animal behavior

动物行为
  • 文章类型: Journal Article
    获得独立的研究经验是一个持续的障碍,扼杀了来自生态学不同背景的学生的招聘和保留,进化,和行为生物学。实地经验的好处并不公平地提供给历史上被排斥和缩小的学生。在这篇文章中,我们总结的证据表明,基于课程的本科研究经验(CURE)提供了一种解决方案,以确保公平获得生命科学领域的独立研究经验。我们从自己在生态学中教授CURE的经验中汲取经验,进化,和行为生物学,并为我们在行为生态学(CURE-BxEco)中有效且大部分无材料的CURE提供完整的课程。我们主张更多地获得和综合CURE的好处,以促进教育的包容性。这种创新的教学实践的扩散有利于科学,因为这些课堂方法对于招募和留住历史上被排斥和缩小的学生至关重要,他们在研究中提供了不同的观点。
    Access to independent research experiences is a persistent barrier that stifles the recruitment and retention of students from diverse backgrounds in ecology, evolution, and behavioral biology. The benefits of field experiences are not equitably available to historically excluded and minoritized students. In this article, we summarize evidence that indicates course-based undergraduate research experiences (CUREs) provide a solution to ensure equitable access to independent research experiences in the life sciences. We draw from our own experiences of teaching CUREs in ecology, evolution, and behavioral biology and provide the complete curriculum for our effective and largely materials-free CURE in behavioral ecology (CURE-BxEco). We advocate for greater access to and synthesize the benefits of CUREs to promote inclusivity in education. The proliferation of such innovative pedagogical practices benefits science because these classroom methods are critical in recruiting and retaining historically excluded and minoritized students, who offer diverse perspectives in research.
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  • 文章类型: Journal Article
    分散是重要的生活史性状,在避免近亲繁殖中起着至关重要的作用。发现受威胁物种的扩散模式有助于保护工作。大多数类目是森林居住的陆生鸟类,其传播能力弱,保护重点高。然而,对诸如里夫斯的野鸡Syrmaticusreevesii之类的Galliformes物种的扩散行为和扩散模式知之甚少,中国特有的全球脆弱物种。这里,我们整合了行为和遗传分析,以研究里夫斯野鸡的扩散模式。我们的结果显示,女性和男性都会分散,尽管总体分散模式更可能是男性偏见。里夫斯的野鸡种群遗传多样性水平较低,近亲繁殖水平较低。推测低遗传多样性是由于生境分散造成的,男性偏见的传播可能会减少近亲繁殖的机会。我们的研究表明,性别偏见的传播模式可能是野生动物为避免在零散的栖息地中近亲繁殖而采用的一种行为机制。
    Dispersal is an important life history trait that plays a crucial role in avoiding inbreeding. Uncovering the dispersal pattern of a threatened species facilitates conservation efforts. Most species of Galliformes are forest-dwelling terrestrial birds with a weak dispersal ability and high conservation priorities. However, little is known about the dispersal behavior and dispersal pattern of Galliformes species such as Reeves\'s pheasant Syrmaticus reevesii, a globally vulnerable species endemic to China. Here, we integrated behavioral and genetic analyses to investigate the dispersal pattern of Reeves\'s pheasant. Our results revealed that both females and males would disperse, although the overall dispersal pattern was more likely to be male-biased. Reeves\'s pheasant population had a low level of genetic diversity and a mild level of inbreeding. Speculation low genetic diversity was resulted from fragmented habitat, and male-biased dispersal may reduce the opportunity of inbreeding. Our research indicated that sex-biased dispersal patterns may be a behavioral mechanism adopted by wildlife to avoid inbreeding in a fragmented habitat.
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  • 文章类型: Journal Article
    缺乏统计显著性(即,p>0.05)在比较两个样本的频率检验结果中,通常用作没有差异的证据,或者没有治疗效果,在测量变量上。这样的结论通常是错误的,因为缺乏意义可能仅仅是由于样本量太小而无法揭示效果。得出治疗/病症没有有意义的效果的结论,有必要使用适当的统计方法。对于频率统计,实现这一目标的一个简单工具是两个单边t检验,\'一种等效测试形式,依赖于被认为相关的最小差异的先验定义。换句话说,利益的最小影响大小应事先确定。我们介绍了此测试的原理,并给出了示例,其中可以正确解释经典t检验的结果,假设没有差异。等效测试在探测某些重要结果是否也具有生物学意义方面也非常有用,因为当比较大样本时,可以在等效性检验和双样本t检验中找到显著结果,假设没有差异作为零假设。
    Absence of statistical significance (i.e., p > 0.05) in the results of a frequentist test comparing two samples is often used as evidence of absence of difference, or absence of effect of a treatment, on the measured variable. Such conclusions are often wrong because absence of significance may merely result from a sample size that is too small to reveal an effect. To conclude that there is no meaningful effect of a treatment/condition, it is necessary to use an appropriate statistical approach. For frequentist statistics, a simple tool for this goal is the \'two one-sided t-test,\' a form of equivalence test that relies on the a priori definition of a minimal difference considered to be relevant. In other words, the smallest effect size of interest should be established in advance. We present the principles of this test and give examples where it allows correct interpretation of the results of a classical t-test assuming absence of difference. Equivalence tests are also very useful in probing whether certain significant results are also biologically meaningful, because when comparing large samples it is possible to find significant results in both an equivalence test and in a two-sample t-test, assuming no difference as the null hypothesis.
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  • 文章类型: Journal Article
    动物行为源于神经元的集体动力学,使它容易受到损害。矛盾的是,许多生物即使在大规模神经损伤后也表现出显著的维持行为的能力。这种极端稳健性的分子基础在很大程度上仍然未知。这里,我们开发了一种定量管道来测量全脑再生过程中涡虫行为的持久潜伏状态。通过将>20,000个动物试验与神经网络建模相结合,我们表明,长程体积肽能信号允许涡虫迅速恢复粗糙的行为输出后,大的扰动到神经系统,而小分子神经调质功能的缓慢恢复提高了精度。这依赖于神经肽和小分子传递的不同时间和长度尺度,以产生竞争性调节行为的神经活动的不连贯模式。通过相反的通信机制控制行为可以创建比单独使用更强大的系统,并且可以作为构建强大神经网络的通用方法。
    Animal behavior emerges from collective dynamics of neurons, making it vulnerable to damage. Paradoxically, many organisms exhibit a remarkable ability to maintain significant behavior even after large-scale neural injury. Molecular underpinnings of this extreme robustness remain largely unknown. Here, we develop a quantitative pipeline to measure long-lasting latent states in planarian flatworm behaviors during whole-brain regeneration. By combining >20,000 animal trials with neural network modeling, we show that long-range volumetric peptidergic signals allow the planarian to rapidly restore coarse behavior output after large perturbations to the nervous system, while slow restoration of small-molecule neuromodulator functions refines precision. This relies on the different time and length scales of neuropeptide and small-molecule transmission to generate incoherent patterns of neural activity that competitively regulate behavior. Controlling behavior through opposing communication mechanisms creates a more robust system than either alone and may serve as a generalizable approach for constructing robust neural networks.
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  • 文章类型: Journal Article
    使用心跳变化或加速度计测量放牧动物的能量消耗的间接方法非常方便,因为它们的低成本和低侵入性,允许动物保持其常规。在加速度计的情况下,可以用它们来测量活动,以及对动物行为进行分类,允许他们在其他场景中使用。尽管使用很方便,通过简单的方法评估测量误差和理解测量的有效性是很重要的。在本文中,来自加速度计的数据用于对行为进行分类和测量动物活动,并开发了一种算法来计算绵羊消耗的能量。随后将能量消耗计算的结果与文献中报告的值进行了比较,并且验证了获得的值在参考范围内。尽管它不能用作消耗能量的实际计量,该方法很有前途,因为它可以与其他补充信息来源相结合,如动物体重和摄入时间的演变,从而为动物的饮食管理提供帮助。
    Indirect methods of measuring the energy expenditure of grazing animals using heartbeat variation or accelerometers are very convenient due to their low cost and low intrusiveness, allowing animals to maintain their usual routine. In the case of accelerometers, it is possible to use them to measure activity, as well as to classify animal behavior, allowing their usage in other scenarios. Despite the obvious convenience of use, it is important to evaluate the measurement error and understand the validity of the measurement through a simplistic method. In this paper, data from accelerometers were used to classify behavior and measure animal activity, and an algorithm was developed to calculate the energy expended by sheep. The results of the energy expenditure calculations were subsequently compared with the values reported in the literature, and it was verified that the values obtained were within the reference ranges. Although it cannot be used as a real metering of energy expended, the method is promising, as it can be integrated with other complementary sources of information, such as the evolution of the animal\'s weight and ingestion time, thus providing assistance in animals\' dietary management.
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  • 文章类型: Journal Article
    据推测,所有智能生物最初都具有许多遗传行为模式(IBP),这些行为模式并未针对文明社区中普遍存在的条件进行微调。的确,一些IBP可能与此类条件高度不相容,并且具有诱发自毁的高潜力。这些模式可能包括社会有机体在获取和消耗能量方面寻求对特定物种的权力的反应。所有新兴文明都可能面临与不相容的IBP相关的问题,这可能部分解释了为什么文明显然是罕见的(因为我们在银河系中没有检测到任何其他文明)。
    All intelligent organisms presumably originally have a number of inherited behavior patterns (IBPs) that are not fine-tuned for conditions prevailing in civilized communities. Indeed, some IBPs may be highly incompatible with such conditions and have high potential to induce self-destruction. These patterns may include responses of social organisms seeking power over conspecifics in relation to harvesting and consuming energy. It is possible that all emerging civilizations could face problems associated with incompatible IBPs, which may partially explain why civilizations are apparently rare (since we have not detected any others in our galaxy).
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  • 文章类型: Journal Article
    我们如何捕捉动物运动中行为的广度,从快速的身体抽搐到衰老?使用线虫线虫的高分辨率视频,我们表明,单个动力学将姿态尺度波动与轨迹扩散和更长寿命的行为状态联系起来。我们以短姿势序列作为瞬时行为量度,固定序列长度以实现最大预测。在姿势序列的空间内,我们构建了一个精细的尺度,最大熵分区,以便微状态之间的转换定义高保真马尔可夫模型,我们也将其用作有原则的粗粒度方法。我们使用阻力理论将这些动力学转化为运动,捕获觅食轨迹的统计特性。跨尺度的预测性,我们利用推断的马尔可夫链的最长寿命特征向量来对蠕虫的觅食行为进行自上而下的细分,揭示了“运行和旋转”以及以前未表征的更精细的行为。我们使用我们的模型来研究这些精细行为与觅食成功的相关性,恢复本地和全球搜索策略之间的权衡。
    How do we capture the breadth of behavior in animal movement, from rapid body twitches to aging? Using high-resolution videos of the nematode worm Caenorhabditis elegans, we show that a single dynamics connects posture-scale fluctuations with trajectory diffusion and longer-lived behavioral states. We take short posture sequences as an instantaneous behavioral measure, fixing the sequence length for maximal prediction. Within the space of posture sequences, we construct a fine-scale, maximum entropy partition so that transitions among microstates define a high-fidelity Markov model, which we also use as a means of principled coarse-graining. We translate these dynamics into movement using resistive force theory, capturing the statistical properties of foraging trajectories. Predictive across scales, we leverage the longest-lived eigenvectors of the inferred Markov chain to perform a top-down subdivision of the worm\'s foraging behavior, revealing both \"runs-and-pirouettes\" as well as previously uncharacterized finer-scale behaviors. We use our model to investigate the relevance of these fine-scale behaviors for foraging success, recovering a trade-off between local and global search strategies.
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  • 文章类型: Journal Article
    使用可穿戴传感器跟踪和监测畜牧业中的动物的兴趣一直在稳步增长。这些设备的使用在广泛的牲畜系统中尤为重要,在这些系统中,动物和农民之间的直接互动很少。需要在远距离畜群监测方面做出艰苦的努力。物联网(IoT)技术提供了一种有前途的解决方案,可以解决远距离带来的挑战。实现实时和远程动物监测。在这项研究中,使用定制设计的设备进行了一项实验试验,位于聚氯乙烯(PVC)的情况下,特别适合衣领。此案包含了一个集成的SigFox通信系统,即,低功耗全球定位系统(LP-GPS)全向系统,和电源。审判在位于不同领土区域的两个放牧区进行,指定为案例研究I和II。为每个选定的动物提供了LP-GPS项圈,病例研究I的数据间隔为20分钟,病例研究II的数据间隔为10分钟。然后将获得的数据导入并使用地理信息系统(GIS)软件进行分析。信息是通过专门构建的Web应用程序(AppWeb)收集的。目的是通过开发基于GIS的方法来分析两个被认为是放牧区域内主要由动物占据的领土区域。具体来说,使用诸如Heatmap和内核密度估计(KDE)插件之类的定制算法进行空间分析。通过Heatmap插件获得的地图,显示了放牧区域内动物的时空分布。此外,KDE工具用于对首选领土区域进行分类,为样本中的每个动物生成定制的图表。各个核心领域,通过对每只动物的KDE评估确定,被覆盖以提供对被监测动物的全面分析。应用基于GIS的方法所获得的结果有助于识别动物的位置,并可用于提供对摄食行为和土壤侵蚀的见解,从而有助于预防环境问题。
    Interest in tracking and monitoring animals in livestock farming using wearable sensors has been steadily increasing. The use of these devices is particularly crucial in extensive livestock systems where direct interaction between animals and farmers is infrequent, necessitating strenuous efforts in long-distance herd monitoring. Internet of Things (IoT) technologies offer a promising solution to address the challenges posed by vast distances, enabling real-time and remote animal monitoring. In this study, an experimental trial was conducted using a custom-designed device, located in a Polyvinyl Chloride (PVC) case, specifically tailored to fit onto a collar. This case incorporates an integrated SigFox communication system, i.e., a Low Power Global Positioning System (LP-GPS) omnidirectional system, and a power supply. The trial took place in two grazing areas located in different territorial zones, designated as Case Study I and II. A LP-GPS collar was provided for each selected animal, and the data were recorded at 20-min intervals for Case Study I and 10-min intervals for Case Study II. The acquired data were then imported and analysed using Geographical Information Systems (GIS) software. Information was collected through a purpose-built web application (AppWeb). The objective was to analyze those territorial areas mostly occupied by animals within the two considered grazing areas by developing a GIS-based methodology. Specifically, customized algorithms such as Heatmap and Kernel Density Estimation (KDE) plugins were employed to conduct spatial analyses. The maps obtained through Heatmap plugin, showed the temporal-spatial distribution of animals within their grazing areas. Additionally, the KDE tool was used to classify preferred territorial areas, generating tailored charts for each animal in the sample. The individual Core Areas, determined through KDE evaluation for each animal, were overlaid to provide a comprehensive analysis of the monitored animals.The results achieved applying the GIS-based methodology facilitated the identification of animal positions and could be adopted to provide insights into feeding behavior and soil erosion, thereby aiding in the prevention of environmental issues.
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  • 文章类型: Journal Article
    类固醇激素调节的改变与自闭症谱系障碍(ASD)的病因和进展有关,与酶细胞色素P450家族11亚家族A成员1(CYP11A1)-胆固醇侧链裂解的关键催化剂,在肾上腺中显著表达,卵巢,睾丸,胎盘站在这些调查的最前沿。胎盘Cyp11a1表达异常与由此产生的神经发育障碍之间的潜在联系,以及支撑这种联系的机制,仍未充分划定。在这项研究中,我们采用胎盘滋养层特异性Cyp11a1Hipp11(H11)敲入鼠模型来解剖胎盘和子代内的表型表现,从而阐明了潜在的机械途径。行为分析显示,随着焦虑表型的增强,社交互动能力下降,如开放场和升高加迷宫评估所证明的;补充维生素D3后两种表型均得到改善。电生理测定强调了对成对脉冲促进的增强抑制作用,表明Cyp11a1H11修饰小鼠的神经可塑性受损。注意到孕酮浓度升高,伴随着Th1相关细胞因子(IL-6和TNFα)在血浆中的显着上调,胎盘,和额叶皮质-一种可通过维生素D3干预缓解的病理状态。Western印迹显示维生素D介导的维生素D受体和PGC-1α表达失调的纠正。免疫荧光分析显示小胶质细胞在敲入模型中激活,维生素D3治疗是可逆的。总之,胎盘中Cyp11a1的过度表达概括了小鼠模型中的自闭症样表型,和维生素D3的施用有效地改善了所产生的神经行为和神经炎性紊乱。这项研究证实了Cyp11a1作为生物标志物在产前诊断中的应用,并认为产前补充维生素D3是针对与ASD发病机理相关的类固醇激素代谢扰动的可行预防措施。
    Alterations in steroid hormone regulation have been implicated in the etiology and progression of autism spectrum disorders (ASD), with the enzyme cytochrome P450 family 11 subfamily A member 1 (CYP11A1)-a key catalyst in cholesterol side-chain cleavage, prominently expressed in the adrenal glands, ovaries, testes, and placenta-standing at the forefront of these investigations. The potential link between aberrations in placental Cyp11a1 expression and the resultant neurodevelopmental disorders, along with the mechanisms underpinning such associations, remains inadequately delineated. In this study, we employed a placental trophoblast-specific Cyp11a1 Hipp11 (H11) knock-in murine model to dissect the phenotypic manifestations within the placenta and progeny, thereby elucidating the underlying mechanistic pathways. Behavioral analyses revealed a diminution in social interaction capabilities alongside an augmented anxiety phenotype, as evidenced by open field and elevated plus maze assessments; both phenotypes were ameliorated after vitamin D3 supplementation. Electrophysiological assays underscored the augmented inhibition of paired-pulse facilitation, indicating impaired neuroplasticity in Cyp11a1 H11-modified mice. An elevation in progesterone concentrations was noted, alongside a significant upregulation of Th1-related cytokines (IL-6 and TNFα) across the plasma, placental, and frontal cortex-a pathological state mitigable through vitamin D3 intervention. Western blotting revealed a vitamin D-mediated rectification of vitamin D receptor and PGC-1α expression dysregulations. Immunofluorescence assays revealed microglial activation in the knock-in model, which was reversible upon vitamin D3 treatment. In conclusion, Cyp11a1 overexpression in the placenta recapitulated an autism-like phenotype in murine models, and vitamin D3 administration effectively ameliorated the resultant neurobehavioral and neuroinflammatory derangements. This study substantiates the application of Cyp11a1 as a biomarker in prenatal diagnostics and posits that prenatal vitamin D3 supplementation is a viable prophylactic measure against perturbations in steroid hormone metabolism associated with ASD pathogenesis.
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  • 文章类型: Journal Article
    行为分析是在实际生产中广泛使用的非侵入性工具,因为动物充当生物传感器,能够反映其对某些环境挑战的适应和不适程度。常规统计使用发生数据进行行为评估和幸福感估计,无视事件的时间顺序。广义序列模式(GSP)算法是一种数据挖掘方法,用于识别超过用户指定支持阈值的循环序列,在丰富的环境中,尚未对肉鸡的潜力进行研究。浓缩旨在增加环境复杂性,对动物福利产生有希望的影响,刺激优先行为,并可能减少热应激的有害影响。这里的目的是通过概念证明来验证GSP算法的应用,以识别热应激与丰富环境中肉鸡行为之间的时间相关性。连续48小时自动采集视频图像,分析连续七个小时的时间,从12:00PM到6:00PM,在连续两天的测试中,在舒适和压力温度下饲养在丰富和非丰富环境中的鸡。在舒适的温度下,鸡表现出很高的动机来执行打扮(P)的行为,觅食(F),躺下(Ld),吃(E),和行走(W);序列<{Ld,P}>;<{Ld,F}>;<{P,F,P}>;<{Ld,P,F}>;和<{E,W,F}>是在两种处理中观察到的唯一的。所有其他顺序模式(舒适和压力)是不同的,表明环境富集改变了肉鸡的行为模式。在测试环境中,热应力大大降低了在20%阈值水平下发现的顺序模式。横向躺着“Ll”的行为是肉鸡热应激的强烈指标,仅在非富集环境中频繁出现,这可能表明环境的丰富为动物提供了更好的机会来适应压力引发的挑战,如热。
    Behavior analysis is a widely used non-invasive tool in the practical production routine, as the animal acts as a biosensor capable of reflecting its degree of adaptation and discomfort to some environmental challenge. Conventional statistics use occurrence data for behavioral evaluation and well-being estimation, disregarding the temporal sequence of events. The Generalized Sequential Pattern (GSP) algorithm is a data mining method that identifies recurrent sequences that exceed a user-specified support threshold, the potential of which has not yet been investigated for broiler chickens in enriched environments. Enrichment aims to increase environmental complexity with promising effects on animal welfare, stimulating priority behaviors and potentially reducing the deleterious effects of heat stress. The objective here was to validate the application of the GSP algorithm to identify temporal correlations between heat stress and the behavior of broiler chickens in enriched environments through a proof of concept. Video image collection was carried out automatically for 48 continuous hours, analyzing a continuous period of seven hours, from 12:00 PM to 6:00 PM, during two consecutive days of tests for chickens housed in enriched and non-enriched environments under comfort and stress temperatures. Chickens at the comfort temperature showed high motivation to perform the behaviors of preening (P), foraging (F), lying down (Ld), eating (E), and walking (W); the sequences <{Ld,P}>; <{Ld,F}>; <{P,F,P}>; <{Ld,P,F}>; and <{E,W,F}> were the only ones observed in both treatments. All other sequential patterns (comfort and stress) were distinct, suggesting that environmental enrichment alters the behavioral pattern of broiler chickens. Heat stress drastically reduced the sequential patterns found at the 20% threshold level in the tested environments. The behavior of lying laterally \"Ll\" is a strong indicator of heat stress in broilers and was only frequent in the non-enriched environment, which may suggest that environmental enrichment provides the animal with better opportunities to adapt to stress-inducing challenges, such as heat.
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