Respirometry

呼吸测量法
  • 文章类型: Journal Article
    呼吸测定法提供了生物体O2消耗率(VO2)的直接测量,这是其代谢率(能量消耗)的重要组成部分。在蚂蚁中,不同社会种姓(如工人和女王)之间的寿命差异可能很大,因物种而异。由于短命物种的代谢率较高,我们的目的是确定VO2和寿命如何在蚂蚁石膏中共同进化。在这种微小的动物模型中测量VO2可能具有挑战性,作为方法的第一步,我们验证了克拉克电极的使用,最初设计用于测量线粒体呼吸控制途径,用于评估密封室内蚂蚁的VO2。这是通过将其与停止流VO2和CO2产生进行比较来完成的,使用传统的间接量热装置。全球目标是提供可靠的协议,以对蚂蚁物种内部和之间的代谢率进行准确比较。不出所料,使用克拉克电极需要很高的时间分辨率,并显示女王和工人表现出不连续的呼吸,持续长达20分钟的呼吸暂停发作。
    Respirometry provides a direct measure of an organism\'s O2 consumption rate (VO2), which is a significant component of its metabolic rate (energy expenditure). Amongst ants, variations in lifespan between different social castes (such as workers and queens) can be substantial, varying depending to the species. As metabolic rate is higher in short-living species, we aimed to determine how VO2 and longevity may have coevolved within ant casts. Measuring VO2 in such tiny animal models can be challenging, and as a first methodological step, we validate the use of a Clark electrode, initially designed for measuring mitochondrial respiration control pathways, for assessing VO2 in ants within a sealed chamber. This was done by comparing it with stop-flow VO2 and CO2 production, using a traditional indirect calorimetry device. The global aim is to provide a reliable protocol to conduct accurate comparisons of metabolic rates within and among ant species. As expected, using Clark electrode entails high time resolution and revealed that queens and workers exhibited discontinuous respiration, with episodes of apnea lasting up to 20 min.
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  • 文章类型: Journal Article
    传统的废水处理厂(WWTP)不是为减少抗生素而设计的,它们的流出物是这些新兴污染物进入水生环境的主要途径之一,由于它们的毒性而引起重大关注,持久性,和生物蓄积性。当含有抗生素的废水进入生物反应器时,它们可以影响活性污泥的微生物群落,影响有机物和养分的生物降解过程。关于在抗生素存在下活性炭对生物反应器内活性污泥的影响的信息很少。鉴于此,代表性抗生素的效果,环丙沙星(CIP),萘啶酸(NAL),和红霉素(ERY),通过有和没有活性炭的呼吸测量法分析了污水处理厂常规活性污泥的性能。NAL和ERY对净异养生物量增长率(r\'x,H),减少百分比为26%-90%和31%-81%,分别。活性炭的加入减轻了这种影响,尤其是对于ERY来说,在r\'x中增量甚至为8%,当使用5ppm的ERY和80ppm的活性炭时,混合过程的H与不存在抗生素和活性炭时的值相比。这种效果归因于ERY的保留增强,与NAL相比,在活性炭的表面,可能是由于其较高的分子大小和对活性炭的亲和力(logKow=3.06)。在低污泥保留时间(低于8天)时,这种影响更为明显。实践要点:环丙沙星(CIP),萘啶酸(NAL),和红霉素(ERY)进行了研究。NAL和ERY对异养生长速率产生负面影响。研究了在活性炭存在下抗生素对微生物的影响。活性炭由于其吸附保留而与ERY主要相关。在低污泥保留时间下,活性炭的增强作用更为显着。
    Conventional wastewater treatment plants (WWTPs) are not designed for the abatement of antibiotics, and their effluents are one of the main entry ways of these emerging contaminants to the aquatic environment, causing major concern due to their toxicity, persistence, and bioaccumulation. When wastewater containing antibiotics enters the bioreactor, they can impact microbial communities of the activated sludge, affecting biodegradation processes of organic matter and nutrients. There is scarce information about the effect of activated carbon on the activated sludge within the bioreactor in presence of antibiotics. In light of this, the effect of representative antibiotics, ciprofloxacin (CIP), nalidixic acid (NAL), and erythromycin (ERY), on the performance of a conventional activated sludge of a WWTP was analyzed by respirometry with and without activated carbon. NAL and ERY negatively affected the net heterotrophic biomass growth rate (r\'x,H), with reduction percentages of 26%-90% and 31%-81%, respectively. The addition of activated carbon mitigated this effect, especially for ERY, with increments of even 8% in the r\'x,H for the hybrid process when working with 5 ppm of ERY and 80 ppm of activated carbon compared with the value in the absence of antibiotic and activated carbon. This effect was attributed to the enhanced retention of ERY, in comparison to NAL, on the surface of the activated carbon, probably due to its higher molecular size and affinity towards the activated carbon (log Kow = 3.06). This effect was more marked at low sludge retention times (below 8 days). PRACTITIONER POINTS: Ciprofloxacin (CIP), nalidixic acid (NAL), and erythromycin (ERY) were studied. NAL and ERY exerted negative impact on heterotrophic growth rate. Effect of antibiotics on microorganisms in the presence of activated carbon was studied. Activated carbon was mainly relevant for ERY due to its adsorption retention. Enhancement by activated carbon was more significant at low sludge retention times.
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  • 文章类型: Journal Article
    社会交往有时会成为压力的来源,但是社交伙伴也可以改善和缓冲压力。压力和新陈代谢紧密相连,但是,社会同伴在压力情况下调节代谢反应的程度以及这种影响是否因社会等级而异,人们对此知之甚少。为了调查这个问题,我们研究了新金丝雀,坦any尼喀湖特有的群居丽鱼鱼,测量了显性和下级个体在可见或相互隐藏时的代谢反应。当个人可以看到对方时,与优势人群相比,次级人群的最大代谢率较低,并且在进行详尽的追逐后恢复所需的时间更长。相比之下,当个体无法看到彼此时,支配者和下属的代谢反应没有差异。这些发现表明,显性个体的存在对下属有负面的代谢后果,即使在亲社会关系牢固的稳定社会群体中。
    Social interactions can sometimes be a source of stress, but social companions can also ameliorate and buffer against stress. Stress and metabolism are closely linked, but the degree to which social companions modulate metabolic responses during stressful situations-and whether such effects differ depending on social rank-is poorly understood. To investigate this question, we studied Neolamprologus pulcher, a group-living cichlid fish endemic to Lake Tanganyika and measured the metabolic responses of dominant and subordinate individuals when they were either visible or concealed from one another. When individuals could see each other, subordinates had lower maximum metabolic rates and tended to take longer to recover following an exhaustive chase compared with dominants. In contrast, metabolic responses of dominants and subordinates did not differ when individuals could not see one another. These findings suggest that the presence of a dominant individual has negative metabolic consequences for subordinates, even in stable social groups with strong prosocial relationships.
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  • 文章类型: Journal Article
    斑马鱼已成为生理学中广泛使用的脊椎动物模型,因此需要可靠地测量其代谢率。我们开发了一种3D打印呼吸计和游泳隧道系统,并将其用于获得标准代谢率(SMR)和最大值的精确测量。斑马鱼在休息和最大运动下的有氧代谢率(MMR),分别。我们将慢速(逐步)协议与快速(连续)协议进行了比较,以确定MMR。与慢速协议和数据相比,快速协议产生的耗氧率稍高(但不显着)。与慢速协议相反,服从正态分布。这些发现表明,快速协议是获得斑马鱼MMR准确值的快速可靠方法。我们为研究人员提供打印系统的3D图纸,帮助简化斑马鱼和其他小型鱼类的代谢研究领域。
    Zebrafish have become a widely used vertebrate model in physiology and reliable measures of their metabolic rate are needed. We have developed a 3D-printed respirometer and swim tunnel system and used it for obtaining accurate measurement of standard metabolic rate (SMR) and maximal, aerobic metabolic rate (MMR) in zebrafish under rest and maximal exercise, respectively. We compared a slow (stepwise) protocol to a fast (continuous) protocol for determining MMR. The fast protocol yielded slightly (but not significantly) higher oxygen consumption rates than the slow protocol and the data, in contrast to the slow protocol, followed a normal distribution. These findings point to the fast protocol as a fast and reliable method for obtaining accurate values of MMR in zebrafish. We make the 3D drawings for printing the system available to researchers, to help streamline the field of metabolic research in zebrafish and other smaller fish species.
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  • 文章类型: Journal Article
    公海和沿海水域的溶解氧水平正在下降(海洋脱氧),对海洋大型动物的影响知之甚少。所有1000多种弹枝(鲨鱼,溜冰鞋,和光线)是强制性的水呼吸器,有各种生活史策略和氧气需求。这篇综述表明,尽管许多弹性膜通常避免缺氧水,随着活动的变化,它们似乎也能够承受轻度至中度的缺氧,通气反应,循环和血液学参数的改变,和g结构的形态改变。然而,这样的策略可能不足以承受严重的,进步,或延长的缺氧或缺氧,其中厌氧代谢途径可以在有限的时间内使用。随着气候变暖,水温升高,放热弹性膜将表现出升高的代谢率,并且可能难以忍受甚至与脱氧相关的轻度缺氧的影响。因此,在温暖的沿海或表层浮游水域中,持续的低氧条件可能导致弹性分支分布的变化。与脱氧直接相关的弹性膜的大量死亡率很少被观察到,但可能被低估了。一个关键的问题是,由于脱氧导致的缺氧扩大,栖息地体积的减少将如何影响弹性鱼和工业渔业之间的相互作用。延绳钓渔业每单位努力捕捞受威胁的中上层鲨鱼,例如,与邻近的区域相比,已经证明高于氧气最小区域,常氧地区,并归因于鲨鱼的垂直栖息地压缩与增加的捕捞努力重叠。海洋热浪等复合压力源如何改变脱氧的脆弱性仍然是一个悬而未决的问题。超过三分之一的弹枝物种被列为濒危物种,现在,保护和管理的优先事项是理解和减轻海洋脱氧效应,以及过度捕捞已经造成的种群减少。
    Levels of dissolved oxygen in open ocean and coastal waters are decreasing (ocean deoxygenation), with poorly understood effects on marine megafauna. All of the more than 1000 species of elasmobranchs (sharks, skates, and rays) are obligate water breathers, with a variety of life-history strategies and oxygen requirements. This review demonstrates that although many elasmobranchs typically avoid hypoxic water, they also appear capable of withstanding mild to moderate hypoxia with changes in activity, ventilatory responses, alterations to circulatory and hematological parameters, and morphological alterations to gill structures. However, such strategies may be insufficient to withstand severe, progressive, or prolonged hypoxia or anoxia where anaerobic metabolic pathways may be used for limited periods. As water temperatures increase with climate warming, ectothermic elasmobranchs will exhibit elevated metabolic rates and are likely to be less able to tolerate the effects of even mild hypoxia associated with deoxygenation. As a result, sustained hypoxic conditions in warmer coastal or surface-pelagic waters are likely to lead to shifts in elasmobranch distributions. Mass mortalities of elasmobranchs linked directly to deoxygenation have only rarely been observed but are likely underreported. One key concern is how reductions in habitat volume as a result of expanding hypoxia resulting from deoxygenation will influence interactions between elasmobranchs and industrial fisheries. Catch per unit of effort of threatened pelagic sharks by longline fisheries, for instance, has been shown to be higher above oxygen minimum zones compared to adjacent, normoxic regions, and attributed to vertical habitat compression of sharks overlapping with increased fishing effort. How a compound stressor such as marine heatwaves alters vulnerability to deoxygenation remains an open question. With over a third of elasmobranch species listed as endangered, a priority for conservation and management now lies in understanding and mitigating ocean deoxygenation effects in addition to population declines already occurring from overfishing.
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  • 文章类型: Journal Article
    动物从其环境中吸收氧气的最大速率(O2,max)是其生理学和生态学的关键方面。在鱼类中,通常通过在增量游泳测试或从穷举追逐中恢复过程中测量摄氧量来量化O2,max。在这篇评论中,我们汇编了最近的研究,将这两种技术应用于同一条鱼,并表明这两种方法通常对一组个体产生不同的O2,max的平均估计值。此外,在一群鱼里,游泳过程中确定的心氧最大值估计值与追逐恢复过程中确定的估计值相关性差(即个体的心氧最大值在不同方法中不可重复)。缺乏共识的一种解释是这些方法测量不同的生理状态,每个人都有自己的行为,解剖和生化决定因素。我们建议这些方法不能直接互换,但是,更确切地说,每个都适合解决鱼类生物学中的不同问题。我们建议研究人员选择反映其研究生物学背景的方法,并且我们主张使用准确的术语来承认用于升高血管O2的技术(例如,峰值血管O2,游泳或峰值血管O2,恢复)。如果研究的目的是估计\'真实\'O2,最大的个体或物种,我们建议试点研究比较方法,最好使用重复措施设计。我们希望这些建议能够为鱼类内部和之间的O2,max变化的原因和后果提供新的见解。
    The maximum rate at which animals take up oxygen from their environment (ṀO2,max) is a crucial aspect of their physiology and ecology. In fishes, ṀO2,max is commonly quantified by measuring oxygen uptake either during incremental swimming tests or during recovery from an exhaustive chase. In this Commentary, we compile recent studies that apply both techniques to the same fish and show that the two methods typically yield different mean estimates of ṀO2,max for a group of individuals. Furthermore, within a group of fish, estimates of ṀO2,max determined during swimming are poorly correlated with estimates determined during recovery from chasing (i.e. an individual\'s ṀO2,max is not repeatable across methods). One explanation for the lack of agreement is that these methods measure different physiological states, each with their own behavioural, anatomical and biochemical determinants. We propose that these methods are not directly interchangeable but, rather, each is suited to address different questions in fish biology. We suggest that researchers select the method that reflects the biological contexts of their study, and we advocate for the use of accurate terminology that acknowledges the technique used to elevate ṀO2 (e.g. peak ṀO2,swim or peak ṀO2,recovery). If the study\'s objective is to estimate the \'true\' ṀO2,max of an individual or species, we recommend that pilot studies compare methods, preferably using repeated-measures designs. We hope that these recommendations contribute new insights into the causes and consequences of variation in ṀO2,max within and among fish species.
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  • 文章类型: Journal Article
    微生物迅速定殖进入海洋的微塑料,形成生物膜,如果摄入,与微塑料一起消耗。过去的研究经常忽略将鱼类暴露在生物污染的微塑料中,只选择清洁的微塑料,尽管鱼遇到清洁的微塑料的可能性很低。这里,我们研究了幼鱼中生物附着的聚乙烯微塑料(300-335μm)暴露的生理影响。间歇性流量呼吸测量,抗氧化酶活性,在鱼类暴露于清洁环境后,研究了脂质过氧化,生物淤积,或者没有微塑料珠。与暴露于清洁微塑料的鱼相比,暴露于生物污染微塑料的鱼的有氧范围更大,而清洁微塑料中的抗氧化酶和脂质过氧化水平更高。清洁的微塑料暴露表明更高的健身成本,可能是由于生物膜的营养优势或不同的生物利用度。这些发现强调了在预测海洋系统中污染物增加的影响时,在暴露实验中复制自然因素的重要性。
    Microorganisms quickly colonise microplastics entering the ocean, forming a biofilm that, if ingested, is consumed with the microplastics. Past research often neglects to expose fish to biofouled microplastics, opting only for clean microplastics despite the low likelihood that fish will encounter clean microplastics. Here, we investigate the physiological impacts of biofouled polyethylene microplastic (300-335 μm) exposure in juvenile fish. Intermittent flow respirometry, antioxidant enzyme activity, and lipid peroxidation were investigated after fish were exposed to clean, biofouled, or no microplastic beads. Fish exposed to biofouled microplastics had a wider aerobic scope than those exposed to clean microplastics while antioxidant enzyme and lipid peroxidation levels were higher in clean microplastics. Clean microplastic exposure indicated higher fitness costs, potentially due to a nutritional advantage of the biofilm or varying bioavailability. These findings highlight the importance of replicating natural factors in exposure experiments when predicting the impacts of increasing pollutants in marine systems.
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  • 文章类型: Journal Article
    Bioenergetics为一系列基本和应用资源管理问题提供了信息,但是,由于远程估计代谢率等关键参数的挑战,研究结果往往受到缺乏生态现实主义的限制。要启用现场应用程序,我们用小嘴鲈鱼(Micropterusdolomieu,0.7-2千克)通过手术植入加速度计发射器,并在一系列水温(6、12、18和24°C)的游泳隧道呼吸计中暴露于ramp-Ucrit游泳协议。随着游泳速度的增加,鱼的加速度呈指数级增长,较小的鱼和雌性鱼的单位速度加速度更高,在较冷的温度下。鱼的比重代谢率(MO2;mgO2kg-1h-1)随游泳速度而增加,加速度,和温度,随着鱼的质量减少,当组合时,它们是MO2的强预测因子。最大代谢率(MMR)估计在22°C达到峰值,但是最大持续游泳速度(Ucrit)仍然很高。高于20°C的90-100ms-1,基于二阶多项式函数。需氧镜(AS)估计值在20°C时达到峰值(在17-24°C时>90%AS;在11-28°C时>50%AS)。雄性表现出略微较高的MMR,AS,和Ucrit比女性在更高的温度。较大的鱼通常表现出较高的Ucrit,但较小的鱼的性能范围稍宽(AS,Ucrit)在温度之间,受益于更高的MMR,尽管静息代谢率随温度的急剧增加。这些发现使实地研究能够原位估算小嘴鲈鱼的代谢指标,以表征其生态能量学并为生物能量学模型提供信息。
    Bioenergetics is informative for a range of fundamental and applied resource management questions, but findings are often constrained by a lack of ecological realism due to the challenges of remotely estimating key parameters such as metabolic rate. To enable field applications, we conducted a calibration study with smallmouth bass (Micropterus dolomieu, 0.7-2 kg) surgically implanted with accelerometer transmitters and exposed to a ramp-Ucrit swimming protocol in a swim tunnel respirometer across a range of water temperatures (6, 12, 18, and 24°C). There was an exponential increase in fish acceleration with swimming speed, and acceleration per speed was higher in smaller fish and female fish, and at colder temperatures. Mass-specific fish metabolic rate (MO2; mg O2 kg-1 h-1) increased with swimming speed, acceleration, and temperature, and decreased with fish mass, which when combined were strong predictors of MO2. Maximum metabolic rate (MMR) was estimated to peak at 22°C, but maximum sustained swimming speed (Ucrit) remained high at c. 90-100 m s-1 above 20°C, based on second-order polynomial functions. Aerobic scope (AS) estimates peaked at 20°C (>90% AS at 17-24°C; >50% AS at 11-28°C). Males exhibited marginally higher MMR, AS, and Ucrit than females at higher temperatures. Larger fish generally exhibited higher Ucrit, but smaller fish had a marginally broader performance range (AS, Ucrit) among temperatures, benefiting from higher MMR despite a steeper increase in resting metabolic rate with temperature. These findings enable field studies to estimate metabolic metrics of smallmouth bass in situ to characterize their ecological energetics and inform bioenergetics models.
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  • 文章类型: Journal Article
    下沉或漂浮是海洋中浮游生物和颗粒的自然状态。进行测量时,模拟这些条件至关重要,比如呼吸测量法,因为它们允许在下沉的颗粒和周围流动的水之间自然交换底物和产物,并防止习惯于运动的生物体改变其新陈代谢。我们开发了一个旋转培养箱,Rotobod(以其旋转和确定生物需氧量的能力命名,BOD),这独特地实现了小体积的自动氧气测量,同时保持样品的自然悬浮状态。这样可以对氧气利用率进行高灵敏度的测量,并随后对单个颗粒或小型浮游生物进行表征,比如co足类动物,水母,或者原生生物。由于这种方法是非破坏性的,它可以与孵育期间和之后的几个进一步的测量相结合,如稳定同位素添加和分子分析。这使得仪器对生态学家有用,生物地球化学家,以及可能的其他用户群体,如水产养殖设施。这里,我们介绍了我们新开发的仪器的技术背景,并提供了如何利用它来确定小生物和颗粒中氧气的产生和消耗的例子。
    Sinking or floating is the natural state of planktonic organisms and particles in the ocean. Simulating these conditions is critical when making measurements, such as respirometry, because they allow the natural exchange of substrates and products between sinking particles and water flowing around them and prevent organisms that are accustomed to motion from changing their metabolism. We developed a rotating incubator, the RotoBOD (named after its capability to rotate and determine biological oxygen demand, BOD), that uniquely enables automated oxygen measurements in small volumes while keeping the samples in their natural state of suspension. This allows highly sensitive rate measurements of oxygen utilization and subsequent characterization of single particles or small planktonic organisms, such as copepods, jellyfish, or protists. As this approach is nondestructive, it can be combined with several further measurements during and after the incubation, such as stable isotope additions and molecular analyses. This makes the instrument useful for ecologists, biogeochemists, and potentially other user groups such as aquaculture facilities. Here, we present the technical background of our newly developed apparatus and provide examples of how it can be utilized to determine oxygen production and consumption in small organisms and particles.
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  • 文章类型: Journal Article
    这项研究调查了在非原位生物修复过程中,将硫(S)与氮(N)和磷(P)混合以增强柴油污染土壤中微生物活性的有效性。虽然N和P修正通常用于刺激土著微生物,添加S的潜在好处受到的关注较少。该研究发现,历史上被污染的土壤中总石油烃(TPH;1270mg/kg)没有营养限制,并且发现孵育温度对于增强微生物活性更为关键。然而,添加了5000mg/kg柴油的土壤在NP和NPS改良后显示出活性增加。有趣的是,10°C的NPS修正比20°C的微生物活性更高,表明定制的营养修正方法在寒冷条件下优化生物修复的潜力。总的来说,这项研究表明,在非原位生物修复过程中,将S与N和P结合可以增强柴油污染土壤中的微生物活性。此外,该研究强调了在设计用于生物修复的营养修正方法时考虑孵育温度的重要性,尤其是在寒冷的条件下。这些发现可以指导未来针对石油烃污染土壤的有效生物修复策略的设计和实施。
    This study investigated the effectiveness of incorporating sulphur (S) with nitrogen (N) and phosphorus (P) for enhancing microbial activity in diesel-contaminated soil during ex-situ bioremediation. While N and P amendments are commonly used to stimulate indigenous microorganisms, the potential benefits of adding S have received less attention. The study found that historically contaminated soil with a moderate concentration of total petroleum hydrocarbons (TPH; 1270 mg/kg) did not have nutrient limitation, and incubation temperature was found to be more critical for enhancing microbial activity. However, soil spiked with an additional 5000 mg/kg of diesel showed increased activity following NP and NPS amendment. Interestingly, NPS amendment at 10 °C resulted in higher microbial activity than at 20 °C, indicating the potential for a tailored nutrient amendment approach to optimize bioremediation in cold conditions. Overall, this study suggests that incorporating S with N and P can enhance microbial activity in diesel-contaminated soil during ex-situ bioremediation. Furthermore, the study highlights the importance of considering incubation temperature in designing a nutrient amendment approach for bioremediation, especially in cold conditions. These findings can guide the design and implementation of future effective bioremediation strategies for petroleum hydrocarbon-contaminated soil.
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