Tabular key

表格键
  • 文章类型: Journal Article
    Cyatholaimidae是主要海洋线虫的常见且多样化的家族,潜在的,有大量的物种被发现。该组的分类法缺乏有关字符进化史的信息以及可能与分类学相关的形态结构的详细描述。在巴西东南部的沿海地区描述了该家族的两个新物种,强调角质层上存在的孔复合物和孔样结构的分布和形态的重要性。角质层装饰和针状形状对Biarmifer物种的分类学重要性,以及Pomponema物种的precloacal补充剂结构,正在讨论。Biarmifernesiotessp.11月。与该属的其他物种的不同之处在于,在角质层上存在八排纵向孔复合物,并且交配结构的形状也不同。Pomponemalongispulumsp.11月。与最相似的物种不同,P.stomachorWieser,1954年,由于两栖中央凹的转动次数较少,较短的尾巴和角质层外侧分化的开始(咽部长度的3/4与咽部的末端,分别)。我们还从Pomponemalongispulumsp。获得了SSUrDNA序列。11月。,与Pomponemasp密切相关。(MN250093)约91%。包括每个属(Biarmifer和Pomponema)的物种鉴定的更新表格键,包含形态测量数据,与角质层装饰相关的字符,和交配结构。
    Cyatholaimidae is a common and diverse family of mainly marine nematodes, potentially, with a large number of species to be discovered. The taxonomy of the group is marked by a lack of information about the evolutionary history of the characters and of detailed descriptions of morphological structures that may be taxonomically relevant. Two new species of the family are described from a sublittoral region in Southeastern Brazil, emphasizing the importance of the distribution and morphology of pore complex and pore-like structures present on the cuticle. The taxonomic importance of the cuticle ornamentation and spicule shape for the Biarmifer species, as well as the precloacal supplements structures of Pomponema species, are discussed. Biarmifer nesiotes sp. nov. differs from other species of the genus by the presence of eight longitudinal rows of pore complex on the cuticle and by the shape of the copulatory structure. Pomponema longispiculum sp. nov. differs from the most similar species, P. stomachor Wieser, 1954, by the smaller number of turns of the amphidial fovea, the shorter tail and the beginning of the cuticle lateral differentiation (3/4 of the pharynx length vs. end of the pharynx, respectively). We also obtained the SSU rDNA sequence from Pomponema longispiculum sp. nov., which is closely related to Pomponema sp. (MN250093) by about 91%. Updated tabular keys to species identification of each genus (Biarmifer and Pomponema) are included, containing morphometric data, characters related to cuticle ornamentation, and copulatory structures.
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  • 文章类型: Journal Article
    疫霉,有203种,是全世界农业中非常重要的一个属。在这里,我们提供了在线资源“IDphy”(链接),以促进尽可能使用原始描述中的类型标本正确鉴定疫霉物种。IDphy强调对美国具有高经济影响和监管关注的物种。IDphy展示了截至2018年5月描述的161种可培养物种的交互式Lucid键和表格键,其中包括141种前类型和20个经过身份验证的标本。IDphy包含用于形态学和分子表征的SOP,以及词汇表,图片库,和许多链接。161份情况说明书中的每一份都包括对命名法的访问,形态和分子特征,包括ITSrDNA的序列,COI(条形码基因),YPT1,β-桶,EF1α,L10、HSP90等基因。IDphy包含一个创新的计算机BLAST和使用NCBI的系统发育序列分析。IDphy移动应用程序,2021年8月发布(适用于Android或iOS免费)(Link)允许用户将Lucid密钥带入实验室。IDphy是第一个基于植物病原体实施的类型的在线识别工具。在这份手稿中,我们还包括在IDphy出版后描述的21个新物种和一个杂种的信息,国际草药和文化收藏品中的类型和类型标本的状态,以及GenBank的基因组状态(目前有153个基因组装配,对应于42个描述的物种,包括16个类型)。IDphy在线资源的模型有效性和该手稿的内容可以激发其他研究人员为其他重要的植物病原体组开发其他识别工具。
    Phytophthora, with 203 species, is a genus of high importance in agriculture worldwide. Here, we present the online resource \"IDphy\", developed to facilitate the correct identification of species of Phytophthora using the type specimens from the original descriptions wherever possible. IDphy emphasizes species of high economic impact and regulatory concern for the United States. IDphy presents an interactive Lucid key and a tabular key for 161 culturable species described as of May 2018, including 141 ex-types and 20 well-authenticated specimens. IDphy contains standard operating procedures for morphological and molecular characterization, as well as a glossary, image gallery, and numerous links. Each of the 161 factsheets includes access to nomenclature and morphological and molecular features, including sequences of the internal transcribed spacer ribosomal DNA, cytochrome C oxidase subunit I (barcoding genes), YPT1, β-tubulin, elongation factor 1a, L10, heat shock protein 90, and other genes. IDphy contains an innovative in silico BLAST and phylogenetic sequence analysis using NCBI. The IDphy mobile app, released in August 2021 (free for Android or iOS), allows users to take the Lucid key into the laboratory. IDphy is the first online identification tool based on the ex-types implemented for plant pathogens. In this article, we also include information for 21 new species and one hybrid described after the publication of IDphy, the status of the specimens of the types and ex-types at international herbaria and culture collections, and the status of genomes at the GenBank (currently 153 genome assemblies which correspond to 42 described species, including 16 ex-types). The effectiveness of the IDphy online resource and the content of this article could inspire other researchers to develop additional identification tools for other important groups of plant pathogens.
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  • 文章类型: Journal Article
    The nematode Rhabditolaimus ulmi was found in galleries, adults, and larvae of Scolytus multistriatus, the vector of the Dutch elm disease, in St. Petersburg parks. This nematode co-occurred with Bursaphelenchus ulmophilus, which is another phoretic partner of S. multistriatus. Nematodes were cultured on the fungus Botryotinia fuckeliana in potato sugar agar (PA) and used for morphological analyses of adults, juveniles, eggs, and dauers. Nematode females showed a didelphic female genital tract rather than a monoprodelphic gonad as reported in the original description. Male bursa peloderan, caudal papillae include three preanal pairs and one precloacal unpaired papillae; seven postanal papilla pairs, among which one is pore-like and possibly the phasmid homolog, one subdorsal, and a pair of three closely situated posteriorly at bursa alae. The juvenile stages differ in size and structure of their sexual primordia. Sex of juveniles may be identified from the third stage. The dauer juvenile is a phoretic third juvenile stage (DJ3), which enters and remains localized in the buccal cavity of beetle adults and last-instar larvae and also under the elytra and in the ovipositor\'s cavity of pupae and imagoes. The first molt J1-J2 occurred inside the eggshell. Adult females laid eggs in early stages of embryonic development or containing molted J2. The propagative non-phoretic J2 inside the egg and J3 have a long and well-developed median bulb. The phoretic dauer DJ3 has a small spherical bulb like the J1 juvenile within the egg. In a sterile fungal culture, the nematodes feed on both mycelium and their unidentified ecto-symbiotic bacteria, located on nematode surface coat and multiplying in PA. Diagnosis and tabular key to the Rhabditolaimus species are given. Phylogenetic analysis of the D2-D3 of 28S rRNA gene sequences resulted in the Bayesian consensus tree with the highly supported clade of the Rhabditolaimus species.
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  • 文章类型: Journal Article
    A history of the description of the 50 valid species of Narella is given, beginning with the first species described in 1860. To help differentiate the various species, a tabular and a polychotomous key are provided. The species in the keys are arranged using nine characters or character sets that are believed to be of value at the species level. New characters or new significance given to previously described characters used in our keys include: 1) the nature of the dorsolateral edge of the basal scale, being ridged or not, 2) the thickness of the body wall scales, and 3) the arrangement of the coenenchymal scales (imbricate or mosaic), their thickness (thin or massive), and their outer surface ornamentation (ridged or not). All characters used in the keys are illustrated.
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