Trp, tryptophan

Trp,色氨酸
  • 文章类型: Journal Article
    褪黑素是松果体中的主要神经内分泌产物。褪黑素可以调节昼夜节律相关的生理过程。证据表明褪黑素在毛囊中的重要作用,皮肤,和直觉。褪黑激素和皮肤病之间似乎有密切的联系。在这次审查中,我们专注于褪黑激素的生化活性(特别是在皮肤中)及其有前途的临床应用的最新研究。
    Melatonin is the main neuroendocrine product in the pineal gland. Melatonin can regulate circadian rhythm-related physiological processes. Evidence indicates an important role of melatonin in hair follicles, skin, and gut. There appears to be a close association between melatonin and skin disorders. In this review, we focus on the latest research of the biochemical activities of melatonin (especially in the skin) and its promising clinical applications.
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  • 文章类型: Journal Article
    在这项工作中,通过多光谱和分子对接研究了低温真空加热下肌原纤维蛋白(MP)与丙二醛和4-羟基-2-壬烯醛的结合机制。结果表明,结合相互作用和温度升高导致构象发生显著变化,蛋白质固有荧光值降低,表面疏水性,和荧光激发-发射矩阵光谱。此外,α-螺旋和β-转角的减少,β-折叠的增加和MP的随机卷曲,暗示MP分子更加展开。等温滴定量热法和分子对接结果表明,与MP结合的主要驱动力是氢键,丙二醛的结合能力优于4-羟基-2-壬烯醛。此外,提高加热温度有利于MP的结合反应,并增强了MP的构象转变。这些结果将为进一步研究st鱼的脂质和蛋白质相互作用提供参考。
    In this work, the binding mechanism of myofibrillar protein (MP) with malondialdehyde and 4-hydroxy-2-nonenal under low temperature vacuum heating was investigated via multispectroscopic and molecular docking. The results showed that binding interaction and increasing temperature caused significant changes in the conformations as well as a decrease in the value of protein intrinsic fluorescence, surface hydrophobicity, and fluorescence excitation-emission matrix spectra. Furthermore, the decrease in α-helix and β-turn, increase in β-sheet and a random coil of MP, imply the MP molecules to be more unfolded. Isothermal titration calorimetry and molecular docking results showed that main driving force for binding with MP was hydrogen bond, and the binding ability of malondialdehyde was superior to that of 4-hydroxy-2-nonenal. Moreover, increasing the heating temperature was beneficial to the binding reaction and intensified the conformational transition of MP. These results will provide a reference for further studies on the lipid and protein interaction of sturgeon.
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  • 文章类型: Case Reports
    经典的苯丙酮尿症(PKU)对育龄妇女提出了独特的挑战。在怀孕的背景下,控制不佳的高苯丙氨酸血症可导致被称为母体PKU综合征的婴儿的毁灭性结局。我们介绍了患有经典PKU的女性无法维持有限的饮食且难以接受药物治疗的情况。她选择接受多米诺骨牌肝移植,从典型的支链酮酸脱氢酶缺乏症(枫糖浆尿病)的供体接受器官。血浆苯丙氨酸浓度在移植后几天内恢复正常,并在随访的第一年中以不受限制的饮食保持不变。患者报告主观情绪改善,能级,和整体生活质量。在适当的临床环境中,肝移植应考虑为PKU患者提供代谢稳定性,特别是育龄妇女。
    Classical phenylketonuria (PKU) presents a unique challenge for women of child-bearing age. In the context of pregnancy, poorly controlled hyperphenylalaninemia can result in a devastating constellation of outcomes for the baby referred to as the maternal PKU Syndrome. We present the case of a woman with classical PKU unable to maintain a restricted diet and refractory to pharmacological therapies. She elected to undergo a domino liver transplant, receiving an organ from a donor with classical branched chain ketoacid dehydrogenase deficiency (maple syrup urine disease). Plasma phenylalanine concentrations normalized within a few days after transplant and remained so on an unrestricted diet during the first year of follow-up. The patient reports subjective improvements in mood, energy level, and overall quality of life. In the appropriate clinical setting, liver transplant should be considered to provide metabolic stability for PKU patients, particularly women of childbearing age.
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  • 文章类型: Journal Article
    未经证实:缺乏对新型冠状病毒疾病的治疗导致寻找能够抑制病毒复制的特定抗病毒药物。植物界已被证明是具有抗病毒潜力的新分子的重要来源。
    UNASSIGNED:本研究旨在利用各种计算工具来鉴定最有资格的候选药物,这些候选药物具有通过抑制主要蛋白酶(Mpro)酶来阻止SARS-COV-2病毒复制的能力。
    未经证实:我们选择了提取物对先前发现的冠状病毒具有抑制潜力的植物。调查了它们的植物成分,并制备了100个分子的文库。然后,计算工具,如分子对接,利用ADMET和分子动力学模拟来筛选化合物并评估它们对Mpro酶的影响。
    未经鉴定:所有的植物成分都显示出对Mpro酶的良好结合亲和力。其中月桂碱具有最高的结合亲和力,即-294.1533kcal/mol。在ADMET分析中,模拟了1.2ns的最佳三种配体,然后将其中的稳定配体进一步模拟20ns。结果表明,在月桂碱w.r.t.蛋白质残基中未观察到构象变化,较低的RMSD值表明月桂碱-蛋白质复合物稳定20ns。
    未经批准:劳罗利辛,黑斑草根的活性成分,被发现具有良好的ADMET谱并且具有停止酶活性的能力。因此,这使得月桂碱成为治疗COVID-19的良好候选药物。
    UNASSIGNED: Lack of treatment of novel Coronavirus disease led to the search of specific antivirals that are capable to inhibit the replication of the virus. The plant kingdom has demonstrated to be an important source of new molecules with antiviral potential.
    UNASSIGNED: The present study aims to utilize various computational tools to identify the most eligible drug candidate that have capabilities to halt the replication of SARS-COV-2 virus by inhibiting Main protease (Mpro) enzyme.
    UNASSIGNED: We have selected plants whose extracts have inhibitory potential against previously discovered coronaviruses. Their phytoconstituents were surveyed and a library of 100 molecules was prepared. Then, computational tools such as molecular docking, ADMET and molecular dynamic simulations were utilized to screen the compounds and evaluate them against Mpro enzyme.
    UNASSIGNED: All the phytoconstituents showed good binding affinities towards Mpro enzyme. Among them laurolitsine possesses the highest binding affinity i.e. -294.1533 kcal/mol. On ADMET analysis of best three ligands were simulated for 1.2 ns, then the stable ligand among them was further simulated for 20 ns. Results revealed that no conformational changes were observed in the laurolitsine w.r.t. protein residues and low RMSD value suggested that the Laurolitsine-protein complex was stable for 20 ns.
    UNASSIGNED: Laurolitsine, an active constituent of roots of Lindera aggregata, was found to be having good ADMET profile and have capabilities to halt the activity of the enzyme. Therefore, this makes laurolitsine a good drug candidate for the treatment of COVID-19.
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  • 文章类型: Journal Article
    鱼藤酮是一种广谱农药,用于世界各地的各种农业实践。人类通过口服接触这种化学物质,鼻部,和真皮路线。鱼藤酮的吸入使肺的生物分子成分暴露于这种化学物质。肺的生物物理活动由肺表面活性剂精确调节以促进气体交换。表面活性蛋白(SP)是肺表面活性物质的基本成分。SP-A和SP-D等SP具有抗菌活性,可为肺部感染提供重要的第一道防线,而SP-B和SP-C主要参与呼吸循环和降低空气-水界面的表面张力。在这项研究中,使用AutoDockVina进行了分子对接分析,以研究鱼藤酮与四种SP的结合潜力。结果表明,鱼藤酮可以与SP-A的碳水化合物识别域(CRD)结合,N-,和SP-B的C末端肽,SP-C,和SP-D的CRD在多个位点通过几个相互作用介质如H键,C-H键,烷基键,pi-pi堆叠,范德华互动,和其他。鱼藤酮与SP的这种相互作用可以破坏肺中SP的生物物理和抗微生物功能,这可能会引起呼吸道疾病和病原体感染。
    Rotenone is a broad-spectrum pesticide employed in various agricultural practices all over the world. Human beings are exposed to this chemical through oral, nasal, and dermal routes. Inhalation of rotenone exposes bio-molecular components of lungs to this chemical. Biophysical activity of lungs is precisely regulated by pulmonary surfactant to facilitate gaseous exchange. Surfactant proteins (SPs) are the fundamental components of pulmonary surfactant. SPs like SP-A and SP-D have antimicrobial activities providing a crucial first line of defense against infections in lungs whereas SP-B and SP-C are mainly involved in respiratory cycle and reduction of surface tension at air-water interface. In this study, molecular docking analysis using AutoDock Vina has been conducted to investigate binding potential of rotenone with the four SPs. Results indicate that, rotenone can bind with carbohydrate recognition domain (CRD) of SP-A, N-, and C- terminal peptide of SP-B, SP-C, and CRD of SP-D at multiples sites via several interaction mediators such as H bonds, C-H bonds, alkyl bonds, pi-pi stacked, Van der Waals interaction, and other. Such interactions of rotenone with SPs can disrupt biophysical and anti-microbial functions of SPs in lungs that may invite respiratory ailments and pathogenic infections.
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  • 文章类型: Journal Article
    质膜转运蛋白在营养物质的导入中起着关键作用,包括糖,氨基酸,核碱基,羧酸,和金属离子,围绕真菌细胞。通过胞吞作用选择性去除这些转运蛋白是最重要的调节机制之一,可确保细胞快速适应不断变化的环境(例如,营养波动或不同的压力)。这种机制的核心是蛋白质网络,其中包括与抑制蛋白相关的运输衔接子(ART),该衔接子将泛素连接酶Rsp5与营养转运蛋白和内吞因子联系起来。转运蛋白构象变化,以及其胞质末端/环与质膜脂质之间的动态相互作用,在胞吞过程中也很关键。这里,我们回顾了有关营养转运蛋白内吞作用的分子机制的最新知识和最新发现,在酿酒酵母酵母和某些丝状真菌曲霉中。我们详细阐述了在自然界中发现的动态条件下,紧密调节的内吞作用对细胞适应性的生理重要性,并强调了对该过程的进一步理解和工程对于最大化滴度至关重要。工业生物技术过程中工程细胞工厂的速率和产量(TRY)值。
    Plasma membrane transporters play pivotal roles in the import of nutrients, including sugars, amino acids, nucleobases, carboxylic acids, and metal ions, that surround fungal cells. The selective removal of these transporters by endocytosis is one of the most important regulatory mechanisms that ensures a rapid adaptation of cells to the changing environment (e.g., nutrient fluctuations or different stresses). At the heart of this mechanism lies a network of proteins that includes the arrestin-related trafficking adaptors (ARTs) which link the ubiquitin ligase Rsp5 to nutrient transporters and endocytic factors. Transporter conformational changes, as well as dynamic interactions between its cytosolic termini/loops and with lipids of the plasma membrane, are also critical during the endocytic process. Here, we review the current knowledge and recent findings on the molecular mechanisms involved in nutrient transporter endocytosis, both in the budding yeast Saccharomyces cerevisiae and in some species of the filamentous fungus Aspergillus. We elaborate on the physiological importance of tightly regulated endocytosis for cellular fitness under dynamic conditions found in nature and highlight how further understanding and engineering of this process is essential to maximize titer, rate and yield (TRY)-values of engineered cell factories in industrial biotechnological processes.
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  • 文章类型: Journal Article
    化疗药物引起的肠毒性已成为中断治疗和停用已批准药物的重要原因。在这项研究中,我们证明,化疗药物引起的肠道损伤通常以色氨酸(Trp)-犬尿氨酸(KYN)-犬尿氨酸(KA)轴代谢的急剧上调为特征。机械上,化疗引起的肠道损伤引发了白细胞介素-6(IL-6)-吲哚胺2,3-双加氧酶1(IDO1)-芳烃受体(AHR)正反馈环的形成,加速犬尿氨酸途径在肠道中的代谢。此外,AHR和G蛋白偶联受体35(GPR35)负反馈通过逐渐感知肠道和巨噬细胞中的犬尿氨酸水平来调节肠道损伤和炎症,以维持肠道完整性和体内平衡。分别。此外,基于虚拟筛选和生物验证,从2388种批准的药物中发现了分别作为GPR35和AHR激动剂的伐地那非和利格列汀。重要的是,伐地那非和利格列汀在体内显著减轻化疗诱导的肠道毒性的结果表明,二者联合使用的化疗药物在临床上可能是一种有希望的癌症患者治疗策略.这项工作强调了GPR35和AHR作为犬尿氨酸途径代谢的守护者和针对肠道损伤的防御反应的核心组成部分。
    Intestinal toxicity induced by chemotherapeutics has become an important reason for the interruption of therapy and withdrawal of approved agents. In this study, we demonstrated that chemotherapeutics-induced intestinal damage were commonly characterized by the sharp upregulation of tryptophan (Trp)-kynurenine (KYN)-kynurenic acid (KA) axis metabolism. Mechanistically, chemotherapy-induced intestinal damage triggered the formation of an interleukin-6 (IL-6)-indoleamine 2,3-dioxygenase 1 (IDO1)-aryl hydrocarbon receptor (AHR) positive feedback loop, which accelerated kynurenine pathway metabolism in gut. Besides, AHR and G protein-coupled receptor 35 (GPR35) negative feedback regulates intestinal damage and inflammation to maintain intestinal integrity and homeostasis through gradually sensing kynurenic acid level in gut and macrophage, respectively. Moreover, based on virtual screening and biological verification, vardenafil and linagliptin as GPR35 and AHR agonists respectively were discovered from 2388 approved drugs. Importantly, the results that vardenafil and linagliptin significantly alleviated chemotherapy-induced intestinal toxicity in vivo suggests that chemotherapeutics combined with the two could be a promising therapeutic strategy for cancer patients in clinic. This work highlights GPR35 and AHR as the guardian of kynurenine pathway metabolism and core component of defense responses against intestinal damage.
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  • 文章类型: Journal Article
    帕金森病(PD)是一种复杂的多因素神经退行性疾病,其中各种代谢途径的改变有助于疾病的进展。色氨酸(TRP)是犬尿氨酸途径(KP)的主要前体,在各种体外研究中已经讨论过代谢产物喹啉酸(QUIN)引起神经毒性,犬尿氨酸(KYNA)分别充当神经保护剂。更多的研究也集中在其他KP代谢物及其酶的作用上,因为它与衰老和PD发病机理有关。直到现在,很少有研究针对基因突变在PD不利情况下异常KP代谢中的作用。因此,本综述提供了与PD相关的KP最新研究。此外,该综述强调了开发生物标志物的迫切性,这也将是产生PD替代治疗方法的一项举措.
    Parkinson\'s disease (PD) is a complex multi-factorial neurodegenerative disorder where various altered metabolic pathways contribute to the progression of the disease. Tryptophan (TRP) is a major precursor in kynurenine pathway (KP) and it has been discussed in various in vitro studies that the metabolites quinolinic acid (QUIN) causes neurotoxicity and kynurenic acid (KYNA) acts as neuroprotectant respectively. More studies are also focused on the effects of other KP metabolites and its enzymes as it has an association with ageing and PD pathogenesis. Until now, very few studies have targeted the role of genetic mutations in abnormal KP metabolism in adverse conditions of PD. Therefore, the present review gives an updated research studies on KP in connection with PD. Moreover, the review emphasizes on the urge for the development of biomarkers and also this would be an initiative in generating an alternative therapeutic approach for PD.
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  • 文章类型: Journal Article
    由SARS-CoV-2引起的严重急性呼吸系统综合症(SARS)在全球范围内空前蔓延,这描绘了大流行对人类健康的痛苦后果。经济和生态系统服务。到目前为止,新型冠状病毒(CoV)的爆发与SARS-CoV-2(2019年)有关,中东呼吸综合征冠状病毒(MERS-CoV,2012),和SARS-CoV-1(2003)事件。CoV涉及具有正义单链RNA(+ssRNA)的有包膜Betacoronavirus(βCoV)家族。很清楚的坚持,传输,SARS-CoV-2通过近距离传播,粪便-口腔途径现已成为社区传播的主要环境问题。CoV在胃肠道(GI)中的复制和持久性以及通过粪便脱落表明了向环境设置的潜在传播途径。尽管有证据,基于关于SARS-CoV-2在废水/污水/水中的发生和持久性的报道较少,感染病毒向社区的传播尚未确定。在这个领域,这篇通讯试图回顾肠膜病毒在环境环境中传播的可能流入途径,并参考其发生情况,持久性,检测,和灭活基于迄今为止出版的文献。通过载有肠道病毒的气溶胶通过空气传播的可能性,可能影响病毒传播的环境因素,综述了包膜病毒的消毒方法(常规和新兴)以及灭活机制。阐述了对废水流行病学(WBE)研究进行监视和预警信号的需求。这次交流将为理解SARS-CoV-2以及环境工程视角下的其他病毒提供基础,以设计有效的策略来对抗肠道病毒的传播,也是研究人员的工作文件,政策制定者和监管者。
    The unprecedented global spread of the severe acute respiratory syndrome (SARS) caused by SARS-CoV-2 is depicting the distressing pandemic consequence on human health, economy as well as ecosystem services. So far novel coronavirus (CoV) outbreaks were associated with SARS-CoV-2 (2019), middle east respiratory syndrome coronavirus (MERS-CoV, 2012), and SARS-CoV-1 (2003) events. CoV relates to the enveloped family of Betacoronavirus (βCoV) with positive-sense single-stranded RNA (+ssRNA). Knowing well the persistence, transmission, and spread of SARS-CoV-2 through proximity, the faecal-oral route is now emerging as a major environmental concern to community transmission. The replication and persistence of CoV in the gastrointestinal (GI) tract and shedding through stools is indicating a potential transmission route to the environment settings. Despite of the evidence, based on fewer reports on SARS-CoV-2 occurrence and persistence in wastewater/sewage/water, the transmission of the infective virus to the community is yet to be established. In this realm, this communication attempted to review the possible influx route of the enteric enveloped viral transmission in the environmental settings with reference to its occurrence, persistence, detection, and inactivation based on the published literature so far. The possibilities of airborne transmission through enteric virus-laden aerosols, environmental factors that may influence the viral transmission, and disinfection methods (conventional and emerging) as well as the inactivation mechanism with reference to the enveloped virus were reviewed. The need for wastewater epidemiology (WBE) studies for surveillance as well as for early warning signal was elaborated. This communication will provide a basis to understand the SARS-CoV-2 as well as other viruses in the context of the environmental engineering perspective to design effective strategies to counter the enteric virus transmission and also serves as a working paper for researchers, policy makers and regulators.
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  • 文章类型: Journal Article
    药物代谢组学已成功用于一种特定不良反应的毒性预测。然而在临床实践中,两种或两种以上不同的毒性总是相互伴随,这对药物代谢组学提出了新的挑战。胃肠道毒性和骨髓抑制是伊立替康(CPT-11)引起的两种主要不良反应,并且经常表现出很大的个体差异。在目前的研究中,我们进行了一项药物代谢组学研究,目的是筛选给药前血清中可同时预测迟发性腹泻和CPT-11骨髓抑制的唯一生物标志物.根据迟发性腹泻症状判断胃肠道毒性和骨髓抑制的严重程度和敏感性差异,组织病理学检查,相对细胞因子和血细胞计数。顺序进行基于质谱的非靶向和靶向代谢组学,以解剖给药前血清中的代谢物特征。最终,使用二元logistic回归分析筛选出两组代谢物作为晚发性腹泻和骨髓抑制个体差异的预测因子,分别。将此结果与现有预测因子进行比较,并由另一个独立的外部验证集进行验证。我们的研究表明,根据给药前代谢谱,毒性预测是可能的。药物代谢组学可能是复杂的毒性预测的潜在有用工具。我们的发现也为CPT-11精准医学提供了新的见解。
    Pharmacometabolomics has been already successfully used in toxicity prediction for one specific adverse effect. However in clinical practice, two or more different toxicities are always accompanied with each other, which puts forward new challenges for pharmacometabolomics. Gastrointestinal toxicity and myelosuppression are two major adverse effects induced by Irinotecan (CPT-11), and often show large individual differences. In the current study, a pharmacometabolomic study was performed to screen the exclusive biomarkers in predose serums which could predict late-onset diarrhea and myelosuppression of CPT-11 simultaneously. The severity and sensitivity differences in gastrointestinal toxicity and myelosuppression were judged by delayed-onset diarrhea symptoms, histopathology examination, relative cytokines and blood cell counts. Mass spectrometry-based non-targeted and targeted metabolomics were conducted in sequence to dissect metabolite signatures in predose serums. Eventually, two groups of metabolites were screened out as predictors for individual differences in late-onset diarrhea and myelosuppression using binary logistic regression, respectively. This result was compared with existing predictors and validated by another independent external validation set. Our study indicates the prediction of toxicity could be possible upon predose metabolic profile. Pharmacometabolomics can be a potentially useful tool for complicating toxicity prediction. Our findings also provide a new insight into CPT-11 precision medicine.
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