campylobacteriosis

弯曲杆菌病
  • 文章类型: Journal Article
    目的:弯曲杆菌病,由弯曲杆菌引起。,是世界上最重要的食源性人畜共患疾病之一,也是胃肠炎的常见原因。在欧盟,弯曲杆菌病被认为是最常见的人畜共患疾病,仅2020年就有超过10,000例。这种高发生率凸显了需要更有效的监视方法和识别关键点的需求。
    结果:这里,我们评估并确定了弯曲杆菌属的关键点。2015-2020年西班牙食物链上的事件,基于以下变量:产品,舞台和区域。我们使用机器学习算法(随机森林)分析了西班牙食品安全和营养机构提供的数据集。弯曲杆菌的存在受三个选定的解释变量的影响,特别是产品,其次是地区和阶段。在研究的产品中,肉,尤其是家禽和绵羊,呈现了弯曲杆菌发生的最高概率,细菌最初存在的地方,中间和最后阶段(例如,批发,零售)的食物链。最终阶段的存在可以代表消费者直接暴露于细菌。
    结论:通过使用随机森林方法,这项研究有助于确定西班牙食物链中弯曲杆菌的关键点和控制努力的评估.
    OBJECTIVE: Campylobacteriosis, caused by Campylobacter spp., is one of the most important foodborne zoonotic diseases in the world and a common cause of gastroenteritis. In the European Union, campylobacteriosis is considered the most common zoonotic disease, with over 10,000 cases in 2020 alone. This high occurrence highlights the need of more efficient surveillance methods and identification of key points.
    RESULTS: Herein, we evaluated and identified key points of Campylobacter spp. occurrence along the Spanish food chain during 2015-2020, based on the following variables: product, stage and region. We analysed a dataset provided by the Spanish Agency for Food Safety and Nutrition using a machine learning algorithm (random forests). Campylobacter presence was influenced by the three selected explanatory variables, especially by product, followed by region and stage. Among the studied products, meat, especially poultry and sheep, presented the highest probability of occurrence of Campylobacter, where the bacterium was present in the initial, intermediate and final stages (e.g., wholesale, retail) of the food chain. The presence in final stages may represent direct consumer exposure to the bacteria.
    CONCLUSIONS: By using the random forest method, this study contributes to the identification of Campylobacter key points and the evaluation of control efforts in the Spanish food chain.
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  • 文章类型: Journal Article
    目标:加利西亚自治区通过了关于家禽生产卫生标准的第216/2011号决议,除了西班牙的国家计划。然而,还没有实施根除弯曲杆菌病的计划,共享相同的水库。这项研究的目的是比较沙门氏菌的进化。相对于弯曲杆菌属的分离株。微生物部门收到的粪便样本。
    方法:通过沙门氏菌实验室信息系统(SIL)进行了回顾性描述性比较研究。与弯曲杆菌分离。2011年至2022年在LucusAugusti大学医院(HULA)的粪便中,卢戈,西班牙。
    结果:共分析了35,704份粪便样本,其中3045为阳性。751沙门氏菌属。被隔离。在年度分布中观察到统计学差异(p<0.01),2018年有明显的转折点。五百五个病人需要住院治疗,特别是2014年有72名患者(69%)。另一方面,1,587个弯曲杆菌属。被隔离。在研究期间需要医院护理1,002名患者,2019年达到峰值,有111例(62%)。
    结论:沙门氏菌病病例的减少和弯曲杆菌病病例的维持与DECREE216/2011的实施直接相关。这个,反过来,减轻了HULA卫生区医院的压力。因此,我们相信,ONE健康概念正在研究领域得到加强。
    OBJECTIVE: The Autonomous Community of Galicia has adopted DECREE 216/2011 on health standards for poultry production, in addition to the Spanish national programs. However, no program has yet been implemented to eradicate campylobacteriosis, which shares the same reservoir. The aim of this study was to compare the evolution of Salmonella spp. isolates with respect to those of Campylobacter spp. in faecal samples received by the Microbiology Department.
    METHODS: A retrospective descriptive comparative study was conducted through the Laboratory Information System (SIL) of Salmonella spp. isolated against Campylobacter spp. in faeces between 2011 and 2022 at the Lucus Augusti University Hospital (HULA), Lugo, Spain.
    RESULTS: A total of 35,704 stool samples were analysed, of which 3,045 were positive. 751 Salmonella spp. were isolated. Statistical differences were observed in the annual distribution (p<0.01), with a clear turning point in 2018. Five hundred and five patients required hospital care, especially in 2014 with 72 patients (69%). On the other hand, 1,587 Campylobacter spp. were isolated. Required hospital care 1,002 patients during the study, with a peak in 2019 with 111 cases (62%).
    CONCLUSIONS: The reduction of salmonellosis cases and the maintenance of campylobacteriosis cases are directly related to the implementation of DECREE 216/2011. This, in turn, has reduced the pressure on hospitals in the HULA health area. Therefore, we believe that the ONE Health concept is being strengthened in the area studied.
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  • 文章类型: Journal Article
    作为最常见的食源性疾病,随着2020年COVID-19大流行的开始,德国的弯曲杆菌数量减少。由于食用新鲜鸡肉是人类感染的主要危险因素,这项研究调查了下萨克森州鸡car体弯曲杆菌污染水平与人类病例之间的关系,德国观察了2018年至2021年的新鲜鸡肉消费模式,包括COVID-19大流行的时间。根据中位数和每周使用列联表进行描述性分析,对肉鸡和人类病例中的弯曲杆菌水平进行分类。在COVID-19大流行之前(2018年和2019年),颈部样本和许多人类病例的弯曲杆菌污染水平较高,而随着COVID-19大流行(2020年和2021年)的开始,鸡尸体的污染水平较低,人类病例很少。这两个参数之间的最低一致性显示在2018年(科恩的卡帕系数:0.37)和2020年(0.38)。2021年检查的一致性最高(0.69)。随着2020年COVID-19大流行的开始,下萨克森州的私人新鲜鸡肉消费量大幅增加,与2019年相比增加了63.9吨,平均每周为453.5吨。在COVID-19大流行期间,公共卫生措施和医疗治疗数量的减少无疑对报告较少的人类病例产生了影响。然而,2023年,德国的人类病例数保持在较低水平,而鸡肉消费量增加。因此,关于因食用鸡肉而导致的弯曲性蝶病风险的进一步风险评估应包括原产国,由于欧洲国家对鸡尸体的污染程度不同。
    As the most common foodborne disease, number of campylobacteriosis decreased in Germany with the beginning of the COVID-19 pandemic in 2020. As the consumption of fresh chicken meat is a major risk factor for human infection, this study investigated the relationship between Campylobacter contamination levels on chicken carcasses and human cases in Lower Saxony, Germany and observed fresh chicken meat consumption patterns between 2018 and 2021 including the time of the COVID-19 pandemic. Campylobacter levels in broilers and human cases were classified based on the median and descriptively analysed per week using contingency tables. Before the COVID-19 pandemic (2018 and 2019), high Campylobacter contamination levels on neck samples and many human cases were more present, whereas with the beginning of the COVID-19 pandemic (2020 and 2021), low contamination levels on chicken carcasses and few human cases were more present. Lowest concordance between both parameters was shown in 2018 (Cohen\'s cappa coefficient: 0.37) and 2020 (0.38). The highest concordance was examined in 2021 (0.69). The private consumption of fresh chicken meat in Lower Saxony increased significantly with the beginning of the COVID-19 pandemic in 2020 by 63.9 tonnes compared to 2019 to an average of 453.5 tonnes per week. Public health measures and a reduced number of medical treatments have undoubtedly had an impact on less reported human cases during the COVID-19 pandemic. However, number of human cases remained at a low level in Germany in 2023 while chicken meat consumption increased. Thus, further risk assessments regarding the risk of campyloabcteriosis due to chicken meat consumption should include the country of origin, as the level of contamination of chicken carcasses varies between European countries.
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  • 文章类型: Journal Article
    弯曲杆菌病是由弯曲杆菌引起的一种重要的食源性疾病。它是全球范围内最常见的细菌引起胃肠炎的原因之一,家禽是人类的主要水库和感染源。在家禽养殖场,弯曲菌在鸡的肠道定殖并在加工过程中污染肉。正在开发的针对家禽弯曲菌的疫苗显示出部分或没有针对其盲肠定植的保护作用。因此,这篇综述将详细阐述弯曲杆菌病,并强调针对家禽养殖场弯曲杆菌的控制策略和近期疫苗试验.流行病学,诊断,和治疗弯曲杆菌感染,特别提到了马来西亚的家禽弯曲杆菌污染事件,也将讨论。
    Campylobacteriosis is a significant foodborne illness caused by Campylobacter bacteria. It is one of the most common bacterial causes of gastroenteritis worldwide, with poultry being a major reservoir and source of infection in humans. In poultry farms, Campylobacters colonize the intestinal tract of chickens and contaminate meat during processing. Vaccines under development against Campylobacters in poultry showed partial or no protection against their cecal colonization. Therefore, this review will elaborate on campylobacteriosis and emphasize the control strategies and recent vaccine trials against Campylobacters in poultry farms. The epidemiology, diagnosis, and treatment of Campylobacter infection, along with specific mention of poultry Campylobacter contamination events in Malaysia, will also be discussed.
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  • 文章类型: Journal Article
    弯曲杆菌病是欧盟报道最多的食源性疾病,每年确诊病例超过10万。人类感染可能是由低感染剂量引起的,在脆弱的人群中,食物疾病可以表现为急性和严重的形式。本研究旨在分析2023年在托斯卡纳由空肠弯曲杆菌引起的两例脆弱人群弯曲杆菌病以及当地卫生主管部门的行动。从相关调查结果来看,有可能将这两种食源性疾病都归因于制备/给药过程中不安全的食品管理。鉴于病原体的特殊特征,有必要集中民众的注意力,尤其是那些处理脆弱主题的人,关于在家庭和集体餐饮中应遵循的良好卫生习惯。
    Campylobacteriosis is the most reported foodborne disease in the European Union, with more than 100,000 confirmed cases annually. Human infection can be caused by a low infectious dose, and in fragile populations, the food disease can manifest itself in acute and severe forms. This study aims to analyze two cases of campylobacteriosis in fragile people caused by Campylobacter jejuni in 2023 in Tuscany and the actions of the Local Health Competent Authority. From the results of the related investigations, it was possible to attribute both cases of foodborne diseases to unsafe food management during preparation/administration. Given the peculiar characteristics of the etiological agent, it is necessary to focus the attention of the population, especially those who deal with fragile subjects, on the good hygiene practices to be followed both at home and in collective catering.
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  • 文章类型: Journal Article
    弯曲杆菌感染是全球细菌性腹泻病的主要原因,随着发展中国家和发达国家爆发疫情的报道越来越多。大多数调查菌株基因型和空肠弯曲杆菌流行病学的研究都是在局部范围内进行的。使用存档的七个基因座的多位点序列分型数据,以及来自pubMLST数据库的相关菌株元数据,在这里,我们调查了空肠弯曲杆菌全球种群的时空遗传结构。我们的分析揭示了多个序列类型(STs)在国家和大洲之间克隆扩散的证据。然而,尽管观察到克隆扩散,并且大多数遗传变异是在单个地理亚群中发现的,非克隆校正和克隆校正样本均显示出国家和大陆亚群之间明显的遗传分化证据,与克隆校正的样品相比,非克隆校正的样品显示出更大的分化。系统发育不相容性分析为每个大陆亚群内的重组提供了证据。然而,连锁不平衡分析拒绝了样品间随机重组的假设。暂时,发现多种STs持续了40年,并且在过去的20年中,全球最常见的五种STs显示出相对稳定的频率。我们讨论了我们的结果对粮食安全的影响,疾病传播和公共卫生管理。
    Campylobacter infections are a leading cause of bacterial diarrheal illness worldwide, with increasing reports of outbreaks in both developing and developed countries. Most studies investigating strain genotypes and epidemiology of Campylobacter jejuni examined on a local scale. Using the archived multilocus sequence typing data at seven loci, and associated strain metadata from the PubMLST database, here we investigated the spatial and temporal genetic structure of the global population of C. jejuni. Our analyses revealed evidence for clonal dispersals of multiple sequence types (STs) among countries and continents. However, despite the observed clonal dispersal and that most genetic variations were found within individual geographic subpopulations, both the non-clone-corrected and clone-corrected samples showed evidence of significant genetic differentiation among national and continental subpopulations, with non-clone-corrected samples showing greater differentiation than clone-corrected samples. Phylogenetic incompatibility analyses provided evidence for recombination within each continental subpopulation. However, linkage disequilibrium analyses rejected the hypothesis of random recombination across the samples. Temporally, multiple STs were found to persist across four decades and the five globally most common STs showed relatively stable frequencies over the last two decades. We discussed the implications of our results to food security, disease transmission, and public health management.
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  • 文章类型: Journal Article
    大肠杆菌是全球食源性胃肠炎的重要原因,大多数案件归因于C.jejuni。尽管大多数临床实验室通常不对大肠杆菌进行抗菌药敏试验,耐药菌株的增加强调了这种检测和流行病学监测的必要性。目前的研究提出了221例患者的临床分离特征和人口统计学在以色列北部的大肠杆菌(大肠杆菌和空肠)感染,2015年至2021年。从患者医疗记录中收集临床和人口统计学数据。对红霉素的易感性,四环素,环丙沙星,和庆大霉素使用标准E-试验进行评估。在细菌种类和患者种族之间没有发现显著的相关性,患者性别,或住院时间。相比之下,发现感染物种与患者年龄和年龄亚组之间存在显着差异(P<0.001)。此外,仅在0.5%的研究人群中观察到红霉素耐药,而对环丙沙星的耐药性,四环素,在95%中观察到庆大霉素,93%,和2.3%的人口,分别。该研究强调了对大肠杆菌抗生素耐药性进行常规监测的必要性。
    C.coli is a significant cause of foodborne gastroenteritis worldwide, with the majority of cases attributed to C.jejuni. Although most clinical laboratories do not typically conduct antimicrobial susceptibility testing for C.coli, the rise in resistant strains has underscored the necessity for such testing and epidemiological surveillance. The current study presents clinical isolate characteristics and demographics of 221 patients with C.coli (coli and jejuni) infections in Northern Israel, between 2015 and 2021. Clinical and demographic data were collected from patient medical records. Susceptibility to erythromycin, tetracycline, ciprofloxacin, and gentamicin was assessed using the standard E-test. No significant correlations were found between bacterial species and patient ethnicity, patient gender, or duration of hospitalization. In contrast, significant differences were found between infecting species and patient age and age subgroup (P < 0.001). Furthermore, erythromycin resistance was observed in only 0.5% of the study population, while resistance to ciprofloxacin, tetracycline, and gentamicin was observed in 95%, 93%, and 2.3% of the population, respectively. The presented study underscores the need for routine surveillance of C.coli antibiotic resistance.
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  • 文章类型: Journal Article
    目的:耐抗菌药物(AMR)弯曲杆菌是全球健康威胁,然而,关于低收入和中等收入国家耐药基因组决定因素的信息有限。我们使用一组全基因组测序的空肠弯曲杆菌和伊基托斯大肠杆菌分离株评估了AMR的基因组决定因素,秘鲁。
    方法:对来自两项儿科队列研究的弯曲杆菌分离株进行了测序,这些分离株对环丙沙星和阿奇霉素具有耐药性。
    结果:导致Thr86Ile氨基酸变化的gyrA突变是唯一与氟喹诺酮耐药相关的gyrA突变。存在23SrRNA中的A2075G突变,但未鉴定出先前与大环内酯抗性相关的其他三个23SrRNA突变。在36.1%(35/97)的空肠弯曲杆菌基因组和17.9%(12/67)的大肠杆菌基因组中鉴定了cmeABC外排泵基因型(RE-cmeABC)的抗性增强变体。在CmeR结合位点鉴定的突变,cmeABC启动子区的反向重复序列,增加操纵子的表达,在24/97空肠杆菌和14/67大肠杆菌基因组中鉴定。这些变体的存在,除RE-cmeABC外,在24个空肠杆菌基因组中的18个和14个大肠杆菌基因组中的9个中也注意到。
    结论:两个RE-cmeABC,在空肠弯曲杆菌和大肠杆菌中,CmeR结合位点的突变与MDR表型密切相关。这是秘鲁RE-cmeABC的第一份报告,表明它是在这种情况下对用于治疗人类弯曲杆菌病的主要疗法产生抗药性的主要驱动因素。
    OBJECTIVE: Antimicrobial resistant (AMR) Campylobacter is a global health threat; however, there is limited information on genomic determinants of resistance in low- and middle-income countries. We evaluated genomic determinants of AMR using a collection of whole genome sequenced Campylobacter jejuni and C. coli isolates from Iquitos, Peru.
    METHODS: Campylobacter isolates from two paediatric cohort studies enriched with isolates that demonstrated resistance to ciprofloxacin and azithromycin were sequenced and mined for AMR determinants.
    RESULTS: The gyrA mutation leading to the Thr86Ile amino acid change was the only gyrA mutation associated with fluoroquinolone resistance identified. The A2075G mutation in 23S rRNA was present, but three other 23S rRNA mutations previously associated with macrolide resistance were not identified. A resistant-enhancing variant of the cmeABC efflux pump genotype (RE-cmeABC) was identified in 36.1% (35/97) of C. jejuni genomes and 17.9% (12/67) of C. coli genomes. Mutations identified in the CmeR-binding site, an inverted repeat sequence in the cmeABC promoter region that increases expression of the operon, were identified in 24/97 C. jejuni and 14/67 C. coli genomes. The presence of these variants, in addition to RE-cmeABC, was noted in 18 of the 24 C. jejuni and 9 of the 14 C. coli genomes.
    CONCLUSIONS: Both RE-cmeABC and mutations in the CmeR-binding site were strongly associated with the MDR phenotype in C. jejuni and C. coli. This is the first report of RE-cmeABC in Peru and suggests it is a major driver of resistance to the principal therapies used to treat human campylobacteriosis in this setting.
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  • 文章类型: Editorial
    在本期《生物医学杂志》上,获得了有关小儿弯曲杆菌病的见解,并证明了开发针对肠毒素大肠杆菌的肠胃外疫苗的潜在途径。此外,一项研究表明,使用体外冲击波疗法有助于对抗股骨头坏死。此外,探讨了亲密伴侣暴力与唾液生物标志物之间的关系。最后,阐明了有关自主神经系统失调患者痴呆风险的发现;并揭示了抑郁症患者的非阿尔茨海默病病理生理学模式。
    In this present issue of the Biomedical Journal insights into pediatric campylobacteriosis are granted, and a potential path to developing a parenteral vaccine against enterotoxigenic E. coli is demonstrated. Additionally, a study shows how the use of extracorporeal shockwave therapy contributes to countering osteonecrosis of the femoral head. Furthermore, the relation between intimate partner violence and a saliva biomarker is explored. Finally, findings concerning the risk of dementia in patients with autonomic nervous system dysregulation are elucidated; and patterns of non-Alzheimer disease pathophysiology in individuals with depressive disorder are revealed.
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  • 文章类型: Journal Article
    弯曲杆菌的高发病率和患病率。在食品供应链中,重要的是要了解它们为承受恶劣的环境条件而开发的机制。评估了不同的应激条件和表型方法,以研究具有不同基因型的五种临床空肠弯曲菌分离株的行为。包括对氧气和氧化剂过氧化氢和氢过氧化异丙苯的耐受性,在不同的温度和气氛下,在聚苯乙烯和不锈钢上形成生物膜的运动性和能力。进行全基因组测序以分析这些机制中涉及的216个基因的出现以及相位变异。分离株表现出对氧气和过氧化物胁迫的高耐受性,具有不同的游泳运动性能和生物膜形成能力。Aerotolerance与对过氧化物应力的敏感性降低和运动性的丧失有关,这取决于材料表面,可促进生物膜的形成。比较基因组学没有揭示任何明确的基因模式,尽管观察到宿主感染期间发生的相位变化对于细菌采用的不同存活机制的调节至关重要。这些发现表明,细菌可以以有效的方式结合多种复杂的策略来生存并在环境中持续存在。
    The high incidence and prevalence of Campylobacter spp. in the food supply chain entail the importance to understand their mechanisms developed to withstand harsh environmental conditions encountered. Different stress conditions and phenotypic approaches were evaluated to study the behaviour of five clinical C. jejuni isolates with different genotypes, including the tolerance to oxygen and the oxidants hydrogen peroxide and cumene hydroperoxide, the motility and the ability to form biofilm on polystyrene and stainless steel at different temperatures and atmospheres. Whole Genome Sequencing was performed to analyse the occurrence of 216 genes involved in these mechanisms plus phase variation. The isolates showed high tolerance to oxygen and peroxide stress with different swimming motility performances and biofilm formation abilities. Aerotolerance was related with a reduced sensitive to peroxide stress and a loss of motility that promotes biofilm formation depending on the material surface. Comparative genomics did not reveal any clear gene pattern, although phase variation occurring during host infection was observed to be crucial for the modulation of the different survival mechanisms adopted by the bacteria. These findings reveal that the bacteria can combine diverse and complex strategies in an efficient manner to survive and persist in the environment.
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