基因组编辑工具,特别是成簇的定期间隔短回文重复(CRISPR)系统(例如,CRISPR/Cas9),以及它们重新用于表观遗传编辑平台,作为安全和可定制的癌症疗法提供了巨大的潜力。具体来说,人类恶性肿瘤中的各种转录异常,如肿瘤抑制基因的沉默和癌基因的异位再表达,使用CRISPR激活和抑制系统已成功靶向,几乎没有脱靶效应。在这些系统中,例如,核酸酶失活的Cas9蛋白(dCas9)融合至诱导靶向基因的选择性激活或抑制的一个或多个结构域。尽管取得了这些进展,这些分子有效的体内递送到靶癌细胞中代表了完成转化为癌症临床治疗环境的关键障碍。主要障碍包括dCas9融合蛋白的大尺寸,蛋白质和gRNA的多模态递送的必要性,以及这些制剂引发有害免疫反应的潜力。在这种情况下,提供CRISPR的病毒方法面临几个限制,例如病毒基因组的包装能力,核酸整合到宿主细胞基因组中的潜力,和病毒蛋白的免疫原性,带来严重的安全问题。响应COVID-19大流行的mRNA疫苗的快速发展重新激发了人们对基于mRNA的CRISPR/dCas9递送方法的兴趣。同时,由于它们的高承载能力,可扩展性,用于细胞靶向的可定制表面修饰,低免疫原性,脂质纳米颗粒(LNP)作为非病毒载体已被广泛研究。在这一章中,我们首先描述了用于表观遗传编辑的优化的dCas9效应子mRNA和gRNA的设计。我们概述了适用于dCas9mRNA递送的LNP的制剂。此外,我们提供了将dCas9效应mRNA和gRNA共封装到这些LNP中的方案,以及将这些制剂递送至乳腺癌细胞系(体外)和小鼠模型(体内)的详细方法。
Genome editing tools, particularly the Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) systems (e.g., CRISPR/Cas9), and their repurposing into epigenetic editing platforms, offer enormous potential as safe and customizable therapies for cancer. Specifically, various transcriptional abnormalities in human malignancies, such as silencing of tumor suppressors and ectopic re-expression of oncogenes, have been successfully targeted with virtually no off-target effects using CRISPR activation and repression systems. In these systems, the nuclease-deactivated Cas9 protein (dCas9) is fused to one or more domains inducing selective activation or repression of the targeted genes. Despite these advances, the efficient in vivo delivery of these molecules into the target cancer cells represents a critical barrier to accomplishing translation into a clinical therapy setting for cancer. Major obstacles include the large size of dCas9 fusion proteins, the necessity of multimodal delivery of protein and gRNAs, and the potential of these formulations to elicit detrimental immune responses.In this context, viral methods for delivering CRISPR face several limitations, such as the packaging capacity of the viral genome, the potential for integration of the nucleic acids into the host cells genome, and immunogenicity of viral proteins, posing serious safety concerns. The rapid development of mRNA vaccines in response to the COVID-19 pandemic has rekindled interest in mRNA-based approaches for CRISPR/dCas9 delivery. Simultaneously, due to their high loading capacity, scalability, customizable surface modification for cell targeting, and low immunogenicity, lipid nanoparticles (LNPs) have been widely explored as nonviral vectors. In this chapter, we first describe the design of optimized dCas9-effector mRNAs and gRNAs for epigenetic editing. We outline formulations of LNPs suitable for dCas9 mRNA delivery. Additionally, we provide a protocol for the co-encapsulation of the dCas9-effector mRNAs and gRNA into these LNPs, along with detailed methods for delivering these formulations to both cell lines (in vitro) and mouse models of breast cancer (in vivo).