epigenetic regulation

表观遗传调控
  • 文章类型: English Abstract
    探讨组蛋白H3K27me3甲基化及其调控酶JMJD3和EZH2在强直性脊柱炎(AS)Th17细胞分化中的作用,揭示它们在AS发病机制中的潜在参与,分析H3K27me3的甲基化状态及其与Th17相关因子的相互作用,为AS的临床治疗提供新的策略和靶点。
    本研究共纳入84例AS患者(42例活动性AS患者和42例AS稳定期患者),84名健康志愿者作为对照。收集血液样品。分离外周血单核细胞。进行ELISA测定以检查Th17细胞和相关细胞因子IL-21、IL-22和IL-17。RORc的mRNA表达,通过RT-PCR分析JAK2和STAT3,RORc的蛋白质表达,JAK2/STAT3通路蛋白,通过Western印迹测定H3K27me3和相关蛋白酶(EZH2和JMJD3)。采用Pearson相关性分析H3K27me3、EZH2和JMJD3与Th细胞分化关键信号通路分子的相关性。
    RORc的mRNA表达,活动期组JAK2、STAT3明显高于稳定期组(P<0.05)。活性相组H3K27me3和EZH2的相对灰度值低于稳定相组,低于对照组,差异有统计学意义(P<0.05)。JMJD3、RORc、活动相组的JAK2、pJAK2、STAT3、pSTAT3蛋白明显高于稳定期组,均高于对照组(均P<0.05)。活动期组Th17比例及炎症因子表达水平高于其他两组(P<0.05)。H3K27me3与RORc呈负相关,JAK2、STAT3、IL-17、JMJD3与JAK2、STAT3、IL-17呈正相关,EZH2与JAK2、STAT3、IL-17呈负相关(均P<0.05)。
    H3K27me3在AS中的低表达受基因位点JMJD3和EZH2的影响,可以调节Th17细胞的分化,从而在AS的发病和进展中发挥作用。
    UNASSIGNED: To investigate the roles of histone H3K27me3 methylation and its regulatory enzymes JMJD3 and EZH2 in the differentiation of Th17 cells in ankylosing spondylitis (AS), to unveil their potential involvement in the pathogenesis of AS, and to provide new strategies and targets for the clinical treatment of AS by analyzing the methylation state of H3K27me3 and its interactions with Th17-related factors.
    UNASSIGNED: A total of 84 AS patients (42 active AS patiens and 42 patients in the stable phase of AS) were enrolled for the study, while 84 healthy volunteers were enrolled as the controls. Blood samples were collected. Peripheral blood mononuclear cells were isolated. ELISA assay was performed to examine Th17 cells and the relevant cytokines IL-21, IL-22, and IL-17. The mRNA expressions of RORc, JAK2, and STAT3 were analyzed by RT-PCR, the protein expressions of RORc, JAK2/STAT3 pathway protein, H3K27me3 and the relevant protease (EZH2 and JMJD3) were determined by Western blot. Correlation between H3K27me3, EZH2 and JMJD3 and the key signaling pathway molecules of Th cell differentiation was analyzed by Pearson correlation analysis.
    UNASSIGNED: The mRNA expressions of RORc, JAK2, and STAT3 were significantly higher in the active phase group than those in the stable phase group ( P<0.05). The relative grayscale values of H3K27me3 and EZH2 in the active phase group were lower than those of the stable phase group, which were lower than those of the control group, with the differences being statistically significant ( P<0.05). The relative grayscale values of JMJD3, RORc, JAK2, pJAK2, STAT3, and pSTAT3 proteins were significantly higher in the active phase group than those in the stable phase group, which were higher than those in the control group (all P<0.05). The proportion of Th17 and the expression level of inflammatory factors in the active period group were higher than those in the other two groups (P<0.05). H3K27me3 was negatively correlated with RORc, JAK2, STAT3, and IL-17, JMJD3 was positvely correlated with JAK2, STAT3, and IL-17, and EZH2 was negatively correlated with JAK2, STAT3, and IL-17 (all P<0.05).
    UNASSIGNED: The low expression of H3K27me3 in AS is influenced by the gene loci JMJD3 and EZH2, which can regulate the differentiation of Th17 cells and thus play a role in the pathogenesis and progression of AS.
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  • 文章类型: Journal Article
    肝细胞癌(HCC)是全球癌症相关死亡的重要原因。全身治疗是肝癌晚期的唯一治疗选择,有限的治疗反应。在这项研究中,我们评估了四种N-酰腙(NAH)衍生物的抗肿瘤潜力,即LASSBio-1909、1911、1935和1936,在HCC细胞系上。我们以前已经证明,上述NAH衍生物选择性抑制肺癌细胞中的组蛋白脱乙酰酶6(HDAC6),但它们对肝癌细胞的影响尚未被探索。因此,本研究旨在评估NAH衍生物对肝癌细胞增殖行为的影响。LASSBio-1911是对肝癌细胞最具细胞毒性的化合物,然而,它对正常细胞的影响很小。我们的结果表明,LASSBio-1911抑制HCC细胞中的HDAC6,导致细胞周期停滞和细胞增殖减少。有丝分裂开始的细胞频率也增加了,这与干扰有丝分裂纺锤体的形成有关。这些事件伴随着CDKN1AmRNA水平的升高,CCNB1蛋白的积累,和持续的ERK1磷酸化。此外,LASSBio-1911诱导DNA损伤,导致衰老和/或凋亡。我们的发现表明,HDAC6的选择性抑制可能为晚期HCC的治疗提供有效的治疗策略。包括整合了病毒基因组的肿瘤亚型。Further,需要进行体内研究以验证LASSBio-1911对肝癌的抗肿瘤作用。
    Hepatocellular carcinoma (HCC) is a significant contributor to cancer-related deaths globally. Systemic therapy is the only treatment option for HCC at an advanced stage, with limited therapeutic response. In this study, we evaluated the antitumor potential of four N-acylhydrazone (NAH) derivatives, namely LASSBio-1909, 1911, 1935, and 1936, on HCC cell lines. We have previously demonstrated that the aforementioned NAH derivatives selectively inhibit histone deacetylase 6 (HDAC6) in lung cancer cells, but their effects on HCC cells have not been explored. Thus, the present study aimed to evaluate the effects of NAH derivatives on the proliferative behavior of HCC cells. LASSBio-1911 was the most cytotoxic compound against HCC cells, however its effects were minimal on normal cells. Our results showed that LASSBio-1911 inhibited HDAC6 in HCC cells leading to cell cycle arrest and decreased cell proliferation. There was also an increase in the frequency of cells in mitosis onset, which was associated with disturbing mitotic spindle formation. These events were accompanied by elevated levels of CDKN1A mRNA, accumulation of CCNB1 protein, and sustained ERK1 phosphorylation. Furthermore, LASSBio-1911 induced DNA damage, resulting in senescence and/or apoptosis. Our findings indicate that selective inhibition of HDAC6 may provide an effective therapeutic strategy for the treatment of advanced HCC, including tumor subtypes with integrated viral genome. Further, in vivo studies are required to validate the antitumor effect of LASSBio-1911 on liver cancer.
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  • 文章类型: Journal Article
    最近的研究揭示了导致骨细胞转录变化的表观遗传调控的几个重要途径。休息辅抑制因子2(Rcor2)是赖氨酸特异性组蛋白去甲基酶1(Lsd1)的共调节因子,一种与成骨细胞活性相关的去甲基酶,造血干细胞分化和不同肿瘤的恶性程度。然而,尚未详细研究Rcor2在成骨细胞分化中的作用。我们先前已经表明Rcor2在间充质基质细胞(MSC)中,特别是在成骨细胞谱系中高度表达。进一步表征了Rcor2在体外成骨细胞分化中的作用,我们在此证明了MC3T3-E1细胞中Rcor2的慢病毒沉默导致成骨细胞分化降低。碱性磷酸酶和vonKossa染色降低以及几种成骨细胞相关标记基因的表达降低表明了这一点。Rcor2下调的MC3T3-E1细胞的RNA测序显示Rcor2靶基因的抑制降低,以及大多数差异表达基因的显着上调。而杂合,体内Rcor2的整体丢失不会导致可检测的骨表型,肢芽间充质细胞中Rcor2的条件性缺失导致皮质骨体积适度减少。这些发现并未因卵巢切除术或胫骨骨折引起的骨形成挑战而加剧。此外,Rcor2的整体缺失导致体内白色脂肪组织减少,并降低了原代细胞在体外分化为脂肪细胞的能力。Rcor2的条件性缺失导致骨折骨痂中的肥胖减少。一起来看,这些结果表明,间充质基质细胞分化的表观遗传调控是由Rcor2介导的,因此Rcor2可能在确定MSC命运中起重要作用。
    Recent research has revealed several important pathways of epigenetic regulation leading to transcriptional changes in bone cells. Rest Corepressor 2 (Rcor2) is a coregulator of Lysine-specific histone demethylase 1 (Lsd1), a demethylase linked to osteoblast activity, hematopoietic stem cell differentiation and malignancy of different neoplasms. However, the role of Rcor2 in osteoblast differentiation has not yet been examined in detail. We have previously shown that Rcor2 is highly expressed in mesenchymal stromal cells (MSC) and particularly in the osteoblastic lineage. The role of Rcor2 in osteoblastic differentiation in vitro was further characterized and we demonstrate here that lentiviral silencing of Rcor2 in MC3T3-E1 cells led to a decrease in osteoblast differentiation. This was indicated by decreased alkaline phosphatase and von Kossa stainings as well as by decreased expression of several osteoblast-related marker genes. RNA-sequencing of the Rcor2-downregulated MC3T3-E1 cells showed decreased repression of Rcor2 target genes, as well as significant upregulation of majority of the differentially expressed genes. While the heterozygous, global loss of Rcor2 in vivo did not lead to a detectable bone phenotype, conditional deletion of Rcor2 in limb-bud mesenchymal cells led to a moderate decrease in cortical bone volume. These findings were not accentuated by challenging bone formation by ovariectomy or tibial fracture. Furthermore, a global deletion of Rcor2 led to decreased white adipose tissue in vivo and decreased the capacity of primary cells to differentiate into adipocytes in vitro. The conditional deletion of Rcor2 led to decreased adiposity in fracture callus. Taken together, these results suggest that epigenetic regulation of mesenchymal stromal cell differentiation is mediated by Rcor2, which could thus play an important role in defining the MSC fate.
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  • 文章类型: Journal Article
    尽管癌症免疫疗法已成为一定范围的实体癌和血液恶性肿瘤的成功治疗策略,免疫疗法的这种疗效受到免疫“冷”状态导致的成功率有限的阻碍。cGAS-STING信号通路是一个进化上保守的系统,可以发现细胞质DNA来调节先天免疫和适应性免疫反应。除了宿主防御和自身免疫性疾病,最近的进展现在已经扩展了cGAS-STING的作用,cGAS-STING被精确激活和紧密调节以提高抗癌免疫力。越来越多的证据表明,表观遗传调控在介导与cGAS-STING信号通路相关的关键基因表达中的关键作用。在这次审查中,我们重点介绍了cGAS和STING的结构和细胞定位以及cGAS-STING信号转导的细胞内级联反应。我们进一步总结了控制cGAS和STING在癌症中表达的表观遗传调控机制的最新发现。该综述旨在为靶向控制cGAS和STING基因表达的表观遗传机制,促进临床上更有效的联合治疗方案的发展,提高癌症免疫治疗的疗效提供理论依据和参考。
    Although cancer immunotherapy has become a successful therapeutic strategy in a certain range of solid cancer and hematological malignancies, this efficacy of immunotherapy is impeded by limited success rates due to an immunologically \"cold\" state. The cGAS-STING signaling pathway is an evolutionarily conserved system which can find cytoplasmic DNA to regulate the innate immune and adaptive immune response. Beyond the host defense and autoimmune disorders, recent advances have now expanded the roles of cGAS-STING that is precise activated and tight regulated to improve anticancer immunity. Mounting evidence now has shown the crucial role of epigenetic regulation in mediating the expression of key genes associated with the cGAS-STING signaling pathway. In this review, we highlight the structure and cellular localization of cGAS and STING as well as intracellular cascade reaction of cGAS-STING signal transduction. We further summarize recent findings of epigenetic regulatory mechanisms that control the expression of cGAS and STING in cancer. The review aims to offer theoretical basis and reference for targeting the epigenetic mechanisms that control cGAS and STING gene expression to promote the development of more effective combination therapeutic regimens to enhance the efficacy of cancer immunotherapy in clinical practice and cancer clinical and cancer research workers.
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  • 文章类型: Journal Article
    杏仁核及其中央核(CeA)的神经可塑性与疼痛调节和疼痛行为有关,但是细胞机制还没有很好的理解。这里,我们探讨了小电导Ca2+激活钾(SK)通道在疼痛相关杏仁核可塑性中的作用.在神经性疼痛模型中,在CeA内应用SK通道阻滞剂(apamin)对对照大鼠疼痛行为的促进作用消失,而SK通道激活剂(NS309)抑制神经性大鼠的疼痛行为,而不是假对照,表明杏仁核SK通道的抑制行为效应的丧失。由于SK通道介导的超极化后介质(MAHP)的丢失,脑片电生理学发现CeA神经元在神经性疼痛中的过度兴奋,伴随着SK2通道蛋白和mRNA表达的降低,与转录前机制一致。潜在机制涉及SK2基因的表观遗传沉默,这是由于SK2启动子区CpG岛的DNA甲基化增加以及神经性疼痛中CeA中甲基化CpG位点的变化。这项研究将杏仁核(CeA)中SK通道的表观遗传失调确定为神经性疼痛相关可塑性和行为的新机制,可靶向控制杏仁核活性异常增强和慢性神经性疼痛。
    Neuroplasticity in the amygdala and its central nucleus (CeA) is linked to pain modulation and pain behaviors, but cellular mechanisms are not well understood. Here, we addressed the role of small-conductance Ca2+-activated potassium (SK) channels in pain-related amygdala plasticity. The facilitatory effects of the intra-CeA application of an SK channel blocker (apamin) on the pain behaviors of control rats were lost in a neuropathic pain model, whereas an SK channel activator (NS309) inhibited pain behaviors in neuropathic rats but not in sham controls, suggesting the loss of the inhibitory behavioral effects of amygdala SK channels. Brain slice electrophysiology found hyperexcitability of CeA neurons in the neuropathic pain condition due to the loss of SK channel-mediated medium afterhyperpolarization (mAHP), which was accompanied by decreased SK2 channel protein and mRNA expression, consistent with a pretranscriptional mechanisms. The underlying mechanisms involved the epigenetic silencing of the SK2 gene due to the increased DNA methylation of the CpG island of the SK2 promoter region and the change in methylated CpG sites in the CeA in neuropathic pain. This study identified the epigenetic dysregulation of SK channels in the amygdala (CeA) as a novel mechanism of neuropathic pain-related plasticity and behavior that could be targeted to control abnormally enhanced amygdala activity and chronic neuropathic pain.
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  • 文章类型: Journal Article
    背景:胃肠道恶性肿瘤包括对全球健康构成重大挑战的多种癌症。主要组织相容性复合体(MHC)在免疫监视中起着关键作用,协调免疫系统对肿瘤细胞的识别和消除。然而,MHC基因表达的复杂调控易受动态表观遗传修饰,会影响功能和病理结果。
    方法:通过了解驱动MHC下调的表观遗传学改变,深入了解免疫逃逸的分子机制,肿瘤进展,和免疫疗法抗性。本系统综述审查了当前有关食管MHC失调的表观遗传机制的文献。胃,胰腺,肝脏和结肠直肠恶性肿瘤。讨论了靶向异常表观遗传修饰以恢复MHC表达和免疫治疗干预的有效性的潜在临床意义。
    结论:表观遗传靶向疗法与免疫疗法的整合对于改善胃肠道恶性肿瘤患者的临床结果具有巨大的潜力,并且是未来研究和治疗发展的令人信服的途径。
    BACKGROUND: Gastrointestinal malignancies encompass a diverse group of cancers that pose significant challenges to global health. The major histocompatibility complex (MHC) plays a pivotal role in immune surveillance, orchestrating the recognition and elimination of tumor cells by the immune system. However, the intricate regulation of MHC gene expression is susceptible to dynamic epigenetic modification, which can influence functionality and pathological outcomes.
    METHODS: By understanding the epigenetic alterations that drive MHC downregulation, insights are gained into the molecular mechanisms underlying immune escape, tumor progression, and immunotherapy resistance. This systematic review examines the current literature on epigenetic mechanisms that contribute to MHC deregulation in esophageal, gastric, pancreatic, hepatic and colorectal malignancies. Potential clinical implications are discussed of targeting aberrant epigenetic modifications to restore MHC expression and 0 the effectiveness of immunotherapeutic interventions.
    CONCLUSIONS: The integration of epigenetic-targeted therapies with immunotherapies holds great potential for improving clinical outcomes in patients with gastrointestinal malignancies and represents a compelling avenue for future research and therapeutic development.
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  • 文章类型: Journal Article
    Anoikis,一种由细胞-细胞外基质相互作用丧失引起的细胞凋亡形式,是癌细胞转移的重要屏障。然而,这一过程的表观遗传调控仍有待探索。这里,我们证明,组蛋白去乙酰化酶sirtuin6(SIRT6)在赋予大肠癌(CRC)细胞抗失巢凋亡中起关键作用。SIRT6蛋白水平与CRC细胞失巢凋亡呈负相关。SIRT6的过表达减少,而SIRT6的敲低增加脱离诱导的失巢凋亡。机械上,SIRT6抑制N-myc下游调节基因1(NDRG1)的转录,AKT信号通路的负调节因子。我们观察到SIRT6在晚期CRC样本中的上调。一起,我们的发现揭示了一种调节CRC细胞失巢的新表观遗传程序.
    Anoikis, a form of apoptosis resulting from the loss of cell-extracellular matrix interaction, is a significant barrier to cancer cell metastasis. However, the epigenetic regulation of this process remains to be explored. Here, we demonstrate that the histone deacetylase sirtuin 6 (SIRT6) plays a pivotal role in conferring anoikis resistance to colorectal cancer (CRC) cells. The protein level of SIRT6 is negatively correlated with anoikis in CRC cells. The overexpression of SIRT6 decreases while the knockdown of SIRT6 increases detachment-induced anoikis. Mechanistically, SIRT6 inhibits the transcription of N-myc downstream-regulated gene 1 (NDRG1), a negative regulator of the AKT signaling pathway. We observed the up-regulation of SIRT6 in advanced-stage CRC samples. Together, our findings unveil a novel epigenetic program regulating the anoikis of CRC cells.
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  • 文章类型: Journal Article
    植物在环境中面临着各种各样的挑战,来自生物体(生物胁迫)和非生物因素(非生物胁迫)。在影响作物的主要非生物胁迫中,温度的变化,水供应,盐度,和寒冷对作物产量和农产品质量构成重大威胁。植物具有显著的适应性和恢复力,他们利用一系列遗传和表观遗传机制来应对和应对非生物胁迫。支持植物对抗这些胁迫的一些关键的表观遗传机制包括DNA甲基化和组蛋白修饰。这些机制在使植物能够在具有挑战性的环境条件下忍受和茁壮成长方面发挥着关键作用。不同的表观遗传机制应对非生物胁迫的机制各不相同。每种植物物种和胁迫类型都可能引发不同的表观遗传反应,强调植物在胁迫条件下适应能力的复杂性。这篇综述着重于表观遗传学在增强植物在各种非生物胁迫下的生存能力和超越能力方面的重要性。它强调了我们对导致植物非生物胁迫耐受性的表观遗传机制的理解的最新进展。这种不断增长的知识对于塑造旨在减轻非生物胁迫对多种作物的影响的未来努力至关重要。
    Plants face a wide array of challenges in their environment, both from living organisms (biotic stresses) and non-living factors (abiotic stresses). Among the major abiotic stressors affecting crop plants, variations in temperature, water availability, salinity, and cold pose significant threats to crop yield and the quality of produce. Plants possess remarkable adaptability and resilience, and they employ a range of genetic and epigenetic mechanisms to respond and cope with abiotic stresses. A few crucial set of epigenetic mechanisms that support plants in their battle against these stresses includes DNA methylation and histone modifications. These mechanisms play a pivotal role in enabling plants to endure and thrive under challenging environmental conditions. The mechanisms of different epigenetic mechanisms in responding to the abiotic stresses vary. Each plant species and type of stress may trigger distinct epigenetic responses, highlighting the complexity of the plant\'s ability to adapt under stress conditions. This review focuses on the paramount importance of epigenetics in enhancing a plant\'s ability to survive and excel under various abiotic stresses. It highlights recent advancements in our understanding of the epigenetic mechanisms that contribute to abiotic stress tolerance in plants. This growing knowledge is pivotal for shaping future efforts aimed at mitigating the impact of abiotic stresses on diverse crop plants.
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  • 文章类型: Journal Article
    SRY(性别决定区)盒2(SOX2)是一种必需的转录因子,在激活参与胚胎前和胚胎后发育的基因中起着至关重要的作用。成人组织稳态,和谱系规范。S0X2维持干细胞的自我更新性质并且参与诱导多能性干细胞的产生。SOX2蛋白含有特定的高迁移率基团结构域,其使得SOX2能够实现参与多种功能的能力。有关SOX2与基因调控元件有关的信息,信令网络,microRNA逐渐出现,SOX2的较高表达在功能上与各种癌症类型相关。S0X2通过细胞增殖和侵袭性肿瘤特性的增强促进致癌表型。越来越多的证据支持染色质的三维(高阶)折叠和通过染色质修饰对SOX2基因进行表观遗传控制,这意味着SOX2的表达水平可以通过表观遗传调节机制进行调节,具体来说,通过DNA甲基化和组蛋白H3修饰。鉴于此,并集中进一步了解SOX2在生理功能中的作用,SOX2在开发过程中的参与,准确地说,我们在胚胎前和胚胎后发育方面的知识进步,以及SOX2在这种情况下与肿瘤发展和癌症进展中的各种信号通路的相互作用,本文对其作为多种癌症治疗靶点的潜力进行了总结和讨论。
    SRY (Sex Determining Region) box 2 (SOX2) is an essential transcription factor that plays crucial roles in activating genes involved in pre- and post-embryonic development, adult tissue homeostasis, and lineage specifications. SOX2 maintains the self-renewal property of stem cells and is involved in the generation of induced pluripotency stem cells. SOX2 protein contains a particular high-mobility group domain that enables SOX2 to achieve the capacity to participate in a broad variety of functions. The information about the involvement of SOX2 with gene regulatory elements, signaling networks, and microRNA is gradually emerging, and the higher expression of SOX2 is functionally relevant to various cancer types. SOX2 facilitates the oncogenic phenotype via cellular proliferation and enhancement of invasive tumor properties. Evidence are accumulating in favor of three dimensional (higher order) folding of chromatin and epigenetic control of the SOX2 gene by chromatin modifications, which implies that the expression level of SOX2 can be modulated by epigenetic regulatory mechanisms, specifically, via DNA methylation and histone H3 modification. In view of this, and to focus further insights into the roles SOX2 plays in physiological functions, involvement of SOX2 during development, precisely, the advances of our knowledge in pre- and post-embryonic development, and interactions of SOX2 in this scenario with various signaling pathways in tumor development and cancer progression, its potential as a therapeutic target against many cancers are summarized and discussed in this article.
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  • 文章类型: Journal Article
    表观遗传学是指影响基因表达而不改变DNA序列的机制,如DNA甲基化和组蛋白修饰。这些表观遗传修饰可以调节基因转录,拼接,和稳定性,从而影响细胞分化,发展,和疾病的发生。牙本质的形成与牙髓干细胞(DPSC)的牙源性分化有内在联系,由于其不同的牙源性潜力,它们被认为是牙本质牙髓再生的最佳细胞来源,强烈的增殖和血管生成特征,许多研究已经证明了表观遗传调节在DPSC分化成特定细胞类型中的关键作用。因此,这篇综述提供了对表观遗传调控控制DPSC牙本质命运的机制的全面综述。
    Epigenetics refers to the mechanisms such as DNA methylation and histone modification that influence gene expression without altering the DNA sequence. These epigenetic modifications can regulate gene transcription, splicing, and stability, thereby impacting cell differentiation, development, and disease occurrence. The formation of dentin is intrinsically linked to the odontogenic differentiation of dental pulp stem cells (DPSCs), which are recognized as the optimal cell source for dentin-pulp regeneration due to their varied odontogenic potential, strong proliferative and angiogenic characteristics, and ready accessibility Numerous studies have demonstrated the critical role of epigenetic regulation in DPSCs differentiation into specific cell types. This review thus provides a comprehensive review of the mechanisms by which epigenetic regulation controls the odontogenesis fate of DPSCs.
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