05)。此外,脑岛的PD症状与结节效率(Ne)之间存在显着相关性(r=-0.273,P=0.016),和岛内FC(r=-0.226,P=0.041)。
    结论:PD患者存在功能异常的脑网络,特别是脑岛内的FC和Ne减少,提示信息整合功能障碍在PD中起重要作用。
    BACKGROUND: Panic disorder (PD) is a common disabling condition characterized by recurrent panic attacks. Emotional and behavioral impairments are associated with functional connectivity (FC) and network abnormalities. We used the whole brain FC, modular networks, and graph-theory analysis to investigate extensive network profiles in PD.
    METHODS: The functional MRI data from 82 PD and 97 controls were included. Intrinsic FC between each pair of 160 regions, 6 intra-networks, and 15 inter-networks were analyzed. The topological properties were explored.
    RESULTS: PD patients showed altered FCs within the right insula, between frontal cortex-posterior cingulate cortex (PCC), frontal cortex-cerebellum, and PCC-occipital cortex (corrected P values < 0.001). Lower connections within the Sensorimotor Network (SMN) and SMN-Occipital Network (OCN) were detected (P values < 0.05). Various decreased global and local network features were found in PD (P values < 0.05). In addition, significant correlations were found between PD symptoms and nodal efficiency (Ne) in the insula (r = -0.273, P = 0.016), and the FC of the intra-insula (r = -0.226, P = 0.041).
    CONCLUSIONS: PD patients present with abnormal functional brain networks, especially the decreased FC and Ne within insula, suggesting that dysfunction of information integration plays an important role in PD.
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  • 文章类型: Journal Article
    目的:认知缺陷在颞叶癫痫(TLE)患者中很常见。这里,我们旨在研究与TLE患者不同认知状态相关的功能网络的模块化架构,以及丘脑在模块化网络中的作用.
    方法:对53例TLE患者和37例匹配的健康对照者进行静息状态功能磁共振成像扫描。所有患者均接受蒙特利尔认知评估测验,并据此分为认知正常的TLE患者(TLE-CN,n=35)和TLE患者认知障碍(TLE-CI,n=18)组。计算和比较了功能网络的模块化特性,包括全局模块化Q,模块化偏析指数,结膜内连接,和模块间连接。在分析每个丘脑细分的模块化属性(参与系数和模块内度z得分)以评估丘脑对模块化功能网络的贡献之前,通过应用“赢家通吃”策略来生成与模块化网络相对应的丘脑细分。然后进一步探讨了网络属性与认知表现之间的关系。
    结果:TLE-CN和TLE-CI患者均显示出较低的整体模块化,以及腹侧注意力网络和默认模式网络的较低模块化隔离指数值。然而,不同的认知状态存在不同的模内和模间连接模式。此外,TLE-CN和TLE-CI患者均表现出功能性丘脑细分的异常模块化特性,TLE-CI患者表现出更广泛的异常。TLE-CI患者的认知表现与功能网络的模块化特性无关,而与功能性丘脑细分的模块化特性无关。
    结论:丘脑在模块化网络中起着重要作用,并可能代表TLE认知损害的关键神经机制。
    Cognitive deficit is common in patients with temporal lobe epilepsy (TLE). Here, we aimed to investigate the modular architecture of functional networks associated with distinct cognitive states in TLE patients together with the role of the thalamus in modular networks.
    Resting-state functional magnetic resonance imaging scans were acquired from 53 TLE patients and 37 matched healthy controls. All patients received the Montreal Cognitive Assessment test and accordingly were divided into TLE patients with normal cognition (TLE-CN, n = 35) and TLE patients with cognitive impairment (TLE-CI, n = 18) groups. The modular properties of functional networks were calculated and compared including global modularity Q, modular segregation index, intramodular connections, and intermodular connections. Thalamic subdivisions corresponding to the modular networks were generated by applying a \'winner-take-all\' strategy before analyzing the modular properties (participation coefficient and within-module degree z-score) of each thalamic subdivision to assess the contribution of the thalamus to modular functional networks. Relationships between network properties and cognitive performance were then further explored.
    Both TLE-CN and TLE-CI patients showed lower global modularity, as well as lower modular segregation index values for the ventral attention network and the default mode network. However, different patterns of intramodular and intermodular connections existed for different cognitive states. In addition, both TLE-CN and TLE-CI patients exhibited anomalous modular properties of functional thalamic subdivisions, with TLE-CI patients presenting a broader range of abnormalities. Cognitive performance in TLE-CI patients was not related to the modular properties of functional network but rather to the modular properties of functional thalamic subdivisions.
    The thalamus plays a prominent role in modular networks and potentially represents a key neural mechanism underlying cognitive impairment in TLE.
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  • 文章类型: Journal Article
    基于网络的模型很容易理解流行病的动态,因为它们具有内在的能力来模拟现代人类连通性强烈的世界中相互作用的异质性。我们提出了一个框架来创建一个线框,该线框通过将人口统计信息与人口联系在一起来模仿地理中人口的社交联系网络。该框架导致具有小世界拓扑结构的模块化网络,可适应密度变化并模拟家庭中的人类互动,社会,和工作空间。当加载合适的经济时,社会,和城市数据塑造人类联系的模式,该网络成为城市规划者的有效决策工具,人口学家,和社会科学家。我们采用合成网络在受控环境中进行实验,并研究分区的影响,密度变化,以及使用SEIR模型的变体对流行病变量的人口流动性。我们的结果表明,这些人口统计学因素对社会接触模式有特征性的影响,表现为独特的流行病动态。随后,我们通过使用现有的人口普查数据创建相应的代理社交联系网络,为印度三个州提供了一项真实世界的COVID-19案例研究。案例研究验证了人口统计的模块化联系网络减少了流行病变量估计的误差。
    Network-based models are apt for understanding epidemic dynamics due to their inherent ability to model the heterogeneity of interactions in the contemporary world of intense human connectivity. We propose a framework to create a wire-frame that mimics the social contact network of the population in a geography by lacing it with demographic information. The framework results in a modular network with small-world topology that accommodates density variations and emulates human interactions in family, social, and work spaces. When loaded with suitable economic, social, and urban data shaping patterns of human connectance, the network emerges as a potent decision-making instrument for urban planners, demographers, and social scientists. We employ synthetic networks to experiment in a controlled environment and study the impact of zoning, density variations, and population mobility on the epidemic variables using a variant of the SEIR model. Our results reveal that these demographic factors have a characteristic influence on social contact patterns, manifesting as distinct epidemic dynamics. Subsequently, we present a real-world COVID-19 case study for three Indian states by creating corresponding surrogate social contact networks using available census data. The case study validates that the demography-laced modular contact network reduces errors in the estimates of epidemic variables.
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  • 文章类型: Journal Article
    大脑网络具有显著的成本效益,而其网络结构和活动的经济优化背后的基本物理和动态机制尚未确定。在这项研究中,我们研究了生物学上合理的空间模块化神经元网络模型中结构和动力学之间复杂的成本效益相互作用。我们观察到,在具有较低布线成本的模块化网络拓扑下,来自激发-抑制平衡的关键雪崩状态也可以实现较低的点火成本,但对刺激的响应灵敏度大大提高。我们通过一种新颖的近似理论推导了控制宏观网络动力学的平均场方程。以临界雪崩形式的低点火成本和更强响应的机制被解释为在增加模块的连接密度时接近模块的Hopf分叉。我们的工作揭示了在神经系统中广泛观察到的具有成本效益的模块化组织和关键动态的通用机制,提供对大脑启发的高效计算设计的见解。
    The brain network is notably cost-efficient, while the fundamental physical and dynamic mechanisms underlying its economical optimization in network structure and activity have not been determined. In this study, we investigate the intricate cost-efficient interplay between structure and dynamics in biologically plausible spatial modular neuronal network models. We observe that critical avalanche states from excitation-inhibition balance under modular network topology with less wiring cost can also achieve lower costs in firing but with strongly enhanced response sensitivity to stimuli. We derive mean-field equations that govern the macroscopic network dynamics through a novel approximate theory. The mechanism of low firing cost and stronger response in the form of critical avalanches is explained as a proximity to a Hopf bifurcation of the modules when increasing their connection density. Our work reveals the generic mechanism underlying the cost-efficient modular organization and critical dynamics widely observed in neural systems, providing insights into brain-inspired efficient computational designs.
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  • 文章类型: Journal Article
    The aim of this study was to investigate the abnormities in functional connectivity (FC) within each modular network and between modular networks in patients with systemic lupus erythematosus (SLE). Twelve meaningful modular networks were identified via independent component analysis from 41 patients and 40 volunteers. Parametric tests were used to compare the intra- and intermodular FC between the groups. Partial correlation analysis was used to seek the relationships between abnormal FCs and the clinical data. Compared to the controls, SLE patients showed decreased intramodular FC in the anterior default mode network (aDMN), posterior default mode network (pDMN), ventral attention network (VAN), and sensorimotor network (SMN) and increased intramodular FC in the medial visual network (mVN) and left frontoparietal network. In addition, SLE patients showed decreased intermodular FC between the SMN and the lateral visual network (lVN), between the SMN and the VAN, and between the pDMN and the lVN and exhibited increased intermodular FC between the SMN and the salience network (SAN), between the pDMN and the SAN, and between the aDMN and the VAN. Moreover, we found several correlations among the abnormal FCs and the Mini-Mental State Examination in SLE patients. Mild cognitive impairment is compensated by the hyperconnectivity between the aDMN and the VAN, while severe cognitive impairment tends to be compensated by the hyperconnectivity between the SMN and the SAN. The FC value between the SMN and the SAN and between the aDMN and the VAN may serve as neuroimaging markers for monitoring cognitive progression in SLE patients.
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  • 文章类型: Journal Article
    传染病的直接传播需要社会交往。因此,人群的社会网络结构对传染病动态的形成起着关键的作用。一项巨大的研究工作已经研究了特定的社交网络结构如何使人群更(或更少)容易受到破坏性流行病的影响。然而,同样重要的是,了解社交网络如何促进地方病的动态,其中病原体长时间维持在稳定水平。可以维持地方病的宿主可以作为生态社区内多宿主病原体的基石宿主。也有更大的潜力作为农业和人畜共患疾病的关键野生动植物水库。这里,我们研究了可以在宿主中促进地方病的社会和人口过程的组合。我们综合了理论和实证工作,以证明社会结构和社会动态在维持地方病中的重要性。我们还强调了区分局部和全球持续感染的重要性,并揭示了不同的社会过程如何驱动传染病出现地方病的规模变化。我们的综合提供了一个框架,通过该框架可以了解社会性如何有助于野生动物宿主中传染病的长期维持,并提供了一套工具来解开任何给定宿主病原体系统中涉及的社会和人口统计学机制。
    背景:在线版本包含补充材料,可在10.1007/s00265-021-03055-8获得。
    Social interactions are required for the direct transmission of infectious diseases. Consequently, the social network structure of populations plays a key role in shaping infectious disease dynamics. A huge research effort has examined how specific social network structures make populations more (or less) vulnerable to damaging epidemics. However, it can be just as important to understand how social networks can contribute to endemic disease dynamics, in which pathogens are maintained at stable levels for prolonged periods of time. Hosts that can maintain endemic disease may serve as keystone hosts for multi-host pathogens within an ecological community, and also have greater potential to act as key wildlife reservoirs of agricultural and zoonotic diseases. Here, we examine combinations of social and demographic processes that can foster endemic disease in hosts. We synthesise theoretical and empirical work to demonstrate the importance of both social structure and social dynamics in maintaining endemic disease. We also highlight the importance of distinguishing between the local and global persistence of infection and reveal how different social processes drive variation in the scale at which infectious diseases appear endemic. Our synthesis provides a framework by which to understand how sociality contributes to the long-term maintenance of infectious disease in wildlife hosts and provides a set of tools to unpick the social and demographic mechanisms involved in any given host-pathogen system.
    BACKGROUND: The online version contains supplementary material available at 10.1007/s00265-021-03055-8.
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  • 文章类型: Journal Article
    Chirping male crickets combine a 30 Hz pulse pattern with a 3 Hz chirp pattern to drive the rhythmic opening-closing movements of the front wings for sound production. Lesion experiments suggest two coupled modular timer-networks located along the chain of abdominal ganglia, a network in A3 and A4 generating the pulse pattern, and a network organized along with ganglia A4-A6 controlling the generation of the chirp rhythm. We analyzed neurons of the timer-networks and their synaptic connections by intracellular recordings and staining. We identified neurons spiking in phase with the chirps and pulses, or that are inhibited during the chirps. Neurons share a similar \"gestalt\", regarding the position of the cell body, the dendritic arborizations and the contralateral ascending axon. Activating neurons of the pulse-timer network elicits ongoing motor activity driving the generation of pulses; this activity is not structured in the chirp pattern. Activating neurons of the chirp-timer network excites pulse-timer neurons; it drives the generation of chirps and during the chirps the pulse pattern is produced. Our results support the hypothesis that two modular networks along the abdominal ganglion chain control the cricket calling song, a pattern generating network in the mesothoracic ganglion may not be required.
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  • 文章类型: Journal Article
    A functional role of the cerebral cortex is to form and hold representations of the sensory world for behavioral purposes. This is achieved by a sheet of neurons, organized in modules called cortical columns, that receives inputs in a peculiar manner, with only a few neurons driven by sensory inputs through thalamic projections, and a vast majority of neurons receiving mainly cortical inputs. How should cortical modules be organized, with respect to sensory inputs, in order for the cortex to efficiently hold sensory representations in memory? To address this question we investigate the memory performance of trees of recurrent networks (TRN) that are composed of recurrent networks, modeling cortical columns, connected with each others through a tree-shaped feed-forward backbone of connections, with sensory stimuli injected at the root of the tree. On these sensory architectures two types of short-term memory (STM) mechanisms can be implemented, STM via transient dynamics on the feed-forward tree, and STM via reverberating activity on the recurrent connectivity inside modules. We derive equations describing the dynamics of such networks, which allow us to thoroughly explore the space of possible architectures and quantify their memory performance. By varying the divergence ratio of the tree, we show that serial architectures, where sensory inputs are successively processed in different modules, are better suited to implement STM via transient dynamics, while parallel architectures, where sensory inputs are simultaneously processed by all modules, are better suited to implement STM via reverberating dynamics.
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  • 文章类型: Journal Article
    大脑使用分布式和模块化组织的混合来执行计算并生成适当的动作。虽然大脑使用模块化系统进行计算的原理更适合建模,大脑可能使用分布式原则做出选择的原则尚未被探索。从这个角度来看,我们的目标是使用神经网络方法描绘其中一些分布式原理,并将其结果用作透镜,通过该透镜重新考虑一些先前发布的神经生理学数据。为了与我们自己的数据进行直接比较,我们训练神经网络来执行二元风险选择。我们发现价值相关性无处不在,并且总是伴随着非价值信息,包括空间信息(即,没有纯值信号)。评价,比较,和选择不是不同的过程;事实上,即使在最早的阶段,价值信号也是直接贡献的,尽管很弱,到动作选择。没有地方,除了在行动选择层面,在这些维度上完全整合。没有专门提供特定报价的单位;相反,所有单位都以反相关格式对两个报价的值进行编码,从而有助于比较。各个网络层对应于从输入到输出空间的连续旋转中的阶段,而不是功能上不同的模块。虽然我们的网络可能不是大脑过程的直接反映,我们建议这些原则应作为假设进行检验和评估,以供将来的研究使用。
    The brain uses a mixture of distributed and modular organization to perform computations and generate appropriate actions. While the principles under which the brain might perform computations using modular systems have been more amenable to modeling, the principles by which the brain might make choices using distributed principles have not been explored. Our goal in this perspective is to delineate some of those distributed principles using a neural network method and use its results as a lens through which to reconsider some previously published neurophysiological data. To allow for direct comparison with our own data, we trained the neural network to perform binary risky choices. We find that value correlates are ubiquitous and are always accompanied by non-value information, including spatial information (i.e., no pure value signals). Evaluation, comparison, and selection were not distinct processes; indeed, value signals even in the earliest stages contributed directly, albeit weakly, to action selection. There was no place, other than at the level of action selection, at which dimensions were fully integrated. No units were specialized for specific offers; rather, all units encoded the values of both offers in an anti-correlated format, thus contributing to comparison. Individual network layers corresponded to stages in a continuous rotation from input to output space rather than to functionally distinct modules. While our network is likely to not be a direct reflection of brain processes, we propose that these principles should serve as hypotheses to be tested and evaluated for future studies.
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  • 文章类型: Journal Article
    We study the memory performance of a class of modular attractor neural networks, where modules are potentially fully-connected networks connected to each other via diluted long-range connections. On this anatomical architecture we store memory patterns of activity using a Willshaw-type learning rule. P patterns are split in categories, such that patterns of the same category activate the same set of modules. We first compute the maximal storage capacity of these networks. We then investigate their error-correction properties through an exhaustive exploration of parameter space, and identify regions where the networks behave as an associative memory device. The crucial parameters that control the retrieval abilities of the network are (1) the ratio between the number of synaptic contacts of long- and short-range origins (2) the number of categories in which a module is activated and (3) the amount of local inhibition. We discuss the relationship between our model and networks of cortical patches that have been observed in different cortical areas.
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