Vibrio parahaemolyticus

副溶血性弧菌
  • 文章类型: Journal Article
    快速准确地检测副溶血性弧菌,这是一种与海鲜污染有关的主要病原体,需要有效对抗食源性疾病和伤口感染。toxR基因在副溶血弧菌中相对保守,并且主要以显著程度的特异性参与毒力基因的表达和调节。这项研究的目的是开发一种快速、简单,临床和非专业实验室环境中副溶血性弧菌的恒温检测方法。
    在这项研究中,使用特异性引物和CRISPRRNA靶向toxR基因,构建将重组酶聚合酶扩增(RPA)与CRISPR-Cas13a相结合的反应系统.采用自制十二烷基硫酸钠(SDS)核酸快速提取试剂提取样品的全基因组DNA,并通过侧流试纸(LFD)对检测结果进行视觉解释。
    RPA-CRISPR/Cas13a-LFD方法的特异性使用副溶血性弧菌菌株ATCC-17802和其他六种非溶血性弧菌物种进行了验证。结果证明了100%的特异性。此外,副溶血性弧菌的基因组DNA被连续稀释和分析,此方法的最低检测限为1拷贝/微升,高于TaqMan-qPCR方法(102拷贝/μL)。所建立的方法成功地应用于检测野生型副溶血性弧菌,结果与TaqMan-qPCR和MALDI-TOFMS质谱鉴定结果一致。最后,将建立的RPA-CRISPR/Cas13a-LFD方法应用于副溶血性弧菌感染小鼠的全血标本,该方法对副溶血性弧菌的检出率与常规PCR方法一致。
    在这项研究中,我们描述了一种RPA-CRISPR/Cas13a检测方法,该方法专门针对toxR基因,并提供了简单性等优点,快速性,高特异性,和视觉解释。该方法是在非专业实验室环境中迅速检测副溶血弧菌的有价值的工具。
    UNASSIGNED: Swift and accurate detection of Vibrio parahaemolyticus, which is a prominent causative pathogen associated with seafood contamination, is required to effectively combat foodborne disease and wound infections. The toxR gene is relatively conserved within V. parahaemolyticus and is primarily involved in the expression and regulation of virulence genes with a notable degree of specificity. The aim of this study was to develop a rapid, simple, and constant temperature detection method for V. parahaemolyticus in clinical and nonspecialized laboratory settings.
    UNASSIGNED: In this study, specific primers and CRISPR RNA were used to target the toxR gene to construct a reaction system that combines recombinase polymerase amplification (RPA) with CRISPR‒Cas13a. The whole-genome DNA of the sample was extracted by self-prepared sodium dodecyl sulphate (SDS) nucleic acid rapid extraction reagent, and visual interpretation of the detection results was performed by lateral flow dipsticks (LFDs).
    UNASSIGNED: The specificity of the RPA-CRISPR/Cas13a-LFD method was validated using V. parahaemolyticus strain ATCC-17802 and six other non-parahaemolytic Vibrio species. The results demonstrated a specificity of 100%. Additionally, the genomic DNA of V. parahaemolyticus was serially diluted and analysed, with a minimum detectable limit of 1 copy/µL for this method, which was greater than that of the TaqMan-qPCR method (102 copies/µL). The established methods were successfully applied to detect wild-type V. parahaemolyticus, yielding results consistent with those of TaqMan-qPCR and MALDI-TOF MS mass spectrometry identification. Finally, the established RPA-CRISPR/Cas13a-LFD method was applied to whole blood specimens from mice infected with V. parahaemolyticus, and the detection rate of V. parahaemolyticus by this method was consistent with that of the conventional PCR method.
    UNASSIGNED: In this study, we describe an RPA-CRISPR/Cas13a detection method that specifically targets the toxR gene and offers advantages such as simplicity, rapidity, high specificity, and visual interpretation. This method serves as a valuable tool for the prompt detection of V. parahaemolyticus in nonspecialized laboratory settings.
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  • 文章类型: Journal Article
    嗜盐病原体副溶血性弧菌的快速增殖对鱼类构成严重的健康危害,并严重阻碍了集约化的海水养殖。本研究旨在评估滑动电弧放电等离子体(GADP)在控制海水养殖中副溶血性弧菌感染中的潜在应用。这项研究调查了GADP对人工海水(ASW)中副溶血性弧菌的灭活能力,经GADP处理的ASW的水质变化,以及GADP对ASW中副溶血性弧菌的可能灭活机制。结果表明,GADP可有效灭活ASW中的副溶血性弧菌。随着ASW体积的增加,GADP灭菌所需的时间也增加了。然而,在20分钟内完成了含有约1.0×104CFU/mL副溶血性弧菌的5000mLASW的完全灭菌。经GADP处理的ASW的水质测试表明,当副溶血性弧菌(1.0×104CFU/mL)完全灭活时,盐度或温度没有显着变化。与大多数研究中在血浆活化水(PAW)中观察到的酸化相反,用GADP处理后,ASW的pH值没有降低。后处理后,GADP处理的ASW中的H2O2浓度降低。后处理后,GADP处理的ASW中的NO2浓度保持不变。进一步分析显示,GADP诱导副溶血性弧菌的氧化应激,增加副溶血弧菌的细胞膜通透性和细胞内ROS水平。这项研究为嗜盐病原体副溶血性弧菌的感染提供了可行的解决方案,并证明了GADP在海水养殖中的潜力。
    The rapid proliferation of the halophilic pathogen Vibrio parahaemolyticus poses a severe health hazard to halobios and significantly impedes intensive mariculture. This study aimed to evaluate the potential application of gliding arc discharge plasma (GADP) to control the infection of Vibrio parahaemolyticus in mariculture. This study investigated the inactivation ability of GADP against Vibrio parahaemolyticus in artificial seawater (ASW), changes in the water quality of GADP-treated ASW, and possible inactivation mechanisms of GADP against Vibrio parahaemolyticus in ASW. The results indicate that GADP effectively inactivated Vibrio parahaemolyticus in ASW. As the volume of ASW increased, the time required for GADP sterilization also increased. However, the complete sterilization of 5000 mL of ASW containing Vibrio parahaemolyticus of approximately 1.0 × 104 CFU/mL was achieved within 20 min. Water quality tests of the GADP-treated ASW demonstrated that there were no significant changes in salinity or temperature when Vibrio parahaemolyticus (1.0 ×104 CFU/mL) was completely inactivated. In contrast to the acidification observed in plasma-activated water (PAW) in most studies, the pH of ASW did not decrease after treatment with GADP. The H2O2 concentration in the GADP-treated ASW decreased after post-treatment. The NO2-concentration in the GADP-treated ASW remained unchanged after post-treatment. Further analysis revealed that GADP induced oxidative stress in Vibrio parahaemolyticus, which increased cell membrane permeability and intracellular ROS levels of Vibrio parahaemolyticus. This study provides a viable solution for infection with the halophilic pathogen Vibrio parahaemolyticus and demonstrates the potential of GADP in mariculture.
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  • 文章类型: Journal Article
    进行这项研究以调查最佳维生素C(VC)水平是否可以增强非特异性免疫反应和抗氧化能力,并降低感染副溶血弧菌后的太平洋白虾(南美白对虾)的死亡率。将六种实验饮食配制成含有六种不同VC水平的0、40、80、120、160和320mg/kg饮食(分别指定为C0、C40、C80、C120、C160和C320)。将虾后幼虫(39.1±0.47mg)随机分配到24个罐中,每个罐40只虾。将四组重复的虾饲喂其中一种饮食43天。VC添加组表现出显著高于C0组的生长性能。饲喂C120日粮的虾比饲喂C0日粮的虾显著提高了饲料利用效率。肝胰腺和g中的VC浓度随着饮食VC水平的增加而显着升高。饲粮VC水平显著上调生长和消化酶相关基因如IGF-1、IGF-BP、淀粉酶,胰蛋白酶和胰凝乳蛋白酶,并上调先天免疫和抗氧化相关基因如酚氧化酶原的表达,Crustin,penaiedin-3a,超氧化物歧化酶,肝胰腺中的谷胱甘肽过氧化物酶和过氧化氢酶。饲喂C80,C120和C160日粮的虾比饲喂C0日粮的虾对副溶血性弧菌的抗性显着提高。通过基于生长的折线回归分析,对虾幼虫的最佳日粮VC水平确定为80.2mg/kg日粮。攻击试验的结果表明,VC水平超过83.0mg/kg饮食可以增强虾对副溶血性弧菌的抗病性。
    This study was conducted to investigate whether optimal vitamin C (VC) levels can enhance non-specific immune response and antioxidant capacity and reduce mortality of Pacific white shrimp (Penaeus vannamei) post-larvae when infected with Vibrio parahaemolyticus. Six experimental diets were formulated to contain six different VC levels of 0, 40, 80, 120, 160 and 320 mg/kg diet (designated as C0, C40, C80, C120, C160 and C320, respectively). Shrimp post-larvae (39.1 ± 0.47 mg) were randomly distributed to 24 tanks with 40 shrimp per tank. Four replicate groups of shrimp were fed one of the diets for 43 days. VC supplemented groups showed significantly higher growth performance than C0 group. Shrimp fed C120 diet had significantly improved feed utilization efficiency than shrimp fed C0 diet. VC concentrations in hepatopancreas and gills were significantly higher with the increase in dietary VC levels. Optimal dietary VC levels significantly upregulated the expressions of growth and digestive enzyme-related genes such as IGF-1, IGF-BP, amylase, trypsin and chymotrypsin, and also upregulated the expressions of innate immunity and antioxidant-related genes such as prophenoloxidase, crustin, penaiedin-3a, superoxide dismutase, glutathione peroxidase and catalase in hepatopancreas. Shrimp fed C80, C120 and C160 diets showed significantly increased resistance to V. parahaemolyticus than shrimp fed C0 diet. The optimum dietary VC level for the shrimp post-larvae was established to be 80.2 mg/kg diet by a broken-line regression analysis based on the growth. The findings from the challenge test indicated that VC levels over 83.0 mg/kg diet could enhance disease resistance of the shrimp against V. parahaemolyticus.
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  • 文章类型: Journal Article
    甘露糖结合凝集素(MBL)是凝集素家族的重要成员,对于调节补体凝集素途径内的功能至关重要。在这项研究中,在脊尾白虾中克隆甘露糖结合凝集素(MBL)基因之后,ExopalaemonCarinicauda,我们研究了其在各种组织中的表达模式及其在应对副溶血性弧菌带来的挑战中的作用。结果表明,MBL基因跨越1342bp,具有972bp的开放阅读框。它编码包含323个氨基酸的蛋白质,预测的相对分子量为36kDa,理论等电点为6.18。该基因在包括眼柄在内的各种组织中表现出表达,心,吉尔,肝胰腺,胃,肠,腹侧神经索,肌肉,和血淋巴,在肝胰腺中检测到最高的表达。在挑战副溶血性弧菌后,RT-PCR分析显示肝胰腺组织中MBL的表达趋势,其特征是最初的增加,然后是随后的减少,在感染后24小时达到峰值。采用RNA干扰来破坏MBL基因表达导致副溶血性弧菌攻击的个体的死亡率显著增加。此外,我们通过构建原核表达载体成功地产生了Pet32a-MBL重组蛋白,用于进行体外细菌抑制试验,这证明了重组蛋白对副溶血性弧菌的抑制作用,为进一步探索其应对副溶血性弧菌挑战的免疫机制奠定基础。
    Mannose-binding lectin (MBL) is a vital member of the lectin family, crucial for mediating functions within the complement lectin pathway. In this study, following the cloning of the mannose-binding lectin (MBL) gene in the ridgetail white prawn, Exopalaemon carinicauda, we examined its expression patterns across various tissues and its role in combating challenges posed by Vibrio parahaemolyticus. The results revealed that the MBL gene spans 1342 bp, featuring an open reading frame of 972 bp. It encodes a protein comprising 323 amino acids, with a predicted relative molecular weight of 36 kDa and a theoretical isoelectric point of 6.18. The gene exhibited expression across various tissues including the eyestalk, heart, gill, hepatopancreas, stomach, intestine, ventral nerve cord, muscle, and hemolymph, with the highest expression detected in the hepatopancreas. Upon challenge with V. parahaemolyticus, RT-PCR analysis revealed a trend of MBL expression in hepatopancreatic tissues, characterized by an initial increase followed by a subsequent decrease, peaking at 24 h post-infection. Employing RNA interference to disrupt MBL gene expression resulted in a significant increase in mortality rates among individuals challenged with V. parahaemolyticus. Furthermore, we successfully generated the Pet32a-MBL recombinant protein through the construction of a prokaryotic expression vector for conducting in vitro bacterial inhibition assays, which demonstrated the inhibitory effect of the recombinant protein on V. parahaemolyticus, laying a foundation for further exploration into its immune mechanism in response to V. parahaemolyticus challenges.
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  • 文章类型: Journal Article
    副溶血性弧菌具有两种不同的VI型分泌系统(T6SS),即T6SS1和T6SS2。T6SS1主要负责与Caco-2和HeLa细胞的粘附以及副溶血性弧菌的抗菌活性,而T6SS2主要参与HeLa细胞的粘附。然而,目前尚不清楚T6SS系统是否在副溶血性弧菌中具有其他生理作用.在这项研究中,我们证明,在低盐条件下,T6SS2的结构基因icmF2的缺失降低了副溶血性弧菌的生物膜形成能力,这也受到孵化时间的影响。尽管如此,icmF2的缺失不影响在海洋样生长条件下的生物膜形成能力,也不影响副溶血性弧菌鞭毛驱动的游泳和成群运动。发现IcmF2促进生物膜基质主要成分的产生,包括细胞外DNA(eDNA)和细胞外蛋白质,和副溶血性弧菌中的环状di-GMP(c-di-GMP)。此外,IcmF2对cpsA的转录有正向影响,mfpA,和一些参与c-di-GMP代谢的基因,包括scrJ,scrL,vopy,tpdA,GEFA,和scrg。相反,scrA的转录受到IcmF2的负面影响。因此,IcmF2依赖性生物膜的形成是通过其对eDNA产生的影响来介导的,胞外蛋白质,和c-di-GMP,以及它对CPSA转录的影响,mfpA,以及与c-di-GMP代谢相关的基因。这项研究证实了IcmF2在促进副溶血性弧菌中生物膜形成和c-di-GMP产生中的新生理作用。
    Vibrio parahaemolyticus possesses two distinct type VI secretion systems (T6SS), namely T6SS1 and T6SS2. T6SS1 is predominantly responsible for adhesion to Caco-2 and HeLa cells and for the antibacterial activity of V. parahaemolyticus, while T6SS2 mainly contributes to HeLa cell adhesion. However, it remains unclear whether the T6SS systems have other physiological roles in V. parahaemolyticus. In this study, we demonstrated that the deletion of icmF2, a structural gene of T6SS2, reduced the biofilm formation capacity of V. parahaemolyticus under low salt conditions, which was also influenced by the incubation time. Nonetheless, the deletion of icmF2 did not affect the biofilm formation capacity in marine-like growth conditions, nor did it impact the flagella-driven swimming and swarming motility of V. parahaemolyticus. IcmF2 was found to promote the production of the main components of the biofilm matrix, including extracellular DNA (eDNA) and extracellular proteins, and cyclic di-GMP (c-di-GMP) in V. parahaemolyticus. Additionally, IcmF2 positively influenced the transcription of cpsA, mfpA, and several genes involved in c-di-GMP metabolism, including scrJ, scrL, vopY, tpdA, gefA, and scrG. Conversely, the transcription of scrA was negatively impacted by IcmF2. Therefore, IcmF2-dependent biofilm formation was mediated through its effects on the production of eDNA, extracellular proteins, and c-di-GMP, as well as its impact on the transcription of cpsA, mfpA, and genes associated with c-di-GMP metabolism. This study confirmed new physiological roles for IcmF2 in promoting biofilm formation and c-di-GMP production in V. parahaemolyticus.
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  • 文章类型: Journal Article
    副溶血性弧菌利用极性鞭毛在液体中游泳,并利用多个侧向鞭毛在表面和粘性环境中成群。VPA0961蛋白是LysR家族转录调节因子,可以调节副溶血性弧菌的游泳和成群运动,但是详细的监管机制尚未完全理解。在这里,我们把蛋白质命名为AcsS,代表游泳和蜂群运动的活化剂。我们的数据提供了证据,表明删除acsS基因可显着降低副溶血性弧菌的游泳和成群运动。此外,发现AcsS激活两种极性(flgA,flgM,flgB,和flgK)和横向(moty,flim,Lafa,和FLID)鞭毛基因。在大肠杆菌中过表达AcsS诱导表达flgA,莫蒂,还有Lafa,但不影响flgB的表达,flgK,flgM,flim,和翻转。有趣的是,His标记的AcsS没有与所有测试基因的上游DNA区域结合,建议间接调控。总之,AcsS通过激活极性和侧向鞭毛基因的转录,正向调节副溶血弧菌的游泳和成群运动。这项工作丰富了我们对副溶血性弧菌双鞭毛系统内基因表达调控的理解。
    Vibrio parahaemolyticus utilizes a polar flagellum for swimming in liquids and employs multiple lateral flagella to swarm on surfaces and in viscous environments. The VPA0961 protein is an LysR family transcriptional regulator that can regulate the swimming and swarming motility of V. parahaemolyticus, but the detailed regulatory mechanisms are not yet fully understood. Herein, we designated the protein as AcsS, which stands for activator of swimming and swarming motility. Our data provided evidence that deleting the acsS gene significantly reduced both swimming and swarming motility of V. parahaemolyticus. Furthermore, AcsS was found to activate the expression of both polar (flgA, flgM, flgB, and flgK) and lateral (motY, fliM, lafA, and fliD) flagellar genes. Overexpression of AcsS in Escherichia coli induced the expression of flgA, motY, and lafA, but did not affect the expression of flgB, flgK, flgM, fliM, and fliD. Interestingly, His-tagged AcsS did not bind to the upstream DNA regions of all the tested genes, suggesting indirect regulation. In conclusion, AcsS positively regulated the swimming and swarming motility of V. parahaemolyticus by activating the transcription of polar and lateral flagellar genes. This work enriched our understanding of the gene expression regulation within the dual flagellar systems of V. parahaemolyticus.
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  • 文章类型: Journal Article
    在虾水产养殖中,可以通过降低病原体的毒力或通过增强虾的免疫力来缓解疾病。Biofloc技术是一种创新的系统,可改善虾的健康和对微生物感染的抵抗力,同时通过有效的营养循环利用为保持养殖水的质量提供了可行的选择。这篇综述旨在证明biofloc系统在增强对虾抗副溶血性弧菌感染的免疫反应和保护过程中的功效,已知可导致急性肝胰腺坏死疾病(AHPND)。大量研究表明,biofloc系统通过提高多个免疫相关基因,例如酚氧化酶原,促进对虾的免疫能力。丝氨酸蛋白酶基因,ras相关的核基因和肽的表达和细胞和体液反应,如充血,酚氧化酶原活性,超氧化物歧化酶活性,吞噬活性;当面临副溶血性弧菌菌株的挑战时,虾的保护和存活得到了增强。此外,使用biofloc系统可以改善水质参数,并可能增强其免疫和整体健康,以有效抵抗疾病;因此,促进虾的生长。本综述表明,biofloc可以作为预防和支持虾养殖中可能的AHPND感染的有效疗法。这种方法展示了可持续虾养殖的潜力,更高的生产率,和改善虾的健康。
    In shrimp aquaculture, disease mitigation may be accomplished by reducing the virulence of the pathogen or by boosting the shrimp\'s immunity. Biofloc technology is an innovative system that improves the health and resistance of shrimp to microbial infections while providing a viable option for maintaining the quality of culture water through efficient nutrient recycling. This review aimed at demonstrating the efficacy of the biofloc system in boosting the immune responses and protective processes of shrimp against Vibrio parahaemolyticus infection, which is known to cause Acute Hepatopancreatic Necrosis Disease (AHPND). Numerous studies have revealed that the biofloc system promotes the immunological capability of shrimp by raising multiple immune -related genes e.g. prophenoloxidase, serine proteinase gene, ras-related nuclear gene and penaeidinexpression and cellular and humoral responses such as hyperaemia, prophenoloxidase activity, superoxide dismutase activity, phagocytic activity; the protection and survival of shrimp when faced with a challenge from the V. parahaemolyticus strain have been enhanced. Furthermore, the use of the biofloc system improves water quality parameters and potentially bolstering their immune and overall health to effectively resist diseases; hence, promotes the growth of shrimp. The present review suggests that biofloc can serve as an effective therapy for both preventing and supporting the management of probable AHPND infection in shrimp culture. This approach exhibits potential for the progress of sustainable shrimp farming, higher productivity, and improved shrimp health.
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  • 文章类型: Journal Article
    副溶血性弧菌(V.副溶血)是一种重要的海产品传播病原体,可引起人类严重的胃肠道疾病。最近,生物传感器在精确检测和跟踪食品中的危险因素方面引起了人们的广泛关注。然而,制造生物传感器时的主要考虑因素是匹配低成本的便携式设备以扩大其应用。在这项研究中,结合了RPA-CRISPR/Cas12a的3D打印集成手持式生物传感器(IHB),横向流条(LFS),并开发了一种用于超灵敏检测副溶血性弧菌的手持设备。利用RPA对副溶血性弧菌tlh基因的预扩增,获得特定的双链体DNA产物以激活CRISPR/Cas12a的反式切割活性,然后用于切割ssDNA探针。然后通过LFS检测ssDNA探针,与tlh基因的RPA扩增产物含量呈负相关。IHB对副溶血性弧菌检测显示出高选择性和优异的灵敏度,检测限为4.9CFU/mL。IHB还证明了在样品中筛选副溶血性弧菌的巨大前景,并有可能用于快速筛选海产品和海洋环境安全的其他病原体风险。
    Vibrio parahaemolyticus (V. parahaemolyticus) is one of the important seafood-borne pathogens that cause a serious gastrointestinal disorder in humans. Recently, biosensors have attracted serious attention for precisely detecting and tracking risk factors in foods. However, a major consideration when fabricating biosensors is to match the low cost of portable devices to broaden its application. In this study, a 3D-printed integrated handheld biosensor (IHB) that combines RPA-CRISPR/Cas12a, a lateral flow strip (LFS), and a handheld device was developed for the ultrasensitive detection of V. parahaemolyticus. Using the preamplification of RPA on tlh gene of V. parahaemolyticus, a specific duplex DNA product was obtained to activate the trans-cleavage activity of CRISPR/Cas12a, which was then utilized to cleave the ssDNA probe. The ssDNA probe was then detected by the LFS, which was negatively correlated with the content of amplified RPA products of the tlh gene. The IHB showed high selectivity and excellent sensitivity for V. parahaemolyticus detection, and the limit of detection was 4.9 CFU/mL. The IHB also demonstrated great promise for the screening of V. parahaemolyticus in samples and had the potential to be applied to the rapid screening of other pathogen risks for seafood and marine environmental safety.
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  • 文章类型: Journal Article
    制备了由堆叠在玻璃纤维滤纸上的银纳米线组成的拉曼散射基底的基于纸的表面增强。同时,DNA嵌入分子EvaGreen被引入作为信号分子用于表面增强拉曼散射(SERS)检测。使用聚合酶链反应(PCR)扩增目标基因,并将该方法开发为快速分子诊断系统。所开发的检测方法的总检测时间为40分钟,包括30分钟的PCR扩增和10分钟的SERS测量。经过30个PCR循环,可以检测到初始浓度为20fg/μL的细菌DNA和初始浓度为7.2×101CFU/mL的细菌悬浮液。当富集培养时间为4h时,在人工污染样品中可以检测到初始污染接种量为1.5CFU/mL的目标细菌。该方法快速、灵敏度高,并且尚未应用于副溶血性弧菌的检测。
    A paper-based surface enhancement of a Raman scattering substrate consisting of silver-nanowires stacked on glass-fiber filter paper was prepared. At the same time, the DNA-embedding molecule Eva Green was introduced as a signaling molecule for surface-enhanced Raman scattering (SERS) detection. Polymerase chain reaction (PCR) was used to amplify target genes and the method was developed into a rapid molecular diagnostic system. The total detection time of the developed detection method was 40 min, including 30 min of PCR amplification and 10 min of SERS measurement. After 30 PCR cycles, bacterial DNA with an initial concentration of 20 fg/μL and a bacterial suspension with an initial concentration of 7.2 × 101 CFUs/mL could be detected. When the enrichment culture time was 4 h, target bacteria with an initial contamination inoculation volume of 1.5 CFUs/mL could be detected in artificially contaminated samples. The method is fast and highly sensitive, and has not been applied to the detection of V. parahaemolyticus.
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  • 文章类型: Journal Article
    副溶血性弧菌可引起急性胃肠炎,伤口感染,和人类的败血症。水产养殖中抗生素的过度使用可能导致多重耐药(MDR)病原体的高发病率。然而,副溶血性弧菌在水生动物中的基因组进化及其抗生素耐受机制仍有待进一步破译。这里,我们使用比较基因组和转录组学分析研究了源自贝类和甲壳类的副溶血弧菌分离株(n=3)的抗生素耐受性的分子基础.确定副溶血性弧菌分离株的基因组序列(5.0-5.3Mb),它们含有4709-5610个预测的蛋白质编码基因,其中823-1099个基因功能未知。比较基因组分析揭示了许多可移动的遗传元件(MGE,n=69),抗生素抗性相关基因(n=7-9),和重金属耐受相关基因(n=2-4)。副溶血弧菌分离株对氨苄青霉素的亚致死浓度(亚LC)具有抗性(AMP,512μg/mL),卡那霉素(KAN,64μg/mL),和链霉素(STR,16μg/mL)(p<0.05)。比较转录组学分析显示,抗生素的亚LC引起的代谢途径显着改变(p<0.05),提示副溶血性弧菌存在多种抗生素耐受策略。这项研究的结果丰富了副溶血性弧菌基因组数据库,应该有助于控制全球的MDR病原体。
    Vibrio parahaemolyticus can cause acute gastroenteritis, wound infections, and septicemia in humans. The overuse of antibiotics in aquaculture may lead to a high incidence of the multidrug-resistant (MDR) pathogen. Nevertheless, the genome evolution of V. parahaemolyticus in aquatic animals and the mechanism of its antibiotic tolerance remain to be further deciphered. Here, we investigated the molecular basis of the antibiotic tolerance of V. parahaemolyticus isolates (n = 3) originated from shellfish and crustaceans using comparative genomic and transcriptomic analyses. The genome sequences of the V. parahaemolyticus isolates were determined (5.0-5.3 Mb), and they contained 4709-5610 predicted protein-encoding genes, of which 823-1099 genes were of unknown functions. Comparative genomic analyses revealed a number of mobile genetic elements (MGEs, n = 69), antibiotic resistance-related genes (n = 7-9), and heavy metal tolerance-related genes (n = 2-4). The V. parahaemolyticus isolates were resistant to sub-lethal concentrations (sub-LCs) of ampicillin (AMP, 512 μg/mL), kanamycin (KAN, 64 μg/mL), and streptomycin (STR, 16 μg/mL) (p < 0.05). Comparative transcriptomic analyses revealed that there were significantly altered metabolic pathways elicited by the sub-LCs of the antibiotics (p < 0.05), suggesting the existence of multiple strategies for antibiotic tolerance in V. parahaemolyticus. The results of this study enriched the V. parahaemolyticus genome database and should be useful for controlling the MDR pathogen worldwide.
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