Urinary tract infections (UTI)

尿路感染 ( UTI )
  • 文章类型: Journal Article
    这项工作旨在产生有关蔓越莓对尿路感染(UTI)的保护作用的潜在机制的新知识。使用在Transwell插入物中生长的Caco-2细胞作为肠屏障模型,我们发现蔓越莓来源的消化液(含有135±5mg酚类化合物/L)相对于对照(ΔTEER=54.5Ωcm2)增加了跨上皮电阻,并减少了约30%的FITC-葡聚糖旁细胞转运,这与紧密连接(TJ)蛋白的基因表达上调有关(即,occludin,小带-1[ZO-1],和claudin-2)(关于claudin-2的对照和occludin和ZO-1的2-3-倍变化)。类似的保护作用,尽管程度较小,当Caco-2细胞先前被尿路致病性大肠杆菌(UPEC)感染时观察到。在包含在Transwell插入物中生长并且未感染或UPEC感染的T24细胞的尿屏障模型中,蔓越莓衍生的酚类代谢物3,4-二羟基苯乙酸(DOPAC)和苯乙酸(PAA)(250μM)的处理也促进了屏障完整性和渗透性的有利变化。在这行,用这些代谢物孵育未感染的T24细胞诱导对claudin-2和ZO-1表达的正调节作用(相对于DOPAC的对照变化~3.5-和~2-倍,相对于PAA的对照变化~1.5-和>2-倍,分别)。总的来说,这些结果表明,蔓越莓多酚对UTI的保护作用可能涉及与尿路上皮和肠上皮的完整性和功能相关的分子机制。
    This work seeks to generate new knowledge about the mechanisms underlying the protective effects of cranberry against urinary tract infections (UTI). Using Caco-2 cells grown in Transwell inserts as an intestinal barrier model, we found that a cranberry-derived digestive fluid (containing 135 ± 5 mg of phenolic compounds/L) increased transepithelial electrical resistance with respect to control (ΔTEER = 54.5 Ω cm2) and decreased FITC-dextran paracellular transport by about 30%, which was related to the upregulation of the gene expression of tight junction (TJ) proteins (i.e., occludin, zonula occludens-1 [ZO-1], and claudin-2) (∼3-4-fold change with respect to control for claudin-2 and ∼2-3-fold for occludin and ZO-1). Similar protective effects, albeit to a lesser extent, were observed when Caco-2 cells were previously infected with uropathogenic Escherichia coli (UPEC). In a urinary barrier model comprising T24 cells grown in Transwell inserts and either noninfected or UPEC-infected, treatments with the cranberry-derived phenolic metabolites 3,4-dihydroxyphenylacetic acid (DOPAC) and phenylacetic acid (PAA) (250 μM) also promoted favorable changes in barrier integrity and permeability. In this line, incubation of noninfected T24 cells with these metabolites induced positive regulatory effects on claudin-2 and ZO-1 expression (∼3.5- and ∼2-fold change with respect to control for DOPAC and ∼1.5- and >2-fold change with respect to control for PAA, respectively). Overall, these results suggest that the protective action of cranberry polyphenols against UTI might involve molecular mechanisms related to the integrity and functionality of the urothelium and intestinal epithelium.
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  • 文章类型: Journal Article
    抗生素耐药性是一个重大的全球公共卫生挑战,特别是尿路感染(UTI),在发展中国家尤为严重。对引起UTI的细菌的抗菌药物敏感性模式的监测对于有效的治疗选择至关重要。这项研究旨在分析从Mughda医学院附属医院患者尿液样本中分离出的细菌中的这些模式,达卡,孟加拉国。
    在Mugdha医学院和医院进行的一项回顾性研究(2019年1月至2020年12月),达卡,检查了尿液培养阳性(≥105CFU/mL)患者的临床和实验室数据。该研究将患者分为四个年龄组:儿童(1-<18岁),年轻人(18-<33岁),中年人(33-50岁),和老年人(>50岁)。使用标准Kirby-Bauer方法评估抗生素对28种常见抗生素的敏感性。
    在社区和医院获得性尿路感染的243例尿液培养中,大肠埃希菌是最常见的尿路病原菌(65.84%),其次是克雷伯菌属。(12.34%),肠球菌属。(8.23%),和其他类型的细菌。
    老年人特别容易受到尿路感染,大肠杆菌是研究区域的主要病原体。观察到的抗生素耐药性模式强调了明智选择抗生素以有效治疗不同年龄段的UTI的必要性。
    UNASSIGNED: Antibiotic resistance presents a significant global public health challenge, particularly for urinary tract infections (UTIs), and is notably severe in developing countries. Surveillance of the antimicrobial susceptibility patterns of UTI-causing bacteria is crucial for effective treatment selection. This study aimed to analyze these patterns in bacteria isolated from the urine samples of patients at Mughda Medical College Hospital, Dhaka, Bangladesh.
    UNASSIGNED: A retrospective study (January 2019 to December 2020) at Mugdha Medical College and Hospital, Dhaka, examined clinical and laboratory data from patients with positive urine cultures (≥105 CFU/mL). The study classified patients into four age groups: children (1-<18 years), young adults (18-<33 years), middle-aged adults (33-50 years), and old adults (>50 years). The standard Kirby-Bauer method was used to assess antibiotic sensitivity to 28 common antibiotics.
    UNASSIGNED: Among 243 positive urine cultures in both community- and hospital-acquired UTIs, Escherichia coli was the most common uropathogen (65.84%), followed by Klebsiella spp. (12.34%), Enterococcus spp. (8.23%), and other types of bacteria.
    UNASSIGNED: Old adults are particularly vulnerable to UTIs, with E. coli being the predominant causative agent in the study region. The observed antimicrobial resistance patterns underscore the necessity of judicious antibiotic selection to effectively treat UTIs across different age groups.
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  • 文章类型: Journal Article
    糖蛋白,其中多糖通常附着在蛋白质上,是一类重要的生物分子,几十年来在临床治疗中广泛用作治疗剂。尿路致病性大肠杆菌(UPEC)O21已被确定为诱导尿路感染的血清群,随着全球妇女和幼儿人数的增加。因此,迫切需要建立针对UPEC感染的保护性疫苗.在这里,我们设计了非致病性大肠杆菌MG1655以实现稳健,针对UPECO21的O21O-抗原多糖基糖蛋白的经济有效的从头生物合成。具体来说,该糖工程大肠杆菌MG1655被操作用于高效葡萄糖-甘油共利用以及基因簇安装和O-糖基化机器组装。UDP-糖前体的关键途径也得到了加强,以迫使更多的碳通量流向糖基供体,将糖蛋白滴度提高了5.6倍。进一步优化培养条件可产生高达35.34mg/L的糖蛋白。糖肽MS证实了糖蛋白的精确生物合成。该糖蛋白引发抗原特异性IgG免疫应答并显著减少肾脏和膀胱定植。这种基于细菌细胞的糖平台和优化策略可以为其他增值糖蛋白的生物合成提供指导。
    Glycoproteins, in which polysaccharides are usually attached to proteins, are an important class of biomolecules that are widely used as therapeutic agents in clinical treatments for decades. Uropathogenic Escherichia coli (UPEC) O21 has been identified as a serogroup that induces urinary tract infections, with a global increasing number among women and young children. Therefore, there is an urgent need to establish protective vaccines against UPEC infection. Herein, we engineered non-pathogenic E. coli MG1655 to achieve robust, cost-effective de novo biosynthesis of O21 O-antigen polysaccharide-based glycoprotein against UPEC O21. Specifically, this glycoengineered E. coli MG1655 was manipulated for high-efficient glucose-glycerol co-utilization and for the gene cluster installation and O-glycosylation machinery assembly. The key pathways of UDP-sugar precursors were also strengthened to enforce more carbon flux towards the glycosyl donors, which enhanced the glycoprotein titer by 5.6-fold. Further optimization of culture conditions yielded glycoproteins of up to 35.34 mg/L. Glycopeptide MS confirmed the preciset biosynthesis of glycoprotein. This glycoprotein elicited antigen-specific IgG immune responses and significantly reduced kidney and bladder colonization. This bacterial cell-based glyco-platform and optimized strategies can provide a guideline for the biosynthesis of other value-added glycoproteins.
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  • 文章类型: Journal Article
    背景:尿路感染(UTI)是尿路疾病的一种流行形式,影响所有年龄和性别的个体。在沙特阿拉伯王国(KSA),尿路感染是医疗保健系统的重大负担,占所有感染的10%,是急诊科入院的第二大原因。尽管如此,在沙特阿拉伯进行了有限的研究,尤其是在Jazan省,位于西南地区。方法:回顾性分析,横断面研究纳入了2022年1月至2023年3月期间在Jazan一家三级医院寻求治疗的尿培养阳性个体.使用标准化的数据收集表格从微生物实验室测试结果和患者的电子病历中检索相关信息。变量,如性别,尿样采集日期,细菌分离物,抗生素敏感性,和耐药性是使用数据收集表收集的。数据采用SPSS软件进行分析,版本23.0(IBMCorp.,Armonk,NY,美国)。结果:共分离鉴定1082例尿液细菌。女性占细菌感染的比例(62.66%)高于男性(37.34%)。革兰氏阴性菌占所有分离菌株的94%。与UTI相关的最常见病原体是大肠杆菌(47.97%),肺炎克雷伯菌(24.58%),铜绿假单胞菌(11.55%)。抗菌素耐药模式表明存在超广谱β-内酰胺酶(ESBL)(30.13%),耐碳青霉烯酶肠杆菌(CRE)(1.94%),耐甲氧西林金黄色葡萄球菌(MRSA)(0.74%),耐万古霉素肠球菌(VRE)(0.18%)。与2022年的其他月份相比,9月份的UTI发病率更高(13%)。大肠杆菌,肺炎克雷伯菌,铜绿假单胞菌是主要的革兰氏阴性多药耐药菌(MDRO),占34.42%,13.95%,和1.63%的人口。结论:耐药微生物引起的UTI在Jazan中的患病率显着。与其他地区的调查结果一致,大肠杆菌仍然是尿路感染最常见的病原体,显示出值得关注的季节性模式。大约35%的报告病例涉及MDRO,ESBLs占30%。这些结果应该引起医疗官员的关注,强调有必要进一步调查导致在Jazan传播MDRO的因素。
    Background: Urinary tract infections (UTIs) are a prevalent form of urinary tract diseases affecting individuals of all ages and genders. In the Kingdom of Saudi Arabia (KSA), UTIs are a significant burden on the healthcare system, comprising 10% of all infections and ranking as the second leading cause of emergency department admissions. Despite this, limited research has been conducted in Saudi Arabia, particularly in Jazan Province, located in the southwestern region. Methods: This retrospective, cross-sectional study encompassed individuals with positive urine cultures who sought care at a tertiary hospital in Jazan between January 2022 and March 2023. A standardized data collection form was utilized to retrieve relevant information from microbiology lab test results and patients\' electronic medical records. Variables such as sex, urine sample collection date, bacterial isolates, antibiotic sensitivity, and resistance were collected using the data collection form. Data were analyzed using SPSS software, version 23.0 (IBM Corp., Armonk, NY, USA). Results: A total of 1082 urinary bacterial samples were isolated and identified. Females accounted for more bacterial infections (62.66%) than males (37.34%). Gram-negative bacteria represented 94% of all isolated strains. The most prevalent pathogens associated with UTIs were Escherichia coli (47.97%), Klebsiella pneumoniae (24.58%), and Pseudomonas aeruginosa (11.55%). Antimicrobial resistance patterns indicated the presence of extended-spectrum beta-lactamase (ESBL) (30.13%), carbapenemase-resistant Enterobacter (CRE) (1.94%), methicillin-resistant Staphylococcus aureus (MRSA) (0.74%), and vancomycin-resistant Enterococci (VRE) (0.18%). UTI incidence demonstrated a higher prevalence in September (13%) compared to other months in 2022. Escherichia coli, Klebsiella pneumoniae, and Pseudomonas aeruginosa were the predominant Gram-negative multidrug-resistant organisms (MDRO), accounting for 34.42%, 13.95%, and 1.63% of the population. Conclusions: The prevalence of UTIs caused by antibiotic-resistant microbes is notable in Jazan. Consistent with findings from other regions, Escherichia coli remains the most common causative pathogen of UTIs, displaying a seasonal pattern that warrants attention. Approximately 35% of reported cases involve MDRO, with ESBLs accounting for 30%. These results should raise concerns among healthcare officials, highlighting the necessity for further investigations into factors contributing to the circulation of MDRO in Jazan.
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  • 文章类型: Journal Article
    背景:本研究评估了噬菌体治疗大鼠尿路感染(UTI)的疗效。方法:通过在不同组大鼠中通过套管以每个尿道1.5×108CFU/ml的浓度接种大肠杆菌(100μl)来建立UTI。为了治疗,以1×108PFU/ml的不同浓度施用噬菌体混合物(200μl),1×107PFU/ml和1×106PFU/ml。结果:前两种浓度的两种剂量的噬菌体混合物导致UTI的治愈。然而,最低浓度的噬菌体混合物需要更多的剂量来根除致病菌.结论:数量,可以使用尿道途径在啮齿动物模型中优化剂量的频率和安全性。
    抗菌素耐药性主要是由抗生素的过度使用和误用引起的,这导致抗生素治疗感染的能力下降。尿路感染(UTI)很常见,但很难治疗。因为它们通常是由耐多药细菌引起的。大肠杆菌是UTI的常见原因。噬菌体是治疗细菌感染的潜在可行替代方法,尽管使用噬菌体作为抗菌疗法有很多好处,令人惊讶的是,很少有基于临床试验的原创研究文章,特别是针对UTI。在这项研究中,定制的噬菌体鸡尾酒治疗UTI的效率,不同的剂量直接给大鼠的膀胱,进行了评估。在较高浓度下,在两个剂量的噬菌体混合物后,UTI被完全根除。然而,在较低的浓度下,需要额外的剂量来根除感染.噬菌体疗法似乎具有治疗潜力,这项研究表明了在适当浓度下剂量的潜在频率。噬菌体治疗既有效又安全。
    Background: The present study evaluates the efficacy of bacteriophage therapy for urinary tract infection (UTI) in rats. Methods: UTI was established by inoculating Escherichia coli (100 μl) at a concentration of 1.5 × 108 CFU/ml per urethra via a cannula in different groups of rats. For treatment, phage cocktails (200 μl) were administered at varying concentrations of 1 × 108 PFU/ml, 1 × 107 PFU/ml and 1 × 106 PFU/ml. Results: The two doses of phage cocktail at the first two concentrations resulted in the cure of UTI. However, the lowest concentration of the phage cocktail warranted more doses to eradicate the causative bacteria. Conclusion: The quantity, frequency and safety of doses could be optimized in a rodent model using the urethral route.
    Antimicrobial resistance is primarily caused by antibiotic overuse and misuse, which results in a decline in the ability of antibiotics to treat infections. Urinary tract infections (UTIs) are common but difficult to treat, as they are frequently caused by multidrug-resistant bacteria. Escherichia coli is a common cause of UTIs. Bacteriophages are a potentially viable alternative for the treatment of bacterial infections, and despite the numerous benefits of using phages as antibacterial therapeutics, there are surprisingly few original research articles based on clinical trials, specifically against UTIs. In this study, the efficiency of a customized bacteriophage cocktail for the treatment of UTIs, with varied doses administered directly into the urinary bladder of rats, was evaluated. At higher concentrations, UTIs were completely eradicated after two doses of the bacteriophage cocktail. However, at lower concentrations, additional doses were required to eradicate the infection. Phage therapy appears to have therapeutic potential, and this study indicates the potential frequency of dosages at appropriate concentrations. Phage therapy was both effective and safe.
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  • 文章类型: Journal Article
    尿路感染(UTI)是儿童时期常见的细菌感染。考虑到益生菌在胃肠道领域的已知有益作用,他们还可以帮助缓解UTI。在我们的临床试点研究中,我们试图验证特定益生菌菌株对儿童UTI病程和预防的积极作用.30名患有UTI的儿童被纳入,并以双盲的方式依次分为两组(安慰剂/对照和益生菌/测试),随机化,安慰剂对照临床试点研究。我们选择了来自当地斯洛文尼亚奶酪的植物乳杆菌PCS26(Lp26),对大肠杆菌(E.大肠杆菌)。在UTI急性期和服用益生菌或安慰剂补充剂6个月后,遵循几个参数来寻找两组之间的差异。我们的结果显示两组之间没有统计学上的显著差异;然而,安慰剂组的两名儿童在随访期后6个月内出现高热UTI复发,而益生菌组没有UTI复发。在测试组中,使用益生菌开始抗生素后的发热天数较短,虽然没有达到统计学意义(p=0.084)。根据我们的结果,益生菌可能有助于缓解UTI症状和预防UTI。有必要进行更大样本量的进一步研究。此外,应进行选择适当的益生菌免疫菌株的基础科学研究。
    Urinary tract infections (UTI) are frequent bacterial infections in childhood. Considering the known beneficial effects of probiotics in the gastrointestinal field, they could also help to alleviate UTIs. In our clinical pilot study, we sought to verify the positive effects of the specific probiotic strain on the course and prevention of UTI in children. Thirty children with UTIs were enrolled and sequentially sampled into two groups (placebo/control and probiotic/test) in a double-blind, randomized, placebo-controlled clinical pilot study. We chose Lactobacillus plantarum PCS 26 (Lp26) derived from local Slovenian cheese in Pathogen Combat Project, which showed a good in vitro antimicrobial effect on Escherichia coli (E. coli). Several parameters were followed to look for differences between both groups in the acute phase of the UTI and after 6 months of taking probiotic or placebo supplementation. Our results showed no statistically significant differences between both groups; however, two children in the placebo group suffered a recurrence of febrile UTI within 6 months of the follow-up period, while there were no recurrences of UTI in the probiotic group. In the test group, the number of febrile days after the initiation of antibiotics with probiotics was shorter, although not reaching statistical significance (p = 0.084). According to our results, probiotics might be helpful in alleviating UTI symptoms and in UTI prevention. Further research with a larger sample size is warranted. Additionally, basic scientific studies for the selection of proper immunobiotic strains of probiotics should be performed.
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  • 文章类型: Journal Article
    目的:这项回顾性研究的目的是调查广泛的抗高血压(AH)药物对德国一般诊所诊断的门诊患者尿路感染(UTI)的影响。
    方法:该研究纳入了2010年1月至2019年12月在德国的1274个一般实践中,新诊断为UTI的367,960名年龄≥18岁的患者。对代表五个AH治疗类别的五组进行了分析(利尿剂(DIU);β受体阻滞剂(BB);钙通道阻滞剂(CCB);ACE抑制剂(ACEi);血管紧张素II受体阻滞剂(ARB)),每个包含73,592名患者。与所有其他抗高血压药物类别(作为一组)相比,使用Cox回归模型来分析每种抗高血压药物类别与UTI发生率之间的关联。
    结果:使用DIU治疗的患者中UTI诊断的发生率略高(8.6%),其次是ACEi(8.1%),ARB(7.9%),和建行(6.5%)。5.6%的DIU和4.3%的CCB患者给予UTI抗生素治疗。在所有治疗类别中,女性UTI和抗生素治疗的发生率远高于男性。在所研究的任何AH治疗类别中未观察到UTI发病率或抗生素治疗的显著增加或减少。
    结论:本研究未发现在接受ACEi治疗的患者中UTI发病率或抗生素治疗的显著增加或减少,ACB,CCB,β受体阻滞剂或利尿剂。在所有研究的AH课程中,女性UTI和抗生素治疗的发病率高于男性,虽然不是很重要。
    OBJECTIVE: The aim of this retrospective study was to investigate the impact of a broad spectrum of antihypertensive (AH) medications on urinary tract infections (UTI) of outpatients diagnosed in general practices in Germany.
    METHODS: This study included a total of 367,960 patients aged ≥ 18 years newly a diagnosed with UTI in 1274 general practices in Germany between January 2010 and December 2019. The analysis was conducted for five groups representing five AH therapy classes (diuretics (DIU); beta blockers (BB); calcium channel blockers (CCB); ACE inhibitors (ACEi); angiotensin II receptor blockers (ARB)), each containing 73,592 patients. A Cox regression model was used to analyze the association between each antihypertensive drug class and UTI incidence as compared to all other antihypertensive drug classes (as a group).
    RESULTS: The incidence of UTI diagnosis was slightly higher in patients treated with DIU (8.6%), followed by ACEi (8.1%), ARB (7.9%), and CCB (6.5%). Antibiotic therapy for UTI was given in 5.6% of DIU and 4.3% of CCB patients. The incidence of UTI and antibiotic therapy was much higher in women than in men across all therapy classes. No significant increase or decrease in UTI incidence or antibiotic therapy was observed in any of the AH therapy classes investigated.
    CONCLUSIONS: The present study did not identify a significant increase or decrease of UTI incidence or antibiotic therapy in patients treated with ACEi, ACB, CCB, beta blockers or diuretics. Across all AH classes studied, the incidence of UTI and antibiotic therapy was higher in women than in men, although not significantly.
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  • 文章类型: Journal Article
    我们的研究旨在确定尿路感染(UTI)的病因,分离细菌的抗性概况,加纳糖尿病患者与菌尿相关的大肠杆菌和毒力因子。
    在加纳国家糖尿病管理和研究中心对982名糖尿病患者的中游尿液样本进行了尿路病原体检测。使用标准细菌学方法,使用Kirby-Bauer圆盘扩散对分离株进行抗菌谱测试,根据CLSI指南。采用聚合酶链反应(PCR)对分离的大肠杆菌进行系统发育分组和毒力因子(VF)基因研究。
    尿路感染的总体患病率为9.2%,尿路病原菌主要为克雷伯菌属。(55.6%)和大肠杆菌(31.3%)。年龄,糖尿病的持续时间,既往有UTI病史是与UTI相关的危险因素(p值<0.05).对头孢呋辛的高抗菌耐药性(84%),氨苄青霉素(80%),观察到庆大霉素(70.7%)。VFs在各系统发育组的分布显示sfa-iutA-KpstmII-KpsTMIII基因与B2组相关,iutA-ibe与D组相关。
    分离的尿路病原菌具有高度抗性,大肠杆菌分离株具有不同的VFs。强烈建议连续监测糖尿病患者与UTI相关的细菌。
    UNASSIGNED: Our study aimed to determine the etiology of urinary tract infections (UTIs), resistance profiles of isolated bacteria, and virulence factors of Escherichia coli associated with bacteriuria in diabetic patients in Ghana.
    UNASSIGNED: Midstream urine samples from 982 diabetic patients were tested for uropathogens at the National Diabetes Management and Research Centre in Ghana, using standard bacteriological methods, with antibiogram testing of the isolates using the Kirby-Bauer disk diffusion, as per CLSI guidelines. Polymerase chain reaction (PCR) was used to investigate the phylogenetic groupings and virulence factor (VF) genes of isolated E. coli.
    UNASSIGNED: The overall prevalence of UTIs was 9.2%, and the main uropathogens were Klebsiella spp. (55.6%) and Escherichia coli (31.3%). Age, duration of diabetes, and a previous history of UTIs were risk factors associated with UTI (p-value < 0.05). High levels of antibacterial resistance to cefuroxime (84%), ampicillin (80%), and gentamicin (70.7%) were observed. The distribution of VFs in each phylogenetic group revealed that sfa-iutA-KpsTMII-KpsTMIII genes were associated with group B2, and iutA-ibe were associated with group D.
    UNASSIGNED: The isolated uropathogens were highly resistant, and the E. coli isolates possessed varying VFs. Continuous monitoring of bacteria associated with UTI in diabetics is highly recommended.
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  • 文章类型: Journal Article
    尽管斯里兰卡属于超广谱β-内酰胺酶(ESBL)患病率高的地区,产AmpCβ-内酰胺酶和碳青霉烯酶的肠杆菌科,有关抗菌素耐药性(AMR)的数据有限。我们研究了斯里兰卡西部省两家医院的肠杆菌科尿液病原体产生的β-内酰胺酶的患病率和多样性。
    ESBL,通过表型测试然后进行基因分型来检测AmpCβ-内酰胺酶和碳青霉烯酶的产生。
    导致尿路感染(UTI)的物种是大肠杆菌(69%),肺炎克雷伯菌(16%)和肠杆菌(6%)。ESBL的患病率(50%),AmpCβ-内酰胺酶(19%)和碳青霉烯酶(11%)表型高,医院获得性(HA-UTI)(75%)高于社区获得性UTI(CA-UTI)(42%)。由产生碳青霉烯酶的肠杆菌科(5%)引起的CA-UTI的鉴定令人震惊。只有一个ESBL基因,检测到blaCTX-M-15。在大肠杆菌和肺炎克雷伯菌中发现的AmpCβ-内酰胺酶基因是blaCMY-2,blaCMY-42和blaDHA-1,而肠杆菌属。携带BlaACT-1。碳青霉烯酶基因分别为blaNDM-1、blaNDM-4、blaOXA-181和blaOXA-232,blaIMP和blaVIM不存在。多个bla基因同时出现,一些分离株含有六种不同的bla基因,很常见。没有碳青霉烯酶基因的耐碳青霉烯类分离株在外膜孔蛋白基因中显示突变,大肠杆菌的ompF和肺炎克雷伯菌的ompK36。与产生β-内酰胺酶的肠杆菌科UTI相关的因素为年龄≥50岁,以前住院,存在留置导尿管,糖尿病或其他慢性疾病和复发性尿路感染的病史。
    这项研究增加了斯里兰卡目前缺乏的AMR数据。
    Although Sri Lanka belongs to a region with a high prevalence of extended-spectrum β-lactamase (ESBL), AmpC β-lactamase and carbapenemase-producing Enterobacteriaceae, data regarding antimicrobial resistance (AMR) is limited. We studied the prevalence and diversity of β-lactamases produced by Enterobacteriaceae urinary pathogens from two hospitals in the Western Province of Sri Lanka.
    ESBL, AmpC β-lactamase and carbapenemase production was detected by phenotypic testing followed by genotyping.
    The species responsible for urinary tract infections (UTI) were Escherichia coli (69%), Klebsiella pneumoniae (16%) and Enterobacter sp (6%). The prevalence of ESBL (50%), AmpC β-lactamase (19%) and carbapenemase (11%) phenotypes was high, and greater in hospital-acquired (HA-UTI) (75%) than in community-acquired UTI (CA-UTI) (42%). Identification of CA-UTI caused by carbapenemase-producing Enterobacteriaceae (5%) is alarming. Only one ESBL gene, blaCTX- M-15, was detected. AmpC β-lactamase genes found in E. coli and K. pneumoniae were blaCMY-2, blaCMY-42 and blaDHA-1, while Enterobacter sp. carried blaACT-1. Carbapenemase genes were blaNDM-1, blaNDM-4, blaOXA-181 and blaOXA-232, while blaKPC, blaIMP and blaVIM were absent. Co-occurrence of multiple bla genes, with some isolates harbouring six different bla genes, was common. Carbapenem-resistant isolates without carbapenemase genes displayed mutations in the outer membrane porin genes, ompF of E. coli and ompK36 of K. pneumoniae. Factors associated with UTI with β-lactamase-producing Enterobacteriaceae were age ≥50 years, previous hospitalization, presence of an indwelling urinary catheter, history of diabetes mellitus or other chronic illness and recurrent urinary tract infections.
    This study adds to the currently scarce data on AMR in Sri Lanka.
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  • 文章类型: Journal Article
    由超广谱β-内酰胺酶大肠杆菌(ESBL-EC)引起的尿路感染在世界范围内正在增加,并且由于治疗选择通常有限而成为当前关注的问题。这项研究调查了抗菌药物敏感性,抗菌素抗性基因(ARGs),和Cerdanya医院尿ESBL-EC分离株的生物多样性,一家欧洲跨境医院,结合了法国和西班牙的医疗保健模式。使用MicroscanWalkAway®系统确定细菌鉴定和敏感性,并通过双盘协同方法检查ESBL生产。使用IonS5™下一代测序系统对分离物进行测序,然后使用SPADEs软件组装全基因组序列,并使用PubMLST进行分析,ResFinder,FimTyper,PlasmidFinder,和VirulenceFinder。通过构建基于装配的核心SNV比对进行系统发育分析,然后是使用Harvest套件中的Parsnp构建的系统发育树。研究的所有分离株都具有多重耐药性,可以分为19种具有高度遗传多样性的不同序列类型。最普遍的ESBL酶是CTX-M-14和CTX-M-15。还鉴定了高风险国际克隆(ST131、ST10和ST405)。结果表明,在Cerdanya医院不存在ESBL-MDR-EC的单个优势克隆。
    Urinary tract infections caused by extended-spectrum β-lactamase Escherichia coli (ESBL-EC) are increasing worldwide and are a current concern because treatment options are often limited. This study investigated antimicrobial susceptibility, antimicrobial resistance genes (ARGs), and the biological diversity of urinary ESBL-EC isolates at Cerdanya Hospital, a European cross-border hospital that combines French and Spanish healthcare models. Bacterial identification and susceptibility were determined using the Microscan WalkAway® system and ESBL production was examined by the double-disk synergy method. Isolates were sequenced using the Ion S5™ next-generation sequencing system, with the whole-genome sequences then assembled using SPADEs software and analyzed using PubMLST, ResFinder, FimTyper, PlasmidFinder, and VirulenceFinder. A phylogenetic analysis was performed by constructing an assembly-based core-SNV alignment, followed by a phylogenetic tree constructed using Parsnp from the Harvest suite. All isolates studied were multidrug-resistant and could be classified into 19 different sequence types characterized by a high genetic diversity. The most prevalent ESBL-enzymes were CTX-M-14 and CTX-M-15. High-risk international clones (ST131, ST10, and ST405) were also identified. The results demonstrated the absence of a single predominant clone of ESBL-MDR-EC at Cerdanya Hospital.
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