antifungal drug resistance

抗真菌药物耐药性
  • 文章类型: Journal Article
    背景:奥杜氏小孢子菌最近又开始流行。皮肤癣菌感染很难治疗,这就提出了一个问题,如果我们用最有效的抗真菌(AF)药物治疗奥杜氏支原体感染。
    目的:本研究的目的是调查丹麦头癣(TC)的暴发,应对疫情管理中的挑战,并对以前的疫情和最低抑制浓度(MIC)进行两次审查。
    方法:我们使用Wood\的光,文化,直接显微镜,和PCR筛选和抗真菌药敏试验(AFST)的治疗优化。我们进行了两次评论,以使用肉汤微量稀释法探索奥杜尼氏分枝杆菌的暴发和MIC值。
    结果:在接受筛选的73个人中,10人确认了奥杜尼氏杆菌感染。在4例(66%)中观察到对灰黄霉素的临床抗性。虽然以前的疫情显示出很高的灰黄霉素疗效,我们的研究支持特比萘芬,氟康唑和伊曲康唑在我们难以治疗的病例中。AFST指导了AF的选择。通过文献检索,我们发现了五起奥杜尼氏杆菌爆发,其中管理的差异包括使用伍德光和预防性局部房颤治疗。来自文献的特比萘芬MIC值范围为0.002至0.125mg/L。
    结论:使用Wood的光照和预防措施对限制感染很重要。文献缺乏灰黄霉素对奥杜尼尼的MIC数据,但表明对特比萘芬敏感。奥杜尼分枝杆菌治疗的临床疗效是矛盾的,有利于特比萘芬和灰黄霉素。AFST可以在疑难病例的治疗中发挥关键作用,但是缺乏AAST和MIC断点的标准化限制了其实用性。
    BACKGROUND: Microsporum audouinii has resurged recently. Infections with the dermatophyte are difficult to treat, which raises the question if we treat M. audouinii infections with the most effective antifungal (AF) agent.
    OBJECTIVE: The aims of this study was to investigate an outbreak of tinea capitis (TC) in Denmark, address the challenges in outbreak management and to conduct two reviews regarding previous outbreaks and minimal inhibitory concentration (MIC).
    METHODS: We used Wood\'s light, culture, direct microscopy, and PCR for screening and antifungal susceptibility testing (AFST) for treatment optimization. We performed two reviews to explore M. audouinii outbreaks and MIC values using broth microdilution method.
    RESULTS: Of 73 screened individuals, 10 had confirmed M. audouinii infections. Clinical resistance to griseofulvin was observed in 4 (66%) cases. While previous outbreaks showed high griseofulvin efficacy, our study favoured terbinafine, fluconazole and itraconazole in our hard-to-treat cases. AFST guided the choice of AF. Through the literature search, we identified five M. audouinii outbreaks, where differences in management included the use of Wood\'s light and prophylactic topical AF therapy. Terbinafine MIC values from the literature ranged from 0.002 to 0.125 mg/L.
    CONCLUSIONS: Use of Wood\'s light and preventive measurements were important for limiting infection. The literature lacked MIC data for griseofulvin against M. audouinii, but indicated sensitivity for terbinafine. The clinical efficacy for M. audouinii treatment was contradictory favouring both terbinafine and griseofulvin. AFST could have a key role in the treatment of difficult cases, but lack of standardisation of AFST and MIC breakpoints limits its usefulness.
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  • 文章类型: Systematic Review
    背景:念珠菌,主要影响危重病人的血流感染,构成了重大的全球健康威胁,特别是随着非白色念珠菌物种的出现,包括耐药菌株。在巴西,获得先进的诊断工具和训练有素的微生物学家的机会有限,妨碍了对念珠菌属物种的准确鉴定和对抗真菌药物的敏感性检测,从而阻碍了监测工作.
    方法:我们在2017年至2023年的出版物中进行了系统评价,涉及巴西念珠菌菌血症患者的念珠菌种类分布和抗真菌药物敏感性。
    结果:尽管最初确定了7075条记录,只有16例符合纳入标准,提供了2305例念珠菌血症的准确信息.主要物种是白色念珠菌,C.近平滑,和热带C,其次是明显的glabratusNakaseomyces。由于16项念珠菌菌血症研究中只有5项能够报告抗真菌药敏试验结果,因此获得诊断试验的机会有限。对棘白菌素的体外抗性很少(只有6/396分离株,1,5%)。在对应方面,氟康唑的耐药率从0到43%不等,考虑到念珠菌的不同研究和物种之间具有很大的异质性。
    结论:我们的综述强调了加强监测和研究工作的迫切需要,以解决巴西念珠菌菌血症和抗真菌耐药性不断变化的情况。尽管有一些限制,现有数据表明,虽然对棘白菌素和两性霉素B的耐药性仍然很少,念珠菌对氟康唑的耐药性日益受到关注.
    BACKGROUND: Candidemia, a bloodstream infection predominantly affecting critically ill patients, poses a significant global health threat especially with the emergence of non-albicans Candida species, including drug-resistant strains. In Brazil, limited access to advanced diagnostic tools and trained microbiologists hampers accurate identification of Candida species and susceptibility to antifungals testing hindering surveillance efforts.
    METHODS: We conducted a systematic review spanning publications from 2017 to 2023 addressing Candida species distribution and antifungal susceptibility among Brazilian patients with candidemia.
    RESULTS: Despite initially identifying 7075 records, only 16 met inclusion criteria providing accurate information of 2305 episodes of candidemia. The predominant species were C. albicans, C. parapsilosis, and C. tropicalis, followed by notable proportions of Nakaseomyces glabratus. Limited access to diagnostic tests was evident as only 5 out of 16 studies on candidemia were able to report antifungal susceptibility testing results. In vitro resistance to echinocandins was rare (only 6/396 isolates, 1,5%). In counterpart, fluconazole exhibited resistance rates ranging from 0 to 43%, with great heterogeneity among different studies and species of Candida considered.
    CONCLUSIONS: Our review underscores the critical need for enhanced surveillance and research efforts to address the evolving landscape of candidemia and antifungal resistance in Brazil. Despite some limitations, available data suggest that while resistance to echinocandins and amphotericin B remains rare, there is a growing concern regarding resistance to fluconazole among Candida species.
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  • 文章类型: Journal Article
    在这项验证研究中,我们比较和对比了显色琼脂培养的性能特征,直接聚合酶链反应(PCR),和肉汤富集,然后进行培养或PCR,以检测耳念珠菌定植。我们发现培养和PCR都提供了优异的性能,与肉汤浓缩提供很少的性能优势,考虑到其成本。
    In this verification study, we compare and contrast the performance characteristics of chromogenic agar culture, direct polymerase chain reaction (PCR), and broth enrichment followed by culture or PCR for the detection of Candida auris colonization. We find that culture and PCR both offer excellent performance, with broth enrichment offering little performance advantage given its cost.
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  • 文章类型: Journal Article
    越来越普遍,并与医疗保健环境相关联,念珠菌感染非常重要,因为该属的某些物种可以产生抗真菌抗性。我们提供流行病学数据,抗真菌药敏,以及非白色念珠菌和非耳念珠菌的遗传多样性影响哥伦比亚一家四级医院的危重患者。九十七株导致侵袭性感染,通过常规方法鉴定超过18个月,被研究过。来自受这些酵母影响的患者的数据,包括性,年龄,合并症,治疗,和结果,进行了分析。确定了分离株的抗真菌敏感性,并对核糖体DNA进行了测序。近带念珠菌,热带念珠菌,光滑念珠菌,都柏林念珠菌,念珠菌和念珠菌引起所有侵袭性念珠菌病的48.5%。该物种主要从血液中回收(50%)。患者多为男性(53.4%),在18天到93岁之间,ICU住院(70.7%)。总死亡率为46.6%,但ICU里的病人,使用抗生素,患有糖尿病,或光滑梭菌感染更有可能死亡。抗性分离株在近融合梭菌中鉴定,C.热带,和C.glabrata.本研究为新兴念珠菌的监测提供了流行病学数据,突出它们的临床影响,以及抗真菌耐药性和克隆扩散的出现。
    Increasingly common and associated with healthcare settings, Candida infections are very important, since some species of this genus can develop antifungal resistance. We contribute data on the epidemiology, antifungal susceptibility, and genetic diversity of Candida non-albicans and non-auris affecting critically ill patients in a fourth-level hospital in Colombia. Ninety-seven isolates causing invasive infections, identified by conventional methods over 18 months, were studied. Data from patients affected by these yeasts, including sex, age, comorbidities, treatment, and outcome, were analysed. The antifungal susceptibility of the isolates was determined, and the ribosomal DNA was sequenced. Candida parapsilosis, Candida tropicalis, Candida glabrata, Candida dubliniensis, and Candida guilliermondii caused 48.5% of all cases of invasive candidiasis. The species were mainly recovered from blood (50%). Patients were mostly men (53.4%), between 18 days and 93 years old, hospitalized in the ICU (70.7%). Overall mortality was 46.6%, but patients in the ICU, using antibiotics, with diabetes mellitus, or with C. glabrata infections were more likely to die. Resistant isolates were identified in C. parapsilosis, C. tropicalis, and C. glabrata. This study provides epidemiological data for the surveillance of emerging Candida species, highlighting their clinical impact, as well as the emergence of antifungal resistance and clonal dispersal.
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  • 文章类型: Journal Article
    双特异性LAMMER激酶在真核生物中高度进化保守,在多种生理过程中起关键作用。比如增长,分化,和应激反应。尽管LAMMER激酶在真菌病原体的致病性和应激反应中的功能已经被表征,它在新生隐球菌中的作用,一种人类真菌病原体和担子菌模型酵母,仍然难以捉摸。在这项研究中,我们鉴定了一个LKH1同源基因,并构建了一个缺失LKH1的菌株和一个互补菌株。类似于其他真菌,lkh1Δ突变体显示出内在的生长缺陷。我们观察到C.neoformansLkh1参与不同的应激反应,包括氧化应激和细胞壁应激。特别是,Lkh1以Rad53依赖性和非依赖性方式调节DNA损伤反应。此外,LKH1的缺失减少了担子孢子的形成。我们的观察表明,Lkh1在用雷帕霉素治疗后变得过度磷酸化,TOR蛋白抑制剂。值得注意的是,LKH1缺失导致黑色素合成和囊膜形成缺陷。此外,我们发现,在系统性隐球菌病鼠模型中,LKH1的缺失导致新衣原体的无毒力。一起来看,Lkh1是应激反应所必需的,性分化,和C.新生动物的毒力。
    Dual-specificity LAMMER kinases are highly evolutionarily conserved in eukaryotes and play pivotal roles in diverse physiological processes, such as growth, differentiation, and stress responses. Although the functions of LAMMER kinase in fungal pathogens in pathogenicity and stress responses have been characterized, its role in Cryptococcus neoformans, a human fungal pathogen and a model yeast of basidiomycetes, remains elusive. In this study, we identified a LKH1 homologous gene and constructed a strain with a deleted LKH1 and a complemented strain. Similar to other fungi, the lkh1Δ mutant showed intrinsic growth defects. We observed that C. neoformans Lkh1 was involved in diverse stress responses, including oxidative stress and cell wall stress. Particularly, Lkh1 regulates DNA damage responses in Rad53-dependent and -independent manners. Furthermore, the absence of LKH1 reduced basidiospore formation. Our observations indicate that Lkh1 becomes hyperphosphorylated upon treatment with rapamycin, a TOR protein inhibitor. Notably, LKH1 deletion led to defects in melanin synthesis and capsule formation. Furthermore, we found that the deletion of LKH1 led to the avirulence of C. neoformans in a systemic cryptococcosis murine model. Taken together, Lkh1 is required for the stress response, sexual differentiation, and virulence of C. neoformans.
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  • 文章类型: Journal Article
    近几十年来,真菌引起的人类爆发的数量有所增加,植物(包括重要的作物品种)和动物。然而,致病物种中出现的抗真菌药物耐药性加剧了这一问题。当真菌暴露于患者或环境中的药物时,耐药性会随着时间的推移而发展。
    先前易感的真菌病原体的新抗性变体正在进化(例如烟曲霉)以及显示抗真菌抗性谱的新出现的真菌物种(例如耳念珠菌和吲哚毛癣菌)。
    这篇综述强调了真菌病原体中出现的抗真菌耐药性及其进化的重要主题,以及这与日益增长的公共卫生负担的关系。
    UNASSIGNED: Over recent decades, the number of outbreaks caused by fungi has increased for humans, plants (including important crop species) and animals. Yet this problem is compounded by emerging antifungal drug resistance in pathogenic species. Resistance develops over time when fungi are exposed to drugs either in the patient or in the environment.
    UNASSIGNED: Novel resistant variants of fungal pathogens that were previously susceptible are evolving (such as Aspergillus fumigatus) as well as newly emerging fungal species that are displaying antifungal resistance profiles (e.g. Candida auris and Trichophyton indotineae).
    UNASSIGNED: This review highlights the important topic of emerging antifungal resistance in fungal pathogens and how it evolved, as well as how this relates to a growing public health burden.
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  • 文章类型: Journal Article
    背景:致病性酵母耳念珠菌的出现引起了全球关注,因为它能够引起医院爆发并对所有抗真菌药物产生耐药性。根据面包师酵母酿酒酵母的公布数据,鞘脂生物合成,这对于维持膜的流动性和脂筏的形成至关重要,可以提供添加剂处理的目标。
    方法:我们分析了C.auris对Myriocin的敏感性,与其他念珠菌相比,它是真核细胞中鞘脂从头合成的抑制剂。此外,在E-试验中,我们将亚致死浓度的肉豆蔻素与抗真菌药物两性霉素B和氟康唑联合使用.因此,在肉汤微量稀释试验中检查了木耳菌素和两性霉素B的联合作用。
    结果:Myriocin介导的对鞘脂生物合成的抑制影响了C.auris的生长。亚致死性肌霉素浓度增加了真菌对两性霉素B的敏感性。表型上对两性霉素B耐药(≥2mg/L)的分离株在存在肌霉素时变得易感。然而,肉豆蔻素的添加对C.auris对氟康唑的敏感性仅有有限的影响。
    结论:我们的结果表明,从头神经鞘脂生物合成的抑制增加了金黄色葡萄球菌对两性霉素B的敏感性。这可能潜在地增强对抗这种经常耐药的酵母病原体的抗真菌治疗选择。
    BACKGROUND: The emergence of the pathogenic yeast Candida auris is of global concern due to its ability to cause hospital outbreaks and develop resistance against all antifungal drug classes. Based on published data for baker\'s yeast Saccharomyces cerevisiae, sphingolipid biosynthesis, which is essential for maintaining membrane fluidity and formation of lipid rafts, could offer a target for additive treatment.
    METHODS: We analysed the susceptibility of C. auris to myriocin, which is an inhibitor of the de novo synthesis of sphingolipids in eukaryotic cells in comparison to other Candida species. In addition, we combined sublethal concentrations of myriocin with the antifungal drugs amphotericin B and fluconazole in E-tests. Consequently, the combinatory effects of myriocin and amphotericin B were examined in broth microdilution assays.
    RESULTS: Myriocin-mediated inhibition of the sphingolipid biosynthesis affected the growth of C. auris. Sublethal myriocin concentrations increased fungal susceptibility to amphotericin B. Isolates which are phenotypically resistant (≥2 mg/L) to amphotericin B became susceptible in presence of myriocin. However, addition of myriocin had only limited effects onto the susceptibility of C. auris against fluconazole.
    CONCLUSIONS: Our results show that inhibition of de novo sphingolipid biosynthesis increases the susceptibility of C. auris to amphotericin B. This may potentially enhance antifungal treatment options fighting this often resistant yeast pathogen.
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  • 文章类型: Journal Article
    由几种念珠菌引起的人类侵袭性真菌感染,在免疫功能低下或危重患者中大大增加,导致大量的发病率和死亡率。白色念珠菌是最普遍的物种,尽管这些生物的频率因地理区域而异。感染白色念珠菌和非白色念珠菌已经变得更加普遍,尤其是在过去的20年里,由于衰老,使用免疫抑制药物,内分泌失调,营养不良,医疗设备的广泛使用,和免疫原性疾病的增加。尽管白色念珠菌是与人类感染最频繁相关的物种,C.光滑,C.近平滑,C.热带,C.krusei也已被确认。几种具有不同作用方式的抗真菌药物被批准用于临床环境中治疗真菌感染。然而,由于人类和真菌的共同真核结构,只有有限数量的抗真菌药物可用于治疗。此外,由于目前可用的抗真菌药物对真菌感染的使用越来越多,念珠菌中的耐药性已经出现。两性霉素B(AmB),多烯类抗真菌药物,主要用于治疗严重的全身性真菌感染。AmB与真菌质膜麦角甾醇相互作用,通过孔形成引发细胞离子泄漏,或从质膜中提取麦角甾醇诱导细胞死亡。AmB抗性主要由麦角甾醇的含量或结构的变化引起。这篇综述总结了念珠菌对抗真菌药物的耐药性。特别关注AmB。
    Invasive fungal infections in humans caused by several Candida species, increased considerably in immunocompromised or critically ill patients, resulting in substantial morbidity and mortality. Candida albicans is the most prevalent species, although the frequency of these organisms varies greatly according to geographic region. Infections with C. albicans and non-albicans Candida species have become more common, especially in the past 20 years, as a result of aging, immunosuppressive medication use, endocrine disorders, malnourishment, extended use of medical equipment, and an increase in immunogenic diseases. Despite C. albicans being the species most frequently associated with human infections, C. glabrata, C. parapsilosis, C. tropicalis, and C. krusei also have been identified. Several antifungal drugs with different modes of action are approved for use in clinical settings to treat fungal infections. However, due to the common eukaryotic structure of humans and fungi, only a limited number of antifungal drugs are available for therapeutic use. Furthermore, drug resistance in Candida species has emerged as a result of the growing use of currently available antifungal drugs against fungal infections. Amphotericin B (AmB), a polyene class of antifungal drugs, is mainly used for the treatment of serious systemic fungal infections. AmB interacts with fungal plasma membrane ergosterol, triggering cellular ion leakage via pore formation, or extracting the ergosterol from the plasma membrane inducing cellular death. AmB resistance is primarily caused by changes in the content or structure of ergosterol. This review summarizes the antifungal drug resistance exhibited by Candida species, with a special focus on AmB.
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  • 文章类型: Journal Article
    Milbemycin肟是大环内酯,具有广泛的抗动物线虫感染活性。已知它们能阻止药物外排,这增加了真菌对唑类的敏感性。我们研究了米尔贝霉素对真菌(烟曲霉,白色念珠菌,耳念珠菌,新生隐球菌,和红色毛癣菌)。为了筛查唑类药物敏感性的变化,在含有1μg/ml米伯霉素的培养基上测试真菌生长。结果表明,米尔贝霉素增加了白色念珠菌耐药菌株的唑类敏感性,C.auris,C.新生主义者,还有T.rubrum.因此,米尔贝霉素可能对抗真菌耐药菌株有用。
    米伯霉素阻断药物外排并增加白色念珠菌耐药菌株的唑类敏感性,耳念珠菌,新生隐球菌,和红色毛癣菌.这种药物有望成为对抗抗真菌药物耐药感染的游戏规则改变者。
    Milbemycin oximes are macrocyclic lactones that have a broad spectrum of activity against nematode infection in animals. They are known to block drug efflux, which increases the susceptibility of fungi to azoles. We investigated the effects of milbemycin on the azole susceptibility of fungi (Aspergillus fumigatus, Candida albicans, C. auris, Cryptococcus neoformans, and Trichophyton rubrum). To screen for changes in azole susceptibility, fungal growth was tested on a culture medium containing 1 μg/ml milbemycin. The results showed that milbemycin increased the azole susceptibility of azole-resistant strains of C. albicans, C. auris, C. neoformans, and T. rubrum. Thus, milbemycin might be useful against antifungal drug-resistant strains.
    Milbemycin blocks drug efflux and increases the azole susceptibility of azole-resistant strains of Candida albicans, C. auris, Cryptococcus neoformans, and Trichophyton rubrum. This drug is expected to be a game changer against antifungal drug-resistant infections.
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  • 文章类型: Journal Article
    基因的过表达经常通过功能获得突变在Nakaseomyces(以前的念珠菌)中出现,基因复制,或者非整倍体,对发病性状和抗真菌药物耐药性有重要影响。这突出了需要开发特定的遗传工具来模拟和研究这种重要的真菌病原体的遗传扩增。这里,我们报告了发展情况,验证,以及第一个成簇的规则间隔短回文重复序列(CRISPR)激活(CRISPRa)系统在光滑奈瑟菌中用于靶向遗传过表达的应用。使用这个系统,我们证明了CRISPRa在光滑奈瑟菌中驱动高水平基因表达的能力,并进一步评估稳健过表达的最佳指导RNA靶向。我们展示了CRISPRa在过表达涉及真菌发病机制和耐药性的基因中的应用,并检测这些关键性状中相应的表型改变。包括新表型的表征。最后,我们使用我们的CRISPRa系统在两个常用的N.glabrata遗传背景中捕获菌株变异。一起,这个工具将扩大我们在这种病原体中功能性遗传过度表达的能力,与未来应用的许多可能性。重要的真菌病原体是一种重要的真菌病原体,现在是念珠菌感染的第二主要原因。该病原体用于抵抗抗真菌治疗的常见策略是通过上调基因表达,但是我们研究这种现象的工具有限。这里,我们发展,优化,并应用CRISPRa作为在光滑奈瑟菌中过表达基因的手段。我们证明了该系统的实用性,以过度表达涉及抗真菌易感性的关键基因,应力耐受性,和生物膜生长。该工具将对我们研究这种重要真菌病原体的生物学能力做出重要贡献。
    The overexpression of genes frequently arises in Nakaseomyces (formerly Candida) glabrata via gain-of-function mutations, gene duplication, or aneuploidies, with important consequences on pathogenesis traits and antifungal drug resistance. This highlights the need to develop specific genetic tools to mimic and study genetic amplification in this important fungal pathogen. Here, we report the development, validation, and applications of the first clustered regularly interspaced short palindromic repeats (CRISPR) activation (CRISPRa) system in N. glabrata for targeted genetic overexpression. Using this system, we demonstrate the ability of CRISPRa to drive high levels of gene expression in N. glabrata, and further assess optimal guide RNA targeting for robust overexpression. We demonstrate the applications of CRISPRa to overexpress genes involved in fungal pathogenesis and drug resistance and detect corresponding phenotypic alterations in these key traits, including the characterization of novel phenotypes. Finally, we capture strain variation using our CRISPRa system in two commonly used N. glabrata genetic backgrounds. Together, this tool will expand our capacity for functional genetic overexpression in this pathogen, with numerous possibilities for future applications.IMPORTANCENakaseomyces (formerly Candida) glabrata is an important fungal pathogen that is now the second leading cause of candidiasis infections. A common strategy that this pathogen employs to resist antifungal treatment is through the upregulation of gene expression, but we have limited tools available to study this phenomenon. Here, we develop, optimize, and apply the use of CRISPRa as a means to overexpress genes in N. glabrata. We demonstrate the utility of this system to overexpress key genes involved in antifungal susceptibility, stress tolerance, and biofilm growth. This tool will be an important contribution to our ability to study the biology of this important fungal pathogen.
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