fossil

化石
  • 文章类型: Journal Article
    体型对我们了解灭绝的生物至关重要。生理学,生态和生活史都受到身体大小和形状的强烈影响,最终决定一个物种如何与环境相互作用。在灭绝的动物中重建身体大小和形态,可以深入了解过去生态系统中群落组成和动物群周转的动态以及广泛的宏观进化趋势。许多灭绝的动物只能从不完整的遗骸中得知,需要使用解剖代理来重建身体的大小和形式。影响这些代理适当性的许多限制经常被忽视,在重建代表关键输入数据的研究中导致争议和下游不准确。从这个角度来看,我们讨论了四个突出的案例研究(Dunkleosteus,直升机,Megalodon和Perucetus),其中代理类群已用于从零碎的遗骸中估计体型和形状。我们综合了这些和其他研究的结果,以讨论在重建灭绝的生物时影响分类单元选择有效性的细微差别,以及可以确保选择最合适的代理的缓解措施。我们认为,这些预防措施对于最大程度地提高灭绝类群中重建的鲁棒性是必要的,以获得更好的进化和生态推论。
    Body size is of fundamental importance to our understanding of extinct organisms. Physiology, ecology and life history are all strongly influenced by body size and shape, which ultimately determine how a species interacts with its environment. Reconstruction of body size and form in extinct animals provides insight into the dynamics underlying community composition and faunal turnover in past ecosystems and broad macroevolutionary trends. Many extinct animals are known only from incomplete remains, necessitating the use of anatomical proxies to reconstruct body size and form. Numerous limitations affecting the appropriateness of these proxies are often overlooked, leading to controversy and downstream inaccuracies in studies for which reconstructions represent key input data. In this perspective, we discuss four prominent case studies (Dunkleosteus, Helicoprion, Megalodon and Perucetus) in which proxy taxa have been used to estimate body size and shape from fragmentary remains. We synthesise the results of these and other studies to discuss nuances affecting the validity of taxon selection when reconstructing extinct organisms, as well as mitigation measures that can ensure the selection of the most appropriate proxy. We argue that these precautionary measures are necessary to maximise the robustness of reconstructions in extinct taxa for better evolutionary and ecological inferences.
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  • 文章类型: Journal Article
    大规模灭绝对现代生物群的系统发育结构以及我们重建广泛的进化史模式的能力都有重大影响。最近的大规模灭绝也是最著名的,它暗示了在定义白垩纪/古近纪边界(K/Pg)时的栓塞影响。尽管这一事件的生物效应受到了严格的审查,某些具有生态重要性和多样性的群体仍然被严重低估。其中一组是淡水射线鳍鱼(Actinopterygii)。这些鱼类占现代脊椎动物多样性的25%,然而,它们的K/Pg化石记录的孤立和零碎性质限制了我们对整个事件中它们的多样性动态的理解。这里,我们使用基于分子的系统发育的多样化分析以及从北美西部丹佛盆地的独特地点回收的化石的形态分析来解决这个问题,该分析提供了前所未有的K/Pg分辨率。我们的结果揭示了以前无法识别的淡水进化枝K/Pg后多样化的信号,并表明这种变化是由局部和零星的灭绝模式驱动的。关于K/Pg事件对淡水鱼的影响的推论也使我们对淡水动物群如何从当前的生物多样性危机中恢复过来的期望得到了启发。
    Mass extinctions are major influences on both the phylogenetic structure of the modern biota and our ability to reconstruct broad-based patterns of evolutionary history. The most recent mass extinction is also the most famous-that which implicates a bolide impact in defining the Cretaceous/Palaeogene boundary (K/Pg). Although the biotic effects of this event receive intensive scrutiny, certain ecologically important and diverse groups remain woefully understudied. One such group is the freshwater ray-finned fishes (Actinopterygii). These fish represent 25% of modern vertebrate diversity, yet the isolated and fragmentary nature of their K/Pg fossil record limits our understanding of their diversity dynamics across this event. Here, we address this problem using diversification analysis of molecular-based phylogenies alongside a morphotype analysis of fossils recovered from a unique site in the Denver Basin of western North America that provides unprecedented K/Pg resolution. Our results reveal previously unrecognized signals of post-K/Pg diversification in freshwater clades and suggest that the change was driven by localized and sporadic patterns of extinction. Supported inferences regarding the effects of the K/Pg event on freshwater fish also inform our expectations of how freshwater faunas might recover from the current biodiversity crisis.
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  • 文章类型: Journal Article
    目的:新生代麦格理港组(MHF)是澳大利亚最古老,最南端的后白垩纪植物化石组合之一。恰逢始新世早期气候最佳(EECO),并早于澳大利亚从南极洲分裂,它提供了关键数据来研究南极森林生物群落的多样性和范围,以及冈瓦纳分手导致的澳大利亚和南美之间的植物区系差异。
    方法:描述并系统分析了来自MHF的新化石植物压缩的微观形态和宏观形态。对以前出版的非开花植物记录进行了审查和修订。提供了大化石丰度数据。将植物区系与南半球其他早期古近纪组合进行了比较。
    结果:从大化石记录中鉴定出12种非开花植物。针叶树包括南洋菜科(南洋菜,A.readiae,A.timkarikensissp.11月。,和线性南洋菜),罗汉科(Acmopyleglabra,mucronatus,副罗汉松。11月。,和后叶。),和柏树科(Libocedrusmicroformis)。Dacryparpuslinifolius被指定为D.mucronatus的初级同义词。其他组件包括苏铁(Boweniajohnsonii,Zamiaceae),蕨类植物(Comlopteriscenozoicus,Umkomasiaceae),和一种蕨类植物(金麦草,五子花科)。
    结论:化石组合代表了一个混合的近极地森林,针叶树具有高度多样性。几种物种的形态和保存表明对高纬度生活的适应。大叶和小叶针叶树的共存意味着复杂的,可能是开放的森林结构。与阿根廷同期组合的比较支持EECO期间的环极生物群落,从澳大利亚南部穿过南极洲到达南美洲南部。
    OBJECTIVE: The Cenozoic Macquarie Harbour Formation (MHF) hosts one of the oldest and southernmost post-Cretaceous fossil plant assemblages in Australia. Coinciding with the Early Eocene Climatic Optimum (EECO) and predating the breakup of Australia from Antarctica, it offers critical data to study the diversity and extent of the Austral Polar Forest Biome, and the floristic divergence between Australasia and South America resulting from the Gondwana breakup.
    METHODS: The micromorphology and macromorphology of new fossil plant compressions from the MHF were described and systematically analyzed. Previously published non-flowering plant records were reviewed and revised. Macrofossil abundance data were provided. The flora was compared with other early Paleogene assemblages from across the Southern Hemisphere.
    RESULTS: Twelve species of non-flowering plants were identified from the macrofossil record. Conifers include Araucariaceae (Araucaria macrophylla, A. readiae, A. timkarikensis sp. nov., and Araucarioides linearis), Podocarpaceae (Acmopyle glabra, Dacrycarpus mucronatus, Podocarpus paralungatikensis sp. nov., and Retrophyllum sp.), and Cupressaceae (Libocedrus microformis). Dacrycarpus linifolius was designated a junior synonym of D. mucronatus. Further components include a cycad (Bowenia johnsonii, Zamiaceae), a pteridosperm (Komlopteris cenozoicus, Umkomasiaceae), and a fern (Lygodium dinmorphyllum, Schizaeaceae).
    CONCLUSIONS: The fossil assemblage represents a mixed near-polar forest with a high diversity of conifers. The morphology and preservation of several species indicate adaptations to life at high latitudes. The coexistence of large- and small-leaved conifers implies complex, possibly open forest structures. Comparisons with contemporaneous assemblages from Argentina support a circumpolar biome during the EECO, reaching from southern Australia across Antarctica to southern South America.
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  • 文章类型: Journal Article
    Perlidae是Plecoptera中最多样化的家族,有证据表明可能适应更温暖的水生环境。据推测,气管g在此辐射过程中发挥了关键作用。这项研究介绍了一种化石化的stonoply幼虫的描述,在缅甸北部的中白垩纪克钦琥珀中保存为新鲜的exvia。根据独特的形态特征,将幼虫归类为Perlidae家族,包括齿状的拉西尼亚和尖头的下颌骨,细长的触感,词汇表短于圆形词汇表,胸段的侧面和腹面高度分支的g。此外,横向的存在,稀疏,枕骨上的不规则固定行进一步表明了亚科的分类。值得注意的是,化石幼虫在g的形态和分布上与Perlidae中的某些现存成员具有惊人的相似性,表明这些g结构在各种水生栖息地中具有优势。
    Perlidae stands as the most diverse family within Plecoptera, with evidence suggesting possible adaptation to warmer aquatic environments. Tracheal gills are hypothesized to have played a pivotal role in this radiation process. This study presents the description of a fossilized stonefly larva with gills, preserved as a fresh exuvia in mid-Cretaceous Kachin amber from northern Myanmar. The larva was classified within the family Perlidae based on distinctive morphological traits, including toothed lacinia and sharp-cusped mandibles, slender palps, glossae shorter than rounded paraglossae, and highly branched gills on the sides and ventral surface of thoracic segments. Additionally, the presence of a transverse, sparse, and irregular setal row on the occiput further indicates classification within the subfamily Acroneuriinae. Notably, the fossilized larva displays striking similarities in gill morphology and distribution to certain extant members within Perlidae, suggesting that these gill structures have an advantage in various aquatic habitats.
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  • 文章类型: Journal Article
    解决早期羊膜的系统发育关系,尤其是茎爬行动物,仍然是一个难题。保存完好的茎爬行动物标本的三维形态分析可以揭示重要的解剖数据并阐明系统发育区域。这里,我们提出了不寻常的早期二叠纪茎爬行动物Bolosaurusmajor的第一个彻底描述,包括对bolosaurid脑壳的第一个全面描述。我们描述了先前模糊的腭细节,允许深入了解牛龙喂养机制。讲台的各个方面,腭,下颌骨,和神经头颅表明B.major咬伤特别强烈。我们还发现B.major有一个令人惊讶的细长骨,类似于中二叠纪茎爬行动物Macroletterpoezicus,与其他古生代羊膜相比,这可能表明听力能力增强(例如,captorhinids).我们将新的解剖信息整合到一个大的系统发育矩阵中(150个OTU,590性状),以探讨茎爬行动物之间的Bolosauridae关系。我们的分析通常发现了一种近亲性的“Pararepilia”,\“并发现Bolosauridae在CaptorinidaeAraeoscelidia之后发散。我们还将B.major包含在一个较小的矩阵中(10个OTU,27个字符)旨在探索Bolosauridae的相互关系,并发现Bolosaurus的所有物种都是单系的。虽然爬行动物的关系仍需要进一步调查,我们的系统发育表明,在古生代茎爬行动物中,阻抗匹配耳的重复进化。
    Resolving the phylogenetic relationships of early amniotes, in particular stem reptiles, remains a difficult problem. Three-dimensional morphological analysis of well-preserved stem-reptile specimens can reveal important anatomical data and clarify regions of phylogeny. Here, we present the first thorough description of the unusual early Permian stem reptile Bolosaurus major, including the first comprehensive description of a bolosaurid braincase. We describe previously obscured details of the palate, allowing for insight into bolosaurid feeding mechanics. Aspects of the rostrum, palate, mandible, and neurocranium suggest that B. major had a particularly strong bite. We additionally found B. major has a surprisingly slender stapes, similar to that of the middle Permian stem reptile Macroleter poezicus, which may suggest enhanced hearing abilities compared to other Paleozoic amniotes (e.g., captorhinids). We incorporated our new anatomical information into a large phylogenetic matrix (150 OTUs, 590 characters) to explore the relationship of Bolosauridae among stem reptiles. Our analyses generally recovered a paraphyletic \"Parareptilia,\" and found Bolosauridae to diverge after Captorhinidae + Araeoscelidia. We also included B. major within a smaller matrix (10 OTUs, 27 characters) designed to explore the interrelationships of Bolosauridae and found all species of Bolosaurus to be monophyletic. While reptile relationships still require further investigation, our phylogeny suggests repeated evolution of impedance-matching ears in Paleozoic stem reptiles.
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  • 文章类型: Journal Article
    古代DNA的分析通常涉及对存活的短寡核苷酸进行测序,并与相关的基因组装配进行比对,现代物种这里,我们报告说,在52,000年前死亡的雌性羊毛猛犸象的皮肤保留了其古老的基因组结构。我们使用PaleoHi-C绘制染色质接触图并组装其基因组,产生28个染色体长度的支架。染色体区域,隔室,循环,巴尔的尸体,和不活跃的X染色体(Xi)超域持续存在。猛犸象皮肤中活跃和不活跃的基因组区室比其他大象组织更像亚洲象皮肤。我们的分析揭示了新的生物学。区室化的差异揭示了猛犸象与猛犸象的转录可能发生改变的基因。大象。MammothXi有一个传统的建筑,而不是像人类和老鼠那样的两股。我们假设,这只猛犸象死后不久,样品在西伯利亚寒冷中自发冻干,导致玻璃化转变,在纳米尺度上保存了古代染色体的亚化石。
    Analyses of ancient DNA typically involve sequencing the surviving short oligonucleotides and aligning to genome assemblies from related, modern species. Here, we report that skin from a female woolly mammoth (†Mammuthus primigenius) that died 52,000 years ago retained its ancient genome architecture. We use PaleoHi-C to map chromatin contacts and assemble its genome, yielding 28 chromosome-length scaffolds. Chromosome territories, compartments, loops, Barr bodies, and inactive X chromosome (Xi) superdomains persist. The active and inactive genome compartments in mammoth skin more closely resemble Asian elephant skin than other elephant tissues. Our analyses uncover new biology. Differences in compartmentalization reveal genes whose transcription was potentially altered in mammoths vs. elephants. Mammoth Xi has a tetradic architecture, not bipartite like human and mouse. We hypothesize that, shortly after this mammoth\'s death, the sample spontaneously freeze-dried in the Siberian cold, leading to a glass transition that preserved subfossils of ancient chromosomes at nanometer scale.
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  • 文章类型: Journal Article
    目的:由于化石记录的零碎性质,化石森林生态系统的复杂性很难重建。然而,对保存完好的个体化石进行详细的形态解剖学研究可以提供有关树木生长和生态的关键信息,包括没有现代类似物的生物群落,例如在过去的温室气候事件中在极地地区发展的郁郁葱葱的森林。
    方法:我们描述了来自南极洲中三叠纪(约240Ma)沉积物的不寻常的茎,具有超过100个非常狭窄的生长环和穿过木材的明显持久的血管痕迹。使用醋酸纤维素剥离技术制备样品的切片,以确定其系统亲和力并分析其生长。
    结果:新化石显示出与伍德沃斯利亚属和南极洲三叠纪针叶树茎的相似之处,并被分配给针叶树。血管痕迹被解释为保留在躯干上的小分支的痕迹。生长环分析揭示了化石记录中报告的最慢的增长率之一,平均每季0.2毫米。当树在三叠纪极圆中生长时,来自其他化石树的沉积学数据和生长环信息,包括来自同一个地方的,支持该地区存在有利条件。
    结论:该标本被解释为矮针叶树,在普遍有利的区域气候下生长,但由于当地条件恶劣,其生长受到抑制。这是第一次在化石记录中发现生长受到抑制的树,提供对温室气候下极地森林结构的新见解,更一般地说,深入了解树木群落的复杂性。
    OBJECTIVE: The complexity of fossil forest ecosystems is difficult to reconstruct due to the fragmentary nature of the fossil record. However, detailed morpho-anatomical studies of well-preserved individual fossils can provide key information on tree growth and ecology, including in biomes with no modern analog such as the lush forests that developed in the polar regions during past greenhouse climatic episodes.
    METHODS: We describe an unusual-looking stem from Middle Triassic (ca 240 Ma) deposits of Antarctica with over 100 very narrow growth-rings and conspicuous persistent vascular traces through the wood. Sections of the specimen were prepared using the cellulose acetate peel technique to determine its systematic affinities and analyse its growth.
    RESULTS: The new fossil shows similarities with the form genus Woodworthia and with conifer stems from the Triassic of Antarctica, and is assigned to the conifers. Vascular traces are interpreted as those of small branches retained on the trunk. Growth-ring analyses reveal one of the slowest growth rates reported in the fossil record, with an average of 0.2 mm/season. While the tree was growing within the Triassic polar circle, sedimentological data and growth-ring information from other fossil trees, including from the same locality, support the presence of favorable conditions in the region.
    CONCLUSIONS: The specimen is interpreted as a dwarf conifer tree that grew under a generally favorable regional climate but whose growth was suppressed due to stressful local site conditions. This is the first time that a tree with suppressed growth is identified as such in the fossil record, providing new insights on the structure of polar forests under greenhouse climates and, more generally, on the complexity of tree communities in deep time.
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  • 文章类型: Journal Article
    甲虫的进化历史可以追溯到石炭纪,中生代化石在阐明现存家族的早期进化中起着关键作用。尽管它们保存在琥珀色中,破译中生代类甲虫的系统位置仍然具有挑战性。这里,我们描述并说明了来自白垩纪中期Kachin琥珀的一种新的类似于tr八卦的血统,FoveapeltisrutaiLi,科利巴奇,Liu&Cai,gen.等sp.11月。Foveapeltis在Cleroidea中脱颖而出,这是因为每个高精子上都存在一个明显的大腔。虽然Foveapeltis的确切系统发育位置仍然不确定,我们基于受约束的系统发育分析对其潜在亲和力进行了讨论。
    Beetles have a remote evolutionary history dating back to the Carboniferous, with Mesozoic fossils playing a pivotal role in elucidating the early evolution of extant families. Despite their exceptional preservation in amber, deciphering the systematic positions of Mesozoic trogossitid-like beetles remains challenging. Here, we describe and illustrate a new trogossitid-like lineage from mid-Cretaceous Kachin amber, Foveapeltis rutai Li, Kolibáč, Liu & Cai, gen. et sp. nov. Foveapeltis stands out within the Cleroidea due to the presence of a significant large cavity on each hypomeron. While the exact phylogenetic placement of Foveapeltis remains uncertain, we offer a discussion on its potential affinity based on our constrained phylogenetic analyses.
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  • 文章类型: Journal Article
    头撞是一种好斗的行为,在现存的大角羊(Oviscanadensis)中最普遍地描述和例证。当行为上在灭绝类群中提出时,这些生物经常被描绘成类Ovis,因为它们使用了改良的颅骨结构来相互撞击。头撞的好斗行为假说在脊椎动物化石文献中(不仅在恐龙中)有着悠久而丰富的历史,但是,在陆生脊椎动物化石中,这种行为假设的核心与骨性颅骨穹顶扩大有关,骨性结构基本上没有当前的对应物。文献中发现的一个令人困惑的问题是,虽然“头撞”这个词听起来足够简单,很少有术语被用来描述这种假设的行为。与这个特殊问题有关,潜在的脑外伤和这种提议的肥胖的优点已经在很大程度上通过上覆的骨结构的潜在变形来评估;尽管现有的分类群很容易表明脑损伤可以而且确实可以发生而不会损害骨骼。此外,作为行为对应物进行比较的现存分类单元是至关重要的,不仅是因为它们表现出的好斗行为和形态,还有他们从事这种行为的方式。绵羊(Ovis),Warthogs(Phacochoerus),和野牛(野牛)都从事各种形式的“头撞”,但是颅骨形态和战斗方式明显不同。假设在理论上像现存的对应物一样从事头撞的灭绝生物意味着特定的打击:接触表面,速度,速度,以及整个行动是如何执行的。这篇评论研究了这些圆顶化石类群中头撞行为假说的历史和用法,他们各自现存的行为对应物,并提出了与头撞有关的特定行为术语的协议,以阻止未来的混乱。我们还讨论了化石记录中战斗颅骨结构的不同形态,以及灭绝类群中头撞引起的脑损伤的含义。最后,我们得出的结论是,关于这种行为剧目,对化石类群的艺术重建有一些潜在的影响。
    Headbutting is a combative behavior most popularly portrayed and exemplified in the extant bighorn sheep (Ovis canadensis). When behaviorally proposed in extinct taxa, these organisms are oft depicted Ovis-like as having used modified cranial structures to combatively slam into one another. The combative behavioral hypothesis of headbutting has a long and rich history in the vertebrate fossil literature (not just within Dinosauria), but the core of this behavioral hypothesis in fossil terrestrial vertebrates is associated with an enlarged osseous cranial dome-an osteological structure with essentially no current counterpart. One confounding issue found in the literature is that while the term \"headbutting\" sounds simplistic enough, little terminology has been used to describe this hypothesized behavior. And pertinent to this special issue, potential brain trauma and the merits of such proposed pugilism have been assessed largely from the potential deformation of the overlying osseous structure; despite the fact that extant taxa readily show that brain damage can and does occur without osteological compromise. Additionally, the extant taxa serving as the behavioral counterpart for comparison are critical, not only because of the combative behaviors and morphologies they display, but also the way they engage in such behavior. Sheep (Ovis), warthogs (Phacochoerus), and bison (Bison) all engage in various forms of \"headbutting\", but the cranial morphologies and the way each engages in combat is markedly different. To hypothesize that an extinct organism engaged in headbutting like an extant counterpart in theory implies specific striking:contacting surfaces, speed, velocity, and overall how that action was executed. This review examines the history and usage of the headbutting behavioral hypothesis in these dome-headed fossil taxa, their respective extant behavioral counterparts, and proposes a protocol for specific behavioral terms relating to headbutting to stem future confusion. We also discuss the disparate morphology of combative cranial structures in the fossil record, and the implications of headbutting-induced brain injury in extinct taxa. Finally, we conclude with some potential implications for artistic reconstructions of fossil taxa regarding this behavioral repertoire.
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  • 文章类型: Journal Article
    中国的义县组(下白垩统)以其早期被子植物的化石而闻名于世,但是到目前为止,只有一种花蕾记录(Archaebudalinguanensis),其中仅记录了花蕾的表面,而没有内部细节。这种对花蕾的部分认识阻碍了我们对花卉进化的理解,这些知识的空白需要填补。我们的新标本是从逸县组的露头中收集的(Barremian-Aptian,下白垩纪)靠近大王张子,凌源,辽宁,中国。我们的观察揭示了一种新的花芽化石,始祖鸟科。11月。,来自中国的下白垩纪。易县组的这一新记录不仅证实了花蕾中预期的雌蕊(加上可能的雄蕊)的真实存在,而且强调了白垩纪早期典型花的发生。这些新信息为花卉性增加了第一手数据,授粉,和进化。
    The Yixian Formation (Lower Cretaceous) in China is famous worldwide for its fossils of early angiosperms, but there has been only one record of flower buds (Archaebuda lingyuanensis) hitherto, in which only the surface of the flower bud was documented while no internal details were known. Such a partial knowledge of flower buds hinders our understanding of the evolution of flowers, and this knowledge lacuna needs to be filled. Our new specimen was collected from an outcrop of the Yixian Formation (Barremian-Aptian, Lower Cretaceous) near Dawangzhangzi, Lingyuan, Liaoning, China. Our observations reveal a new fossil flower bud, Archaebuda cretaceae sp. nov., from the Lower Cretaceous of China. This new record of Archaebuda in the Yixian Formation not only confirms the truthful existence of the expected gynoecium (plus possible androecium) in a flower bud but also underscores the occurrence of typical flowers in the Early Cretaceous. This new information adds first-hand data to flower sexuality, pollination, and evolution.
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