graph measure

  • 文章类型: Journal Article
    Connectome了解人类大脑的结构和功能连接的复杂组织对于获得认知过程和障碍的见解至关重要。
    为了提高脑部疾病的预测准确性,本研究调查了与精神分裂症相关的连接不良子网络和图结构。
    通过使用提出的结构连通性-深层图神经网络(sc-DGNN)模型,并与机器学习(ML)和深度学习(DL)模型进行比较。这项工作试图集中在88个受试者的扩散磁共振成像(dMRI),三个经典ML,和五个DL模型。
    提出了结构连通性深度图神经网络(sc-DGNN)模型,以有效地预测与精神分裂症相关的连通性异常,并且与传统的ML和DL(GNN)方法相比,在准确性方面表现出卓越的性能,灵敏度,特异性,精度,F1分数,和接收机工作特性下面积(AUC)。
    使用结构连接矩阵和实验结果表明,线性判别分析(LDA)在ML模型中的准确率为72%,sc-DGNN在DL模型中以93%的准确率进行区分精神分裂症和健康患者。
    UNASSIGNED: Connectome is understanding the complex organization of the human brain\'s structural and functional connectivity is essential for gaining insights into cognitive processes and disorders.
    UNASSIGNED: To improve the prediction accuracy of brain disorder issues, the current study investigates dysconnected subnetworks and graph structures associated with schizophrenia.
    UNASSIGNED: By using the proposed structural connectivity-deep graph neural network (sc-DGNN) model and compared with machine learning (ML) and deep learning (DL) models.This work attempts to focus on eighty-eight subjects of diffusion magnetic resonance imaging (dMRI), three classical ML, and five DL models.
    UNASSIGNED: The structural connectivity-deep graph neural network (sc-DGNN) model is proposed to effectively predict dysconnectedness associated with schizophrenia and exhibits superior performance compared to traditional ML and DL (GNNs) methods in terms of accuracy, sensitivity, specificity, precision, F1-score, and Area under receiver operating characteristic (AUC).
    UNASSIGNED: The classification task on schizophrenia using structural connectivity matrices and experimental results showed that linear discriminant analysis (LDA) performed 72% accuracy rate in ML models and sc-DGNN performed at a 93% accuracy rate in DL models to distinguish between schizophrenia and healthy patients.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • DOI:
    文章类型: Preprint
    来自扩散MRI(dMRI)的连接性矩阵提供了一种可解释和可概括的理解人脑连接体的方法。然而,dMRI遭受站点间和扫描仪间的变化,这阻碍了跨数据集的分析,以提高结果的稳健性和可重复性。为了评估连通性矩阵的不同协调方法,我们比较了在应用三种协调技术之前和之后从这些矩阵导出的图形度量:均值偏移,ComBat,还有CycleGan.样本包括168个年龄匹配的,来自两项研究的性别匹配的正常受试者:范德比尔特记忆与衰老计划(VMAP)和正常人认知下降的生物标志物(BIOCARD)。首先,我们绘制了图形度量,并使用变异系数(CoV)和Mann-WhitneyU检验来评估不同方法在消除矩阵和派生图形度量上的位点效应方面的有效性。ComBat有效地消除了全局效率和模块化的站点效应,并优于其他两种方法。然而,当协调平均介数中心性时,所有方法都表现出较差的性能。第二,我们测试了我们的协调方法是否保留了年龄和图形测量之间的相关性。除CycleGAN外,所有方法都在一个方向上改善了年龄与全局效率之间以及年龄与模块化之间的相关性,从不显著到显著,p值小于0.05。
    Connectivity matrices derived from diffusion MRI (dMRI) provide an interpretable and generalizable way of understanding the human brain connectome. However, dMRI suffers from inter-site and between-scanner variation, which impedes analysis across datasets to improve robustness and reproducibility of results. To evaluate different harmonization approaches on connectivity matrices, we compared graph measures derived from these matrices before and after applying three harmonization techniques: mean shift, ComBat, and CycleGAN. The sample comprises 168 age-matched, sex-matched normal subjects from two studies: the Vanderbilt Memory and Aging Project (VMAP) and the Biomarkers of Cognitive Decline Among Normal Individuals (BIOCARD). First, we plotted the graph measures and used coefficient of variation (CoV) and the Mann-Whitney U test to evaluate different methods\' effectiveness in removing site effects on the matrices and the derived graph measures. ComBat effectively eliminated site effects for global efficiency and modularity and outperformed the other two methods. However, all methods exhibited poor performance when harmonizing average betweenness centrality. Second, we tested whether our harmonization methods preserved correlations between age and graph measures. All methods except for CycleGAN in one direction improved correlations between age and global efficiency and between age and modularity from insignificant to significant with p-values less than 0.05.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    遭受自然灾害的儿童容易患上创伤后应激障碍(PTSD)。先前使用静息状态功能神经成像的研究揭示了儿科PTSD患者相对于健康对照(HC)的基于图形的脑拓扑网络指标的变化。在这里,我们旨在将深度学习(DL)模型应用于分类的神经影像学标记,这可能有助于诊断小儿PTSD。
    我们研究了33例小儿PTSD和53例匹配的HC。使用部分相关系数建立了自动解剖标记图谱中90个大脑区域之间的功能连接,通过将阈值应用于所得的90*90偏相关矩阵来构建全脑功能连接体。图论分析用于检查功能性连接体的拓扑特性。然后,DL算法使用此方法对小儿PTSD与HC进行分类。
    使用DL的图形拓扑测量提供了用于区分儿科PTSD和HC的潜在临床有用的分类器(总体准确度71.2%)。边境区域(中央执行网络),扣带皮质,杏仁核对DL模型的性能贡献最大。
    基于fMRI数据的图形拓扑测量可能有助于区分儿科PTSD和HC的临床应用成像模型。DL模型可能是识别PTSD参与者的脑机制的有用工具。
    Children exposed to natural disasters are vulnerable to developing posttraumatic stress disorder (PTSD). Previous studies using resting-state functional neuroimaging have revealed alterations in graph-based brain topological network metrics in pediatric PTSD patients relative to healthy controls (HC). Here we aimed to apply deep learning (DL) models to neuroimaging markers of classification which may be of assistance in diagnosis of pediatric PTSD.
    We studied 33 pediatric PTSD and 53 matched HC. Functional connectivity between 90 brain regions from the automated anatomical labeling atlas was established using partial correlation coefficients, and the whole-brain functional connectome was constructed by applying a threshold to the resultant 90 * 90 partial correlation matrix. Graph theory analysis was used to examine the topological properties of the functional connectome. A DL algorithm then used this measure to classify pediatric PTSD vs HC.
    Graphic topological measures using DL provide a potentially clinically useful classifier for differentiating pediatric PTSD and HC (overall accuracy 71.2%). Frontoparietal areas (central executive network), cingulate cortex, and amygdala contributed the most to the DL model\'s performance.
    Graphic topological measures based on fMRI data could contribute to imaging models of clinical utility in distinguishing pediatric PTSD from HC. DL model may be a useful tool in the identification of brain mechanisms PTSD participants.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

公众号