cyclin B2

细胞周期蛋白 B2
  • 文章类型: Journal Article
    发现神经胶质瘤的新目标具有重大意义。我们在这里探索了表达模式,生物学功能,以及与神经胶质瘤中ORC6(起源识别复合物6)相关的潜在机制。通过生物信息学分析,我们发现人类神经胶质瘤组织中ORC6表达显著增加,与较差的总体生存率相关,肿瘤等级更高,和野生型异柠檬酸脱氢酶状态。此外,在从局部治疗的患者获得的神经胶质瘤组织中以及在各种原发性/建立的神经胶质瘤细胞中检测到ORC6过表达。进一步的生物信息学研究表明,与ORC6共表达的基因富含与癌症相关的多个信号级联。在原代和永生化(A172)神经胶质瘤细胞中,使用特异性shRNA或Cas9-sgRNA敲除(KO)消耗ORC6显着降低细胞活力和增殖,破坏细胞周期进程和移动性,并引发细胞凋亡。相反,通过慢病毒构建体增强ORC6表达增强了人神经胶质瘤细胞的恶性行为。ORC6成为关键致癌基因表达的关键调节因子,包括细胞周期蛋白A2,细胞周期蛋白B2和DNA拓扑异构酶II(TOP2A),在神经胶质瘤细胞内。ORC6的沉默或KO降低了这些基因的mRNA和蛋白质水平,而ORC6的过表达增加了它们在原发性神经胶质瘤细胞中的表达。生物信息学分析进一步鉴定RBPJ为ORC6的潜在转录因子。RBPJshRNA降低了原发性胶质瘤细胞中ORC6的表达,而它的过度表达增加了它。此外,在神经胶质瘤组织和细胞中检测到RBPJ蛋白与拟议的ORC6启动子区之间的结合显着增强。体内实验表明,ORC6KO后,小鼠脑中患者来源的神经胶质瘤异种移植物的生长显着降低。ORC6损耗,抑制增殖,细胞周期蛋白A2/B2/TOP2A的表达降低,在这些ORC6KO颅内胶质瘤异种移植物中检测到凋亡增加。总之,RBPJ驱动的ORC6过表达促进胶质瘤细胞生长,强调其作为有希望的治疗靶标的重要性。
    The discovery of novel oncotargets for glioma is of immense significance. We here explored the expression patterns, biological functions, and underlying mechanisms associated with ORC6 (origin recognition complex 6) in glioma. Through the bioinformatics analyses, we found a significant increase in ORC6 expression within human glioma tissues, correlating with poorer overall survival, higher tumor grade, and wild-type isocitrate dehydrogenase status. Additionally, ORC6 overexpression is detected in glioma tissues obtained from locally-treated patients and across various primary/established glioma cells. Further bioinformatics scrutiny revealed that genes co-expressed with ORC6 are enriched in multiple signaling cascades linked to cancer. In primary and immortalized (A172) glioma cells, depleting ORC6 using specific shRNA or Cas9-sgRNA knockout (KO) significantly decreased cell viability and proliferation, disrupted cell cycle progression and mobility, and triggered apoptosis. Conversely, enhancing ORC6 expression via a lentiviral construct augmented malignant behaviors in human glioma cells. ORC6 emerged as a crucial regulator for the expression of key oncogenic genes, including Cyclin A2, Cyclin B2, and DNA topoisomerase II (TOP2A), within glioma cells. Silencing or KO of ORC6 reduced the mRNA and protein levels of these genes, while overexpression of ORC6 increased their expression in primary glioma cells. Bioinformatics analyses further identified RBPJ as a potential transcription factor of ORC6. RBPJ shRNA decreased ORC6 expression in primary glioma cells, while its overexpression increased it. Additionally, significantly enhanced binding between the RBPJ protein and the proposed ORC6 promoter region was detected in glioma tissues and cells. In vivo experiments demonstrated a significant reduction in the growth of patient-derived glioma xenografts in the mouse brain subsequent to ORC6 KO. ORC6 depletion, inhibited proliferation, decreased expression of Cyclin A2/B2/TOP2A, and increased apoptosis were detected within these ORC6 KO intracranial glioma xenografts. Altogether, RBPJ-driven ORC6 overexpression promotes glioma cell growth, underscoring its significance as a promising therapeutic target.
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  • 文章类型: Journal Article
    背景:透明细胞肾细胞癌是肾细胞癌的主要类型。细胞周期蛋白B2(CCNB2)是B型细胞周期蛋白的一种亚型,与几种癌症的预后有关。本研究旨在探讨CCNB2与ccRCC进展的关系,构建一个新的lncRNAs相关模型来预测ccRCC患者的预后。
    方法:数据来自公共数据库。我们使用Kaplan-Meier生存分析鉴定了ccRCC中的CCNB2,单变量和多变量Cox回归,和基因本体论分析。然后进行外部验证。通过LASSO算法和多变量Cox回归基于预后lncRNAs构建风险模型。使用受试者工作特征(ROC)曲线来评估模型。进行共识聚类分析以对患者进行重新分层。最后,我们分析了肿瘤免疫微环境,并对潜在药物进行了筛选.
    结果:CCNB2与ccRCC的晚期临床病理参数和不良预后相关,是无病生存的独立预测因子。此外,CCNB2与已知的抑制性免疫检查点共享相同的表达模式。构建了依赖于三种预后CCNB2相关lncRNAs(SNHG17,VPS9D1-AS1和ZMIZ1-AS1)表达的风险模型。风险特征是ccRCC的独立预测因子。总生存期的ROC(AUC)曲线下面积为1-,3-,5-,8年期分别为0.704、0.702、0.741和0.763。高危组和组2具有更强的免疫原性,对免疫治疗更敏感。
    结论:CCNB2可能是预测ccRCC患者预后的重要生物标志物。此外,我们开发了一个新的lncRNAs相关风险模型,并鉴定了两个CCNB2相关分子簇.风险模型在预测ccRCC的总体生存率和免疫微环境方面表现良好。
    BACKGROUND: Clear cell renal cell carcinoma (ccRCC) is the main type of renal cell carcinoma. Cyclin B2 (CCNB2) is a subtype of B-type cyclin that is associated with the prognosis of several cancers. This study aimed to identify the relationship between CCNB2 and progression of ccRCC and construct a novel lncRNAs-related model to predict prognosis of ccRCC patients.
    METHODS: The data were obtained from public databases. We identified CCNB2 in ccRCC using Kaplan-Meier survival analysis, univariate and multivariate Cox regression, and Gene Ontology analysis. External validation was then performed. The risk model was constructed based on prognostic lncRNAs by the LASSO algorithm and multivariate Cox regression. Receiver operating characteristics (ROC) curves were used to evaluate the model. Consensus clustering analysis was performed to re-stratify the patients. Finally, we analyzed the tumor-immune microenvironment and performed screening of potential drugs.
    RESULTS: CCNB2 associated with late clinicopathological parameters and poor prognosis in ccRCC and was an independent predictor for disease-free survival. In addition, CCNB2 shared the same expression pattern with known suppressive immune checkpoints. A risk model dependent on the expression of three prognostic CCNB2-related lncRNAs (SNHG17, VPS9D1-AS1, and ZMIZ1-AS1) was constructed. The risk signature was an independent predictor of ccRCC. The area under the ROC (AUC) curve for overall survival at 1-, 3-, 5-, and 8-year was 0.704, 0.702, 0.741, and 0.763. The high-risk group and cluster 2 had stronger immunogenicity and were more sensitive to immunotherapy.
    CONCLUSIONS: CCNB2 could be an important biomarker for predicting prognosis in ccRCC patients. Furthermore, we developed a novel lncRNAs-related risk model and identified two CCNB2-related molecular clusters. The risk model performed well in predicting overall survival and immunological microenvironment of ccRCC.
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  • 文章类型: Meta-Analysis
    背景:细胞周期蛋白B1和细胞周期蛋白B2是细胞周期进展的关键调节因子,并且与各种癌症的预后意义有关。这项荟萃分析旨在评估细胞周期蛋白B1和B2在乳腺癌中的表达对预后的价值。
    方法:对Pubmed,Embase,MEDLINE,WebofScience,科克伦图书馆包括与细胞周期蛋白B1和B2或CCNB1和CCNB2基因相关的生存数据和临床病理参数的研究。提取与细胞周期蛋白B1和B2表达相关的生存数据和临床病理参数。计算具有95%置信区间的集合风险比和比值比。进行亚组分析以评估异质性。评估了出版偏倚。
    结果:共23项研究纳入分析。细胞周期蛋白B1的高表达与较差的总生存期显著相关(风险比[HR]=1.69,P<0.01),疾病特异性生存率(HR=1.71,P<0.01),和无病生存率(HR=2.01,P=0.01)。细胞周期蛋白B2的高表达与较差的疾病特异性生存率相关(HR=2.46,P=.02)。临床病理参数与细胞周期蛋白B1和B2的表达没有显着关联。当结合细胞周期蛋白B1和B2的数据时,发现显著的年龄相关差异(比值比=0.62,P=.04).
    结论:这项荟萃分析提供了支持细胞周期蛋白B1和B2在乳腺癌中表达的预后意义的证据。细胞周期蛋白B1和B2的高表达与较差的生存率有关。表明它们作为乳腺癌预后标志物的潜力。
    BACKGROUND: Cyclin B1 and cyclin B2 are key regulators of cell cycle progression and have been implicated in the prognostic significance of various cancers. This meta-analysis aimed to evaluate the prognostic value of cyclin B1 and B2 expression in breast cancer.
    METHODS: A comprehensive literature search was conducted on Pubmed, Embase, MEDLINE, Web of Science, and Cochrane library. Studies with survival data and clinicopathological parameters associated with cyclin B1 and B2 or CCNB1 and CCNB2 genes were included. Survival data and clinicopathological parameters associated with cyclin B1 and B2 expression were extracted. Pooled hazard ratios and odds ratios with 95% confidence intervals were calculated. Subgroup analysis was conducted to assess heterogeneity. Publication bias was evaluated.
    RESULTS: A total of 23 studies were included in the analysis. High expression of cyclin B1 was significantly associated with worse overall survival (hazard ratio [HR] = 1.69, P < .01), disease-specific survival (HR = 1.71, P < .01), and disease-free survival (HR = 2.01, P = .01). High expression of cyclin B2 was associated with worse disease-specific survival (HR = 2.46, P = .02). Clinicopathological parameters did not show significant associations with cyclin B1 and B2 expressions. When data on cyclin B1 and B2 were combined, a significant age-related difference was found (odds ratio = 0.62, P = .04).
    CONCLUSIONS: This meta-analysis provides evidence supporting the prognostic significance of cyclin B1 and B2 expression in breast cancer. High expression of cyclin B1 and B2 is associated with worse survival, indicating their potential as prognostic markers in breast cancer.
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  • 文章类型: Journal Article
    背景:细胞周期蛋白B2(CCNB2),Cyclin家族的一员,是多种癌症的致癌基因,包括鼻咽癌(NPC)。然而,NPC中CCNB2过表达的表观遗传学机制尚不清楚.本研究分析了CCNB2在鼻咽癌中的调控作用及其分子机制。
    方法:在GSE52068和GSE13597数据库中筛选出差异甲基化基因(DMG)和差异表达基因(DEG)。分别,和候选目标由维恩图确定。对选定的DMG和DEG进行GO注释和途径富集分析,并构建了一个PPI网络来精确定位集线器基因。PCR和qMSP检测细胞中CCNB2的表达和甲基化。将靶向CCNB2的siRNA转染入NPC细胞,和迁移,扩散,细胞周期,上皮-间质转化(EMT),肿瘤发生,和转移检查。探索了NPC中CCNB2过表达的上游因子。使用蛋白质印迹分析评估NPC细胞中的p53活性。
    结果:CCNB2在NPC中显示低甲基化和过表达。CCNB2沉默抑制细胞迁移,扩散,细胞周期进入,EMT。JMJD6在NPC中过表达,并通过去甲基化上调CCNB2。JMJD6逆转了CCNB2下调的影响,导致体外细胞活性升高,体内致瘤和转移活性升高。CCNB2阻断了p53通路,而p53通路抑制剂逆转了CCNB2沉默的作用,从而增加了NPC细胞的活性。
    结论:JMJD6通过使CCNB2去甲基化增强CCNB2转录,从而抑制p53通路并促进NPC进展。
    BACKGROUND: Cyclin B2 (CCNB2), a member of the cyclin family, is an oncogene in multiple cancers, including nasopharyngeal carcinoma (NPC). However, the epigenetics mechanism for CCNB2 overexpression in NPC remains unclear. This study dissects the regulatory role of CCNB2 in NPC and the molecular mechanism.
    METHODS: Differentially methylated genes (DMG) and differentially expressed genes (DEG) were screened out in GSE52068 and GSE13597 databases, respectively, and candidate targets were identified by the Venn diagram. GO annotation and pathway enrichment analyses were performed on selected DMG and DEG, and a PPI network was constructed to pinpoint hub genes. PCR and qMSP were conducted to detect the expression and methylation of CCNB2 in cells. The siRNA targeting CCNB2 was transfected into NPC cells, and the migration, proliferation, cell cycle, epithelial-mesenchymal transition (EMT), tumorigenesis, and metastasis were examined. The upstream factor responsible for CCNB2 overexpression in NPC was explored. The p53 activity in NPC cells was assessed using western blot analysis.
    RESULTS: CCNB2 showed hypomethylation and overexpression in NPC. CCNB2 silencing inhibited cell migration, proliferation, cell cycle entry, and EMT. JMJD6 was overexpressed in NPC and upregulated CCNB2 through demethylation. JMJD6 reversed the effects of CCNB2 downregulation, resulting in elevated cellular activity in vitro and tumorigenic and metastatic activities in vivo. CCNB2 blocked the p53 pathway, while the p53 pathway inhibitor reversed the effect of CCNB2 silencing to increase the activity of NPC cells.
    CONCLUSIONS: JMJD6 enhanced CCNB2 transcription by demethylating CCNB2, thereby repressing the p53 pathway and promoting NPC progression.
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  • 文章类型: Preprint
    在许多物种中,早期胚胎有丝分裂以非常快的速度进行,但是这个速度是如何实现的还不清楚。在这里,我们发现在秀丽隐杆线虫早期胚胎中,细胞周期蛋白B3是快速胚胎有丝分裂的主要驱动因素。后生动物通常具有三种细胞周期蛋白B同工型,它们与Cdk1激酶相关并激活Cdk1激酶以协调有丝分裂事件:相关的细胞周期蛋白B1和B2以及更发散的细胞周期蛋白B3。我们表明,尽管表达细胞周期蛋白B1和B2的胚胎支持缓慢的有丝分裂(NEBD至后期〜600s),细胞周期蛋白B3的存在主要驱动野生型胚胎中观察到的~3倍快的有丝分裂。CYB-1/2驱动的有丝分裂比CYB-3驱动的有丝分裂更长,主要是因为有丝分裂事件本身的进展较慢,而不是由于纺锤体检查点的激活或后期激活剂CDC-20的抑制性磷酸化而延迟后期开始。将cyclinB1添加到cyclinB3-only有丝分裂会在完成染色体排列和后期开始之间引入~60s延迟,这可能确保分离保真度;这种延迟是由CDC-20上的抑制性磷酸化介导的。因此,细胞周期蛋白B3在驱动有丝分裂事件中的优势,再加上在后期开始时引入短暂的细胞周期蛋白B1依赖性延迟,设定快速的步伐,并确保早期秀丽隐杆线虫胚胎有丝分裂的保真度。
    In many species, early embryonic mitoses proceed at a very rapid pace, but how this pace is achieved is not understood. Here we show that in the early C. elegans embryo, cyclin B3 is the dominant driver of rapid embryonic mitoses. Metazoans typically have three cyclin B isoforms that associate with and activate Cdk1 kinase to orchestrate mitotic events: the related cyclins B1 and B2 and the more divergent cyclin B3. We show that whereas embryos expressing cyclins B1 and B2 support slow mitosis (NEBD to Anaphase ~ 600s), the presence of cyclin B3 dominantly drives the ~3-fold faster mitosis observed in wildtype embryos. CYB-1/2-driven mitosis is longer than CYB-3-driven mitosis primarily because the progression of mitotic events itself is slower, rather than delayed anaphase onset due to activation of the spindle checkpoint or inhibitory phosphorylation of the anaphase activator CDC-20. Addition of cyclin B1 to cyclin B3-only mitosis introduces an ~60s delay between the completion of chromosome alignment and anaphase onset, which likely ensures segregation fidelity; this delay is mediated by inhibitory phosphorylation on CDC-20. Thus, the dominance of cyclin B3 in driving mitotic events, coupled to introduction of a short cyclin B1-dependent delay in anaphase onset, sets the rapid pace and ensures fidelity of mitoses in the early C. elegans embryo.
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  • 文章类型: Journal Article
    膀胱癌和口腔鳞状细胞癌严重影响人们的健康。然而,膀胱癌与OSCC之间的关系尚不清楚.从基因表达综合数据库获得GSE138206、GSE146483、GSE184616和膀胱癌数据集GSE65635、GSE100926。使用加权基因共表达网络分析来鉴定显著模块。通过基因本体论分析和京都基因和基因组百科全书进行功能富集分析。此外,还使用基因集富集分析来完成富集分析。比较毒性基因组学数据库发现与核心基因最相关的疾病。TargetScan用于预测microRNA和靶基因的分析。在基因本体论分析中,差异表达的基因主要集中在细胞分化中,外区域,结构分子活性,和肌动蛋白结合。在京都基因和基因组分析百科全书中,差异表达基因主要富集在PI3K-Akt信号通路,癌症通路,和细胞外基质-受体相互作用。七个中心基因(细胞周期蛋白B2[CCNB2],TK1,CDC20,PCNA,CKS1B,获得CDCA5、MCM4)。hub基因(CCNB2,CDC20)在OSCC和膀胱癌样品中高度表达。CCNB2是膀胱癌和OSCC的常见癌基因之一。
    Bladder cancer and oral squamous cell carcinoma (OSCC) seriously affect people\'s health. However, the relationship between bladder cancer and OSCC remains unclear. Got GSE138206, GSE146483, GSE184616, and bladder cancer datasets GSE65635, GSE100926 from Gene Expression Omnibus database. Weighted gene co-expression network analysis was used to identify the significant module. Functional enrichment analysis was performed via the Gene Ontology analysis and Kyoto Encyclopedia of Genes and Genomes. Furthermore, the Gene Set Enrichment Analysis was also used to complete the enrichment analysis. Comparative Toxicogenomics Database found most relevant diseases to core genes. TargetScan is used to forecast analysis of microRNA and target genes. In Gene Ontology analysis, differentially expressed genes were mostly concentrated in cell differentiation, extrallular region, structural molecule activity, and actin binding. In Kyoto Encyclopedia of Genes and Genomes analysis, the differentially expressed genes were mainly enriched in PI3K-Akt signaling pathway, pathway in cancer, and extracellular matrix-receptor interaction. Seven hub genes (cyclin B2 [CCNB2], TK1, CDC20, PCNA, CKS1B, CDCA5, MCM4) were obtained. Hub genes (CCNB2, CDC20) are highly expressed in OSCC and bladder cancer samples. CCNB2 was one common oncogene of bladder cancer and OSCC.
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  • 文章类型: Journal Article
    背景:细胞外囊泡(EV)介导的细胞间通讯对于缺氧诱导的细胞增殖和组织修复至关重要,但其在内源性心脏再生中的作用尚不清楚。
    目的:在此,我们的目的是确定缺氧诱导的circWhsc1在内皮EV中是否促进心肌细胞(CM)增殖和心脏再生.
    方法:RNA序列数据用于鉴定参与内源性心脏再生的EVcircRNAs。进行定量聚合酶链反应以确定组织中的circRNA表达,细胞和电动汽车。进行了功能增益和功能丧失测定,以探索EV衍生的circWhsc1在心脏再生过程中的功能。使用蛋白质印迹和RNA下拉测定来研究其潜在机制。
    结果:我们发现circWhsc1在新生小鼠心脏中富集,特别是在心脏内皮细胞中,并且在缺氧条件下在EC和EC衍生的EV中进一步上调。当与缺氧预处理的新生儿ECs或其分泌的EV共培养时,新生儿和成人CMs均表现出增加的增殖率和G2/M比,可以通过敲低ECs中的circWhsc1来减弱。在体内,circWhsc1的EC限制性过表达和EV介导的circWhsc1递送诱导的CM增殖,减轻成年小鼠心肌梗死后的心脏纤维化并恢复心脏功能。机制研究表明,EV衍生的circWhsc1通过增强其磷酸化激活TRIM59,从而增强TRIM59与STAT3的结合,磷酸化STAT3并诱导CM增殖。
    结论:目前的研究表明,在EC衍生的EV中,缺氧诱导的circwhsc1诱导CM增殖和心脏再生。由EV衍生的circWhsc1介导的EC-CM通讯可能代表了诱导心肌梗死后心脏修复的前瞻性治疗目标。
    Extracellular vesicles (EVs)-mediated cell-to-cell communication is crucial for hypoxia-induced cell proliferation and tissue repair, but its function in endogenous cardiac regeneration is still unknown.
    Herein, we aimed to determine whether hypoxia-inducible circWhsc1 in endothelial EVs promoted cardiomyocyte (CM) proliferation and cardiac regeneration.
    RNA-sequence data was used to identify EV circRNAs that were involved into endogenous cardiac regeneration. Quantitative polymerase chain reactions were conducted to determine circRNA expression in tissue, cells and EVs. Gain- and loss-of-function assays were performed to explore the function of EV-derived circWhsc1 during cardiac regeneration. Western blotting and RNA pulldown assays were used to investigate its underlying mechanism.
    We found that circWhsc1 was enriched in neonatal mouse hearts, particularly in cardiac ECs, and was further upregulated both in ECs and EC-derived EVs under hypoxic conditions. When cocultured with hypoxia-preconditioned neonatal ECs or their secreted EVs, both neonatal and adult CMs exhibited an increased proliferation rate and G2/M ratio, which could be attenuated by knockdown of circWhsc1 in ECs. In vivo, EC-restricted overexpression of circWhsc1 and EV-mediated delivery of circWhsc1 induced CM proliferation, alleviated cardiac fibrosis and restored cardiac function following myocardial infarction in adult mice. Mechanistic studies revealed that EV-derived circWhsc1 activated TRIM59 by enhancing its phosphorylation, thereby reinforcing the binding of TRIM59 to STAT3, phosphorylating STAT3 and inducing CM proliferation.
    The current study demonstrated that hypoxia-inducible circWhsc1 in EC-derived EVs induces CM proliferation and heart regeneration. EC-CM communication mediated by EV-derived circWhsc1 might represent a prospective therapeutic target for inducing cardiac repair post-myocardial infarction.
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  • 文章类型: Journal Article
    背景:乳腺癌已成为女性恶性肿瘤的主要死亡原因,并日益威胁着全球女性的健康。然而,缺乏治疗基底样BC的有效靶向药物.因此,与早期BC预后相关的生物标志物需要鉴定。
    方法:采用加权基因共表达网络分析方法和Limma软件包,对癌症基因组图谱中87例早期基底样BC和111例正常乳腺组织的RNA-seq数据进行了探索。然后,识别出交叉的基因,和hub基因通过最大集团中心性方法选择。在早期基底样BC中还评估了hub基因的预后效果。
    结果:总计,在这项研究中鉴定了601IG。建立了APPI网络,选择了前10个hub基因,即,细胞周期蛋白B1,细胞周期蛋白A2,细胞周期蛋白依赖性激酶1,细胞分裂周期20,DNA拓扑异构酶IIα,BUB1有丝分裂检查点丝氨酸/苏氨酸激酶,极光激酶B(AURKB),细胞周期蛋白B2,驱动蛋白家族成员11和纺锤体微管的组装因子。仅发现AURKB与早期基底样BC的总体预后显着相关。免疫细胞浸润分析显示CD4+T细胞和初治CD8+T细胞浸润数与AURKB表达水平呈正相关,而原始B细胞和巨噬细胞M2细胞的表达水平与基底样BC中的AURKB表达水平呈负相关。
    结论:AURKB可能是早期基底样BC的潜在预后指标。
    BACKGROUND: Breast cancer (BC) has become the leading cause of death for women\'s malignancies and increasingly threatens the health of women worldwide. However, there is a lack of effective targeted drugs for basal-like BC. Therefore, biomarkers related to the prognosis of early BC need to be identified.
    METHODS: The RNA-seq data of 87 cases of early basal-like BC and 111 cases of normal breast tissue from The Cancer Genome Atlas were explored by the weighted gene co-expression network analysis method and Limma package. Then, intersected genes were identified, and hub genes were selected by the maximal clique centrality method. The prognostic effect of the hub genes was also evaluated in early basal-like BC.
    RESULTS: In total, 601 IGs were identified in this study. An APPI network was constructed, and the top 10 hub genes were selected, namely, cyclin B1, cyclin A2, cyclin-dependent kinase 1, cell division cycle 20, DNA topoisomerase II alpha, BUB1 mitotic checkpoint serine/threonine kinase, aurora kinase B (AURKB), cyclin B2, kinesin family member 11, and assembly factor for spindle microtubules. Only AURKB was found to be significantly associated with the overall prognosis of early basal-like BC. The immune cell infiltration analysis showed that the infiltration numbers of CD4 + T cells and naïve CD8 + T cells were positively correlated with the AURKB expression level, while those of naïve B cells and macrophage M2 cells were negatively correlated with the AURKB expression level in basal-like BC.
    CONCLUSIONS: AURKB might be a potential prognostic indicator in early basal-like BC.
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  • 文章类型: Journal Article
    目的:细胞周期相关蛋白cyclinB1(CCNB1)和cyclinB2(CCNB2)可能参与银屑病的潜在机制。本研究旨在利用生物信息学方法探索这种可能性。
    方法:通过酶联免疫吸附试验评估了14例银屑病患者和5例健康对照者的CCNB1和CCNB2蛋白水平,使用来自四个公开数据集(GSE53552,GSE41664,GSE14905和GSE13355)的数据评估了它们的mRNA水平.比较高和低表达组,以揭示CCNB1-和CCNB2相关的差异表达基因,然后根据基因本体论和京都基因百科全书和基因组途径分析进行评估。CCNB1和CCNB2水平与免疫浸润的相关性分析,以及牛皮癣的典型目标,也表演了。
    结果:总体而言,确定了12种可能与银屑病有关的CCNB1和CCNB2常见免疫相关靶标。这些可以通过多种途径调节细胞周期。此外,发现CCNB1和CCNB2可能通过调节肥大细胞活化和巨噬细胞极化来支持银屑病关键分子靶标的释放。
    结论:这些研究结果表明,CCNB1和CCNB2可能代表银屑病的有价值的分子生物标志物,有助于其发作和进展。
    OBJECTIVE: The cell cycle-related proteins cyclin B1 (CCNB1) and cyclin B2 (CCNB2) are potentially involved in the underlying mechanisms of psoriasis. The present study aimed to explore this possibility using bioinformatics approaches.
    METHODS: CCNB1 and CCNB2 protein levels were evaluated in 14 psoriasis patients and five healthy controls by enzyme-linked immunosorbent assays, and their mRNA levels were evaluated using data from four publicly available datasets (GSE53552, GSE41664, GSE14905, and GSE13355). Comparison of high- and low-expressing groups were performed to reveal CCNB1- and CCNB2-related differentially expressed genes, which were then assessed based on gene ontology and Kyoto Encyclopedia of Genes and Genomes pathway analyses. Correlation analyses between CCNB1 and CCNB2 levels and immune infiltration, as well as typical targets of psoriasis, were also performed.
    RESULTS: Overall, 12 CCNB1 and CCNB2 common immune-related targets potentially involved in psoriasis were identified. These could regulate the cell cycle of through multiple pathways. In addition, CCNB1 and CCNB2 were found to potentially support the release of key molecular targets of psoriasis through the regulation of mast cell activation and macrophage polarization.
    CONCLUSIONS: These findings suggest that CCNB1 and CCNB2 may represent valuable molecular biomarkers of psoriasis, contributing to its onset and progression.
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  • 文章类型: Journal Article
    细胞周期蛋白B2(CCNB2)属于B型细胞周期家族蛋白,它位于染色体15q22上,并与细胞周期蛋白依赖性激酶(CDK)结合以调节其活性。在这项研究中,收集了103个与肺癌(LC)和缺血性脑卒中(CIS)的所有亚型相关的高通量数据集以及CCNB2表达数据。反映表达状态的标准平均差(SMD)和概括接受者工作特征(SROC)的分析表明,LC和CIS中CCNB2的显着上调(肺腺癌:SMD=1.40,95CI[0.98-1.83],SROC=0.92,95CI[0.89-0.94]。肺鳞状细胞癌:SMD=2.56,95CI[1.64-3.48]。SROC=0.97,95CI[0.95-0.98]。肺小细胞癌:SMD=3.01,95CI[2.01-4.01]。SROC=0.98,95CI[0.97-0.99]。CIS:SMD=0.29,95CI[0.05-0.53],SROC=0.68,95CI[0.63-0.71])。同时,蛋白质-蛋白质相互作用(PPI)分析表明,CCNB2是CIS和LC中交叉高表达基因的中心分子。通过多尺度嵌入基因共表达网络分析(MEGENA),获得了包括76个基因的CIS基因模块,CCNB2模块基因的功能富集分析表明,CCNB2可能参与CIS的形成和CIS引起的组织损伤的过程,如“细胞周期,蛋白激酶活性,“和”鞘糖脂生物合成。\"之后,通过单细胞RNA-seq分析,发现CCNB2在脑类器官中的GABA能神经元以及在LUAD中表达增殖分子的T细胞上上调。同时,CCNB2的表达与TOP2A相似,作为细胞增殖的模块标志物在细胞群中分布。这些发现有助于LC相关CIS的发病机制和CIS损伤后的神经元修复。
    Cyclin B2 (CCNB2) belongs to type B cell cycle family protein, which is located on chromosome 15q22, and it binds to cyclin-dependent kinases (CDKs) to regulate their activities. In this study, 103 high-throughput datasets related to all subtypes of lung cancer (LC) and cerebral ischemic stroke (CIS) with the data of CCNB2 expression were collected. The analysis of standard mean deviation (SMD) and summary receiver operating characteristic (SROC) reflecting expression status demonstrated significant up-regulation of CCNB2 in LC and CIS (Lung adenocarcinoma: SMD = 1.40, 95%CI [0.98-1.83], SROC = 0.92, 95%CI [0.89-0.94]. Lung squamous cell carcinoma: SMD = 2.56, 95%CI [1.64-3.48]. SROC = 0.97, 95%CI [0.95-0.98]. Lung small cell carcinoma: SMD = 3.01, 95%CI [2.01-4.01]. SROC = 0.98, 95%CI [0.97-0.99]. CIS: SMD = 0.29, 95%CI [0.05-0.53], SROC = 0.68, 95%CI [0.63-0.71]). Simultaneously, protein-protein interaction (PPI) analysis indicated that CCNB2 is the hub molecule of crossed high-expressed genes in CIS and LC. Through Multiscale embedded gene co-expression network analysis (MEGENA), a gene module of CIS including 76 genes was obtained and function enrichment analysis of the CCNB2 module genes implied that CCNB2 may participate in the processes in the formation of CIS and tissue damage caused by CIS, such as \"cell cycle,\" \"protein kinase activity,\" and \"glycosphingolipid biosynthesis.\" Afterward, via single-cell RNA-seq analysis, CCNB2 was found up-regulated on GABAergic neurons in brain organoids as well as T cells expressing proliferative molecules in LUAD. Concurrently, the expression of CCNB2 distributed similarly to TOP2A as a module marker of cell proliferation in cell cluster. These findings can help in the field of the pathogenesis of LC-related CIS and neuron repair after CIS damage.
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