Zygosity

合子
  • 文章类型: Journal Article
    评论深入探讨了“分类育儿”和“分类交叉育儿”的含义,“正如N.L.Segal介绍的那样,并将这些概念置于当前研究的框架内。它解决了抚养双胞胎的乐趣和复杂性,强调他们的并发发展阶段如何扩大父母的偏爱,并提高解决每个双胞胎独特需求的挑战。这种相互作用为调查各种育儿实践提供了丰富的背景。此外,这篇论文考虑了双胞胎研究的更广泛的图景,特别是如何照顾单卵双胞胎(谁分享他们的基因的100%)和二卵双胞胎(谁分享他们的基因的50%,平均而言)可能揭示了育儿策略中遗传和环境的交织性质。它还建议双胞胎与其他家庭成员的互动,他们的配偶,同行可以对表型分类隶属现象提供深刻的见解,丰富了我们对亲密关系的理解。
    The commentary delves into the implications of \"assortative parenting\" and \"assortative cross-parenting,\" as introduced by N. L. Segal, and situates these concepts within the framework of current research. It addresses the joys and complexities of raising twins, highlighting how their concurrent development stages can amplify parental favoritism and heighten the challenge of addressing each twin\'s unique needs. This interplay provides a rich context to investigate assortative parenting practices. Additionally, this paper contemplates the broader picture of twin studies, particularly how the care of monozygotic twins (who share 100 % of their genes) and dizygotic twins (who share 50 % of their genes, on average) may reveal the intertwined nature of genetics and environment in parenting strategies. It also proposes that twins\' interactions with other family members, their spouses, and peers can offer profound insights into the phenomena of phenotypic assortative affiliation, enriching our understanding of close relational bonds.
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  • 文章类型: Journal Article
    目的:先前已经描述了对大脑活动的遗传影响,但是早产的数据很少。我们旨在研究遗传影响是否会导致单胎和双胎早产儿之间的振幅整合脑电图(aEEG)信号有所不同。
    方法:这是一项在因斯布鲁克医科大学医院进行的回顾性单中心研究,奥地利。在2010年11月6日至2022年12月6日期间妊娠32周前出生的早产儿符合该研究的条件。分析aEEG的总成熟度评分,它的分量分数和每小时的睡眠-觉醒周期数。
    结果:我们招募了240名早产双胞胎婴儿(男性占57.5%),平均胎龄为30周(范围:24-32周),平均出生体重为1324(范围:600-2116)克。我们比较了240个单例匹配的早产。在早产的单胎和双胎早产儿的总成熟度和分量评分方面没有发现差异。或睡眠-觉醒周期的数量。aEEG显示单卵和二卵双胞胎之间没有差异。
    结论:与单身人士相比,早产的双胎婴儿在出生后的前4周内的aEEG信号没有差异。未来的研究应包括更复杂的非侵入性功能神经成像方法,以更深入地了解这一重要主题。
    Genetic influences on cerebral activity have been described previously, but data are scarce in preterms. We aimed to investigate whether a genetic influence causes amplitude-integrated electroencephalography (aEEG) signals to differ between singletons and twin preterm newborns.
    This was a retrospective single-centre study conducted at Innsbruck Medical University Hospital, Austria. Preterm infants born before 32 weeks of gestation between 6 November 2010 and 6 December 2022 were eligible for the study. The aEEG was analysed for the total maturation score, its component scores and the number of sleep-wake cycles per hour.
    We enrolled 240 preterm twin infants (57.5% male) with a mean gestational age of 30 (range: 24-32) weeks and a mean birth weight of 1324 (range: 600-2116) grams. We compared 240 singleton matched preterms. No differences were found between preterm singletons and twin preterm infants regarding the total maturation and component scores, or the number of sleep-wake cycles. aEEG showed no difference between monozygotic and dizygotic twins.
    Compared to singletons, twin infants born preterm showed no differences in aEEG signals in the first 4 weeks of life. Future studies should include more complex non-invasive functional neuroimaging methods to gain more insight into this important topic.
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  • 文章类型: Journal Article
    基因组拷贝的数量如何改变随机突变的影响仍然知之甚少。在酵母中,研究人员已经研究了这些对敲除或其他大效应突变的影响,但没有说明交配型基因座的差异。我们着手使用一组从先前研究中获得的单倍体酵母中自发产生的突变来比较倍性和/或接合性不同的菌株之间的适应性差异。为了确保没有遗传差异,即使在交配型的位置,我们开始了一系列的转变,首先灭菌,然后暂时引入质粒携带的交配类型。尽管这些尝试使单倍型相等,转化过程中引入的适应度变化淹没了原始突变积累系之间的差异。虽然菌落大小看起来正常,我们观察到我们的转化酵母的最大生长速率是双态的,并确定许多缓慢生长的品系是呼吸缺陷的(“娇小”)。以前没有报道过,我们发现TID1/RDH54敲除的酵母变得娇小的可能性较小。即使是同样娇小的台词,然而,我们发现两次重复转换之间的适合度没有相关性.这些结果对任何使用转化来测量菌株之间遗传差异的适应性效应的研究都提出了挑战。通过试图保持单倍型恒定,我们引入了更多的突变,使我们无法测量遗传状态之间的适应性差异。在这项研究中,我们转化了一百种不同的酵母,使用两个独立的转换,并发现这种常见的实验室程序会对所研究的微生物造成巨大的变化。我们的研究提供了在适应性测定中需要使用多个转化体的警示故事。
    How the number of genome copies modifies the effect of random mutations remains poorly known. In yeast, researchers have investigated these effects for knock-out or other large-effect mutations, but have not accounted for differences at the mating-type locus. We set out to compare fitness differences among strains that differ in ploidy and/or zygosity using a panel of spontaneously arising mutations acquired in haploid yeast from a previous study. To ensure no genetic differences, even at the mating-type locus, we embarked on a series of transformations, which first sterilized and then temporarily introduced plasmid-borne mating types. Despite these attempts to equalize the haplotypes, fitness variation introduced during transformation swamped the differences among the original mutation-accumulation lines. While colony size looked normal, we observed a bi-modality in the maximum growth rate of our transformed yeast and determined that many of the slow growing lines were respiratory deficient (\"petite\"). Not previously reported, we found that yeast that were TID1/RDH54 knockouts were less likely to become petite. Even for lines with the same petite status, however, we found no correlation in fitness between the two replicate transformations performed. These results pose a challenge for any study using transformation to measure the fitness effect of genetic differences among strains. By attempting to hold haplotypes constant, we introduced more mutations that overwhelmed our ability to measure fitness differences between the genetic states. In this study, we transformed over one hundred different lines of yeast, using two independent transformations, and found that this common laboratory procedure can cause large changes to the microbe studied. Our study provides a cautionary tale of the need to use multiple transformants in fitness assays.
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  • 文章类型: Journal Article
    自发性双卵(DZ)双胞胎,即双胞胎在没有使用ART的情况下怀孕,在家庭中运行,其患病率在全球范围内差异很大。相比之下,单卵(MZ)双胞胎在不同的时间和地理区域以恒定的速率发生,除了一些罕见的例外,不要聚集在家庭中。MZ双胞胎的主要假设,当受精卵在发育的植入前阶段分裂时,是随机发生的。我们已经发现了成为DZ双胞胎母亲的第一个系列基因,并表明MZ双胞胎与儿童和成人体细胞组织中稳定的DNA甲基化特征密切相关。因为同卵双胞胎在整个生命周期中都保留着这种分子特征,这一发现为回顾性诊断一个人是否为MZ双胞胎开辟了全新的可能性,该双胞胎可能在妊娠早期消失.这里,我们根据遗传关联研究和荟萃分析总结了DZ双胞胎母亲的基因发现结果,并进一步展示了MZ双胞胎的惊人表观遗传结果。
    Spontaneous dizygotic (DZ) twins, i.e. twins conceived without the use of ARTs, run in families and their prevalence varies widely around the globe. In contrast, monozygotic (MZ) twins occur at a constant rate across time and geographical regions and, with some rare exceptions, do not cluster in families. The leading hypothesis for MZ twins, which arise when a zygote splits during preimplantation stages of development, is random occurrence. We have found the first series of genes underlying the liability of being the mother of DZ twins and have shown that being an MZ twin is strongly associated with a stable DNA methylation signature in child and adult somatic tissues. Because identical twins keep this molecular signature across the lifespan, this discovery opens up completely new possibilities for the retrospective diagnosis of whether a person is an MZ twin whose co-twin may have vanished in the early stages of pregnancy. Here, we summarize the gene finding results for mothers of DZ twins based on genetic association studies followed by meta-analysis, and further present the striking epigenetic results for MZ twins.
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  • 文章类型: Journal Article
    野生葡萄是育种计划中的重要遗传资源,可赋予适应性适应性性状和独特的果实特征,但是这些特征背后的遗传学,以及它们的进化起源,基本上是未知的。为了确定促成葡萄基因组多样化的因素,我们对三个栽培的欧洲(包括PN40024参考基因组)和两个野生北美葡萄基因组进行了全面的基因组内和基因组间分析,包括我们新发布的Vitislabrusca基因组.我们发现栽培葡萄基因组的杂合性是所研究的野生葡萄基因组的两倍。约有30%的拉布鲁斯卡弧菌和48%的霞多丽弧菌基因是杂合或半合子的,并且霞多丽和拉布鲁斯卡弧菌之间的大量共线基因具有不同的基因接合性。我们的研究揭示了支持亲本基因组中基因丢失事件的证据,导致霞多丽基因组中半合子基因的遗传。成千上万的分段重复为基因组特异性基因提供了原始材料,进一步推动所研究基因组的多样化。我们发现了一个最近复制的浓缩,类似功能途径中的适应性基因,但是每个基因组中特定环境的适应性基因的差异保留。例如,在研究的两个野生葡萄基因组中发现了大量NLR基因。我们的发现支持转座因子的变化有助于葡萄的独特性状。我们的工作揭示了基因的接合性,分段重复,基因得失变异,转座因子多态性可能是葡萄树基因组多样化的关键驱动力。
    Wild grapevines are important genetic resources in breeding programs to confer adaptive fitness traits and unique fruit characteristics, but the genetics underlying these traits, and their evolutionary origins, are largely unknown. To determine the factors that contributed to grapevine genome diversification, we performed comprehensive intragenomic and intergenomic analyses with three cultivated European (including the PN40024 reference genome) and two wild North American grapevine genomes, including our newly released Vitis labrusca genome. We found the heterozygosity of the cultivated grapevine genomes was twice as high as the wild grapevine genomes studied. Approximately 30% of V. labrusca and 48% of V. vinifera Chardonnay genes were heterozygous or hemizygous and a considerable number of collinear genes between Chardonnay and V. labrusca had different gene zygosity. Our study revealed evidence that supports gene gain-loss events in parental genomes resulted in the inheritance of hemizygous genes in the Chardonnay genome. Thousands of segmental duplications supplied source material for genome-specific genes, further driving diversification of the genomes studied. We found an enrichment of recently duplicated, adaptive genes in similar functional pathways, but differential retention of environment-specific adaptive genes within each genome. For example, large expansions of NLR genes were discovered in the two wild grapevine genomes studied. Our findings support variation in transposable elements contributed to unique traits in grapevines. Our work revealed gene zygosity, segmental duplications, gene gain-and-loss variations, and transposable element polymorphisms can be key driving forces for grapevine genome diversification.
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  • 文章类型: Journal Article
    背景:脂蛋白脂肪酶(LPL)是甘油三酯水解的限速酶。纯合或复合杂合子LPL变异导致常染色体隐性家族性乳糜微粒血症综合征(FCS),而简单杂合LPL变异体则与高甘油三酯血症(HTG)和HTG相关疾病有关.LPL移码编码序列变体通常会导致受影响的等位基因功能完全丧失,从而允许探索不同水平的LPL功能在人类疾病中的影响。
    方法:对妊娠HTG相关急性胰腺炎(HTG-AP)或HTG-AP患者的LPL的所有外显子和侧翼内含子区域进行Sanger测序。先前报道的LPL移码编码序列变体从人类基因突变数据库和通过PubMed关键词搜索进行整理。手动评估原始报告的以下信息:变体的接合性状态,变体载体的血浆LPL活性,基因分析的疾病,基因分析时患者的年龄,和患者的疾病史。使用SpliceAI来预测整理的变体对剪接的潜在影响。
    结果:确定了两个新的罕见变异体,和53个已知的LPL移码编码序列变体被整理。在提供接合性信息的51种变体中,30个是简单的杂合子,12个是纯合子,9个为复合杂合子。关于其临床和遗传数据对55个变体的仔细评估产生了几个有趣的发现。首先,我们得出的结论是,6-7%的残留LPL功能可以显着延迟FCS的发病年龄,并降低FCS相关综合征的患病率。第二,而绝大多数LPL移码编码序列变异通过其“移码”性质完全破坏基因功能,这些变体中的一小部分可能全部或部分地充当“框架内”变体,导致产生具有一些残余LPL功能的蛋白质产物。第三,我们基于基因型-表型相关性或SpleeAI预测的数据,鉴定了两个可能保留残余功能的LPL移码编码序列变异体.
    结论:本研究报告了两种新的LPL变异体,并对LPL移码编码序列变异体的基因型-表型关系产生了新的见解。
    BACKGROUND: Lipoprotein lipase (LPL) is the rate-limiting enzyme for triglyceride hydrolysis. Homozygous or compound heterozygous LPL variants cause autosomal recessive familial chylomicronemia syndrome (FCS), whereas simple heterozygous LPL variants are associated with hypertriglyceridemia (HTG) and HTG-related disorders. LPL frameshift coding sequence variants usually cause complete functional loss of the affected allele, thereby allowing exploration of the impact of different levels of LPL function in human disease.
    METHODS: All exons and flanking intronic regions of LPL were Sanger sequenced in patients with HTG-related acute pancreatitis (HTG-AP) or HTG-AP in pregnancy. Previously reported LPL frameshift coding sequence variants were collated from the Human Gene Mutation Database and through PubMed keyword searching. Original reports were manually evaluated for the following information: zygosity status of the variant, plasma LPL activity of the variant carrier, disease referred for genetic analysis, patient\'s age at genetic analysis, and patient\'s disease history. SpliceAI was employed to predict the potential impact of collated variants on splicing.
    RESULTS: Two novel rare variants were identified, and 53 known LPL frameshift coding sequence variants were collated. Of the 51 variants informative for zygosity, 30 were simple heterozygotes, 12 were homozygotes, and 9 were compound heterozygotes. Careful evaluation of the 55 variants with respect to their clinical and genetic data generated several interesting findings. First, we conclude that 6-7% residual LPL function could significantly delay the age of onset of FCS and reduce the prevalence of FCS-associated syndromes. Second, whereas a large majority of LPL frameshift coding sequence variants completely disrupt gene function through their \"frameshift\" nature, a small fraction of these variants may act wholly or partly as \"in-frame\" variants, leading to the generation of protein products with some residual LPL function. Third, we identified two candidate LPL frameshift coding sequence variants that may retain residual function based on genotype-phenotype correlation or SpliceAI-predicted data.
    CONCLUSIONS: This study reported two novel LPL variants and yielded new insights into the genotype-phenotype relationship as it pertains to LPL frameshift coding sequence variants.
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  • 文章类型: Journal Article
    背景:病因不明的Villitis(VUE),慢性绒毛膜羊膜炎(CC),慢性蜕膜炎(CD)和慢性组织细胞性颌间炎(CHI)很可能是由母体抗胎儿排斥反应引起的病理性免疫反应的结果.我们分析了双胎妊娠的胎盘,在单卵和双卵病例中表现出这些病变。
    方法:选择我们档案中至少有一个慢性炎性病变的双胎妊娠进行进一步分析,并评估有关接合性(性别,绒毛膜,短串联重复(STR)-分析)。
    结果:该队列包括十六个双胞胎胎盘,单卵5例,二卵11例,分别。VUE(n=4),CC(n=1)和CHI(n=3)在单卵妊娠的两个胎盘中一致表现,并在二卵妊娠的情况下不一致地影响双胞胎胎盘之一。CD(n=10)在两个胎盘中同时出现,在一个胎盘中不一致,并且在三个合子实例中一致,在四个合子实例中不一致。宫内胎儿死亡(n=3),发现早产(n=9)和低出生体重(n=2).在两个具有VUE和CHI不一致表现的合子病例中,发现活产婴儿的胎儿生长不一致。
    结论:VUE的一致表现,单卵中的CC和CHI以及二卵妊娠中炎症的不一致模式表明,针对遗传决定的胎儿抗原的病理免疫机制对于这些实体的发育至关重要。CD的异质性表现可能暗示了可能导致该病变的多种胎儿或母体病因。
    Villitis of unknown etiology (VUE), chronic chorioamnionitis (CC), chronic deciduitis (CD) and chronic histiocytic intervillositis (CHI) are most likely the result of a pathologic immune reaction caused by maternal anti-fetal rejection. We analyzed placentas of twin pregnancies with manifestation of these lesions in monozygotic and dizygotic instances.
    Twin pregnancies from our archive with at least one chronic inflammatory lesion were selected for further analysis and assessed concerning zygosity (gender, chorionicity, short tandem repeat (STR)-analysis).
    The cohort comprised sixteen twin placentas, monozygotic in five cases and dizygotic in 11 cases, respectively. VUE (n = 4), CC (n = 1) and CHI (n = 3) manifested concordantly in both placentas of the monozygotic pregnancies and affected discordantly one of the twin placentas in the dizygotic instances. CD (n = 10) manifested concordantly in two and discordantly in one of the monozygotic placentas, and concordantly in three and discordantly in four of the dizygotic instances. Intrauterine fetal demise (n = 3), preterm birth (n = 9) and low birth weight (n = 2) were recognized. Discordant fetal growth in live born children was recognized in two dizygotic cases with discordant manifestation of VUE and CHI.
    The concordant manifestation of VUE, CC and CHI in monozygotic and the discordant pattern of inflammation in dizygotic pregnancies points to pathologic immune mechanisms against genetically determined fetal antigens being essential for the development of these entities. The heterogenous manifestation of CD could be a hint for diverse fetal or maternal etiologic factors that may contribute to this lesion.
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  • 文章类型: Journal Article
    背景:建立了国家波斯学龄双胞胎注册表,为双胞胎研究提供了平台。在这份报告中,我们描述了定义注册表特征,数据库设计,以及有关注册程序第一阶段收集的数据的初步结果。
    方法:通过焦点小组讨论,定义了设计数据库和数据收集过程所需的数据元素。首先,从教育部的电子数据库中检索了学龄儿童中的双胞胎名单。德黑兰学校被选为我们注册的第一阶段。除了人口统计信息外,父母还填写了标准的“豆豆”问卷和双胞胎相似问卷。数据采用SPSSv.22进行分析。
    结果:第一个全国学龄儿童双胞胎登记处于2018年建立。首先,使用焦点小组讨论定义了所需的数据集和数据收集过程.在国家一级,从教育部的国家数据库中检索了189,738名学生的初始信息。他们出生于2003年至2017年之间,其中男孩94,997(50.1%)和女孩94,741(49.9%)。其中,共有5,642对学龄儿童参加了我们计划的第一阶段。我们的样本量包括9772对双胞胎,906三倍,和92个四胞胎。对接合性问卷的分析表明,有14%的双胞胎被鉴定为单卵双胞胎。
    结论:通过学校卫生助理招募学龄双胞胎会导致高入学率和降低双胞胎注册成本。该研究表明,二卵双胞胎的比例很高,需要在下一阶段的研究中通过双胞胎生物样本进行验证。
    National Persian school-aged twin registry was established to provide a platform for twin studies. In this report, we describe defining registry characteristics, database design, and preliminary results regarding gathered data in the first phase of the registry program.
    Through focus group discussions, the required data elements to design the database and data collection process were defined. First, a list of twins in school-aged groups was retrieved from the electronic database of the Ministry of Education. Tehran schools were selected for the first phase of our registry. Standard \"Pea-in-Pods\" questionnaire and twins\' similarity questionnaires were filled out by the parents themselves in addition to demographic information. Data were analyzed using SPSS v.22.
    The first national school-aged twin registry was established in 2018. Firstly, the required data sets and data collection process were defined using focus group discussions. At the country level, the initial information on 189,738 students was retrieved from the national database of the Ministry of Education. They were born between 2003 and 2017, of which 94,997 are boys (50.1%) and 94,741 are girls (49.9%). Of them, a total of 5,642 pairs of school-aged twins participated in the first phase of our program. Our sample size comprised 9772 twins, 906 triples, and 92 quadruplets. The analysis of the zygosity questionnaire showed that 14% of twin pairs were identified as monozygotic twins.
    Recruiting school-aged twins through school health assistants leads to high enrollment and decreasing costs for the twin registry. The study showed a high rate of dizygotic twins that need to be verified by twin bio-sample in the next phase of studies.
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  • 文章类型: Journal Article
    根据母亲年龄确定双绒毛膜(DC)与单绒毛膜(MC)双胞胎的比例。
    我们回顾了从2009年4月至2012年12月所有进行妊娠早期筛查(FTS)的双胎妊娠,并通过超声检查确定绒毛膜性。病例与新生儿筛查(NBS)结果相关,并根据胎儿性别不一致率估算接合性。计算孕妇年龄的DC与MC胎盘的比率。
    我们确定了11,351例FTS双胎妊娠,并记录了绒毛膜。其中,7,861(64.2%)具有有关FTS和NBS的关联数据,以允许根据新生儿性别估算接合性。其中,MC为1,464(18.6%),DC为6,406(81.4%)。直到40岁,MC双胞胎率保持恒定,而DC双胞胎率随着母亲年龄的增加而增加。在<20y时,55%的双胎妊娠是单卵妊娠(MZ),相比之下,≥40岁时为29%。在MZ双胞胎中,38%的DC在<20y时,而53%的DC在≥40岁时。
    我们的数据表明,接合性和绒毛膜与母亲年龄的关系。DZ孪生随着产妇年龄的增长而增加,而在MZ双胞胎中,DC的比例也随着产妇年龄的增加而增加。
    To determine the ratio of dichorionic (DC) to monochorionic (MC) twins by maternal age.
    We reviewed all twin pregnancies undergoing first trimester screening (FTS) with nuchal translucency from April 2009 to December 2012 with sonographic determination of chorionicity. Cases were linked to newborn screening (NBS) results and zygosity estimated based on rates of fetal sex discordance. The ratio of DC to MC placentation by maternal age was calculated.
    We identified 11,351 twin pregnancies with FTS and documented chorionicity. Among these, 7,861 (64.2%) had linked data on FTS and NBS to allow estimation of zygosity based on neonatal sex. Of these, 1,464 (18.6%) were MC and 6,406 (81.4%) DC. The MC twin rate remained constant while the DC twin rate increased with maternal age until 40y. At < 20y, 55% of twin pregnancies were monozygotic (MZ), as compared to 29% at ≥ 40y. Of MZ twins, 38% were DC at < 20y, while 53% were DC at ≥ 40y.
    Our data suggest a relationship of both zygosity and chorionicity with maternal age. DZ twinning increased with maternal age, while among MZ twins, the proportion that were DC also increased with maternal age.
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  • 文章类型: Journal Article
    The p.D91A is one of the most common ALS-causing SOD1 mutations and is known to be either recessive or dominant. The homozygous phenotype is characterized by prolonged survival and slow progression of disease, whereas the affected heterozygous phenotypes can vary. To date, no genetic protective factors located close to SOD1 have been associated with the mild progressive homozygous phenotype. Using Next Generation Sequencing (NGS), we characterized a small cohort of sporadic and familial p.D91A-SOD1 heterozygous (n = 2) or homozygous (n = 5) ALS patients, to reveal any additional contributing variant in 39 ALS-related genes. We detected unique sets of non-synonymous variants, four of which were of uncertain significance and several in untranslated regions of ALS-related genes. Our results supported an individual oligogenic background underlying both sporadic and familial p.D91A cases irrespective of their p.D91A mutant alleles. We suggest that a comprehensive genomic view of p.D91A-SOD1 ALS patients may be useful in identifying emerging variants and improving disease diagnosis as well as guiding precision medicine.
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