RGS1

RGS1
  • 文章类型: Journal Article
    背景:食管癌是世界上最常见的恶性肿瘤之一。预防食管癌的发展和进展迫在眉睫。据报道,癌症干细胞(CSC)具有启动肿瘤发生的能力,降低肿瘤的干细胞样特征是抑制肿瘤发生发展的重要策略。miRNA是癌症干性的关键调节因子。这里,我们旨在研究miR-191-3p在食管癌细胞干性中的作用和调控机制。
    方法:用慢病毒系统建立miR-191-3p稳定表达的食管癌细胞。CCK-8测定,transwell分析,创伤愈合试验用于评估miR-191-3p对食管癌细胞增殖和转移的影响。干性相关标志物(NANOG,OCT4,SOX2),ALDH活动,在裸鼠中进行球体形成试验和皮下肿瘤模型以评估体外和体内食管癌细胞的干性特性。双荧光素酶报告基因实验用于验证其分子机制。
    结果:在这里,我们发现miR-191-3p的过表达在体外和体内促进了食管癌细胞的干性特性,包括增加食管癌细胞的增殖和转移能力,干性相关标记NANOG的表达,OCT4和SOX2,ALDH活性,形成的球体数量和肿瘤的生长。生物信息学分析和双荧光素酶实验表明,G蛋白信号调节因子1(RGS1)是miR-191-3p的定向靶基因,并减弱了miR-191-3p对食管癌细胞干性的促进作用。此外,我们发现RGS1敲低通过负调控CXCR4激活PI3K/AKT通路,促进食管癌细胞的干性。
    结论:我们的发现表明miR-191-3p靶向的RGS1通过抑制CXCR4/PI3K/AKT通路抑制食管癌细胞的干性,提供了未来潜在的预后标志物和治疗靶点。
    BACKGROUND: Esophageal cancer is one of the most common malignant tumors in the world. It is urgent to prevent the development and progression of esophageal cancer. Cancer stem cells (CSCs) were reported to have the ability to initiate tumorigenesis, and reducing the stem cell-like characteristics of tumors is an important strategy to inhibit the occurrence and development of tumors. miRNAs are key regulators of the stemness of cancer. Here, we aimed to investigate the role and regulatory mechanism of miR-191-3p in the stemness properties of esophageal cancer cells.
    METHODS: Esophageal cancer cells with stable expression of miR-191-3p were established by lentivirus system. CCK-8 assay, transwell assay, wound healing assay were used to evaluate the effect of miR-191-3p on proliferation and metastasis of esophageal cancer cells. The expression of stemness-related markers (NANOG, OCT4, SOX2), ALDH activity, sphere-forming assay and subcutaneous tumor model in nude mice were performed to evaluate the stemness properties of esophageal cancer cells in vitro and in vivo. Dual-luciferase reporter assay was used to verify the molecular mechanism.
    RESULTS: Here we found that overexpression of miR-191-3p promoted the stemness properties of esophageal cancer cells in vitro and in vivo, including increasing esophageal cancer cell proliferation and metastasis ability, the expression of stemness-related markers NANOG, OCT4, and SOX2, ALDH activity, the number of spheres formed and tumor growth. Bioinformatic analysis and dual-luciferase assay demonstrated that regulator of G protein signaling 1 (RGS1) was the directed target gene of miR-191-3p and attenuated the promotion effect of miR-191-3p on the stemness of esophageal cancer cells. Furthermore, we found that RGS1 knockdown activated the PI3K/AKT pathway by negatively regulating CXCR4 to promote the stemness of esophageal cancer cells.
    CONCLUSIONS: Our findings revealed that RGS1 targeted by miR-191-3p inhibited the stemness of esophageal cancer cells by suppressing the CXCR4/PI3K/AKT pathway, which provide potential prognostic markers and therapeutic targets in the future.
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  • 文章类型: Journal Article
    最近的证据强调了增强子在调节转录机制和影响包括类风湿性关节炎(RA)在内的人类疾病发展中的功能。增强子RNA(eRNA)是从活性增强子区域转录的RNA分子。本研究探讨了eRNA在RA基因转录和破骨细胞形成中的特定功能。根据生物信息学预测,G蛋白信号调节因子1(RGS1)相关的eRNA在破骨细胞中高度激活。在患有胶原蛋白诱导的关节炎的小鼠以及M-CSF/可溶性RANKL刺激的巨噬细胞(源自单核细胞)中,RGS1mRNA增加。这归因于增加的RGSleRNA活性。5'-eRNA的沉默阻断了叉头框J3(FOXJ3)和RGS1启动子之间的结合,从而抑制RGS1转录。RGS1通过PLC-IP3R依赖性Ca2+反应加速破骨细胞生成。敲除FOXJ3或RGS1改善关节炎严重程度,改善病理变化,并减少体内和体外的破骨细胞生成和骨侵蚀。然而,RGS1过表达否定了FOXJ3沉默的作用。总之,这项研究表明,RGS1eRNA驱动的FOXJ3/RGS1轴的转录激活通过PLC-IP3R依赖性Ca2反应加速了RA中破骨细胞的生成。这一发现可能为eRNA在RA基因转录和破骨细胞生成中的作用提供了新的见解。
    Recent evidence has highlighted the functions of enhancers in modulating transcriptional machinery and affecting the development of human diseases including rheumatoid arthritis (RA). Enhancer RNAs (eRNAs) are RNA molecules transcribed from active enhancer regions. This study investigates the specific function of eRNA in gene transcription and osteoclastogenesis in RA. Regulator of G protein signaling 1 (RGS1)-associated eRNA was highly activated in osteoclasts according to bioinformatics prediction. RGS1 mRNA was increased in mice with collagen-induced arthritis as well as in M-CSF/soluble RANKL-stimulated macrophages (derived from monocytes). This was ascribed to increased RGS1 eRNA activity. Silencing of 5\'-eRNA blocked the binding between forkhead box J3 (FOXJ3) and the RGS1 promoter, thus suppressing RGS1 transcription. RGS1 accelerated osteoclastogenesis through PLC-IP3R-dependent Ca2+ response. Knockdown of either FOXJ3 or RGS1 ameliorated arthritis severity, improved pathological changes, and reduced osteoclastogenesis and bone erosion in vivo and in vitro. However, the effects of FOXJ3 silencing were negated by RGS1 overexpression. In conclusion, this study demonstrates that the RGS1 eRNA-driven transcriptional activation of the FOXJ3/RGS1 axis accelerates osteoclastogenesis through PLC-IP3R dependent Ca2+ response in RA. The finding may offer novel insights into the role of eRNA in gene transcription and osteoclastogenesis in RA.
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  • 文章类型: Journal Article
    全球气候变化伴随着二氧化碳(CO2)富集和高温胁迫,植物如何适应复合环境和潜在机制仍不清楚。这里,我们表明,升高的CO2减轻了植物对高温胁迫的敏感性,番茄(Solanumlycopersicum)叶片中的质外生葡萄糖(Glc)水平显着增加。外源Glc处理增强了番茄在环境CO2条件下对高温胁迫的适应力。基于细胞的生物层干涉术,亚细胞定位,和Split-Luc分析显示,Glc与番茄G蛋白信号调节因子1(RGS1)结合,并以浓度依赖性方式诱导RGS1内吞作用,从而诱导RGS1-G蛋白α亚基(GPA1)解离。使用rgs1和gpa1突变体,我们发现RGS1负调节耐热性,并且是升高的CO2-Glc诱导的耐热性所必需的。GPA1正向调节CO2-Glc诱导的耐热性。转录组和叶绿素荧光参数分析进一步揭示了GPA1整合了与光合作用和光保护相关的机制来调节耐热性。这些结果表明,Glc-RGS1-GPA1信号在番茄中CO2诱导的耐热性提高中起着至关重要的作用。这些信息增强了我们对响应全球气候变化的胁迫恢复力中Glc-G蛋白信号传导功能的理解,并将有助于基因工程方法改善植物恢复力。
    Global climate change is accompanied by carbon dioxide (CO2) enrichment and high temperature (HT) stress; however, how plants adapt to the combined environments and the underlying mechanisms remain largely unclear. In this study, we show that elevated CO2 alleviated plant sensitivity to HT stress, with significantly increased apoplastic glucose (Glc) levels in tomato (Solanum lycopersicum) leaves. Exogenous Glc treatment enhanced tomato resilience to HT stress under ambient CO2 conditions. Cell-based biolayer interferometry, subcellular localization, and Split-luciferase assays revealed that Glc bound to the tomato regulator of G protein signaling 1 (RGS1) and induced RGS1 endocytosis and thereby RGS1-G protein α subunit (GPA1) dissociation in a concentration-dependent manner. Using rgs1 and gpa1 mutants, we found that RGS1 negatively regulated thermotolerance and was required for elevated CO2-Glc-induced thermotolerance. GPA1 positively regulated the elevated CO2-Glc-induced thermotolerance. A combined transcriptome and chlorophyll fluorescence parameter analysis further revealed that GPA1 integrated photosynthesis- and photoprotection-related mechanisms to regulate thermotolerance. These results demonstrate that Glc-RGS1-GPA1 signaling plays a crucial role in the elevated CO2-induced thermotolerance in tomato. This information enhances our understanding of the Glc-G protein signaling function in stress resilience in response to global climate change and will be helpful for genetic engineering approaches to improve plant resilience.
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  • 文章类型: Journal Article
    G蛋白信号调节因子1(RGS1)与肿瘤免疫微环境密切相关,在多种肿瘤和免疫细胞中高表达。RGS1在慢性胃炎向胃癌的动态进展中的具体作用尚未见报道,肿瘤相关巨噬细胞(TAMs)的作用也不清楚。在本研究中,通过使用基因表达综合(GEO)筛查以及癌症基因组图谱的广谱癌分析和临床预后分析,将RGS1鉴定为从慢性胃炎到胃癌的不同病理阶段的上调基因。结果表明RGS1在胃癌中高表达,具有潜在的预后价值。我们通过体内实验证实RGS1抑制胃癌细胞的增殖并促进细胞凋亡,体外实验进一步证实了这一点。此外,RGS1影响细胞迁移和侵袭。在我们随后对RGS1的研究中,我们发现了它在免疫反应中的作用。通过对单细胞和GEO数据库数据的分析,我们证实了它参与免疫细胞调节,特别是TAM激活。随后,我们进行了体内和体外实验,以证实RGS1参与极化M1巨噬细胞,同时通过肿瘤细胞间接调节M2巨噬细胞。总之,RGS1可能是慢性胃炎转化为胃癌的潜在靶点,对TAMs具有可测量的影响,这值得进一步深入研究。
    Regulator of G protein signaling 1 (RGS1) is closely associated with the tumor immune microenvironment and is highly expressed in various tumors and immune cells. The specific effects of RGS1 in the dynamic progression from chronic gastritis to gastric cancer have not been reported, and the role of tumor-associated macrophages (TAMs) is also unclear. In the present study, RGS1 was identified as an upregulated gene in different pathological stages ranging from chronic gastritis to gastric cancer by using Gene Expression Omnibus (GEO) screening together with pancancer analysis of The Cancer Genome Atlas and clinical prognostic analysis. The results indicated that RGS1 is highly expressed in gastric cancer and has potential prognostic value. We confirmed through in vivo experiments that RGS1 inhibited the proliferation of gastric cancer cells and promoted apoptosis, which was further corroborated by in vitro experiments. Additionally, RGS1 influenced cell migration and invasion. In our subsequent investigation of RGS1, we discovered its role in the immune response. Through analyses of single-cell and GEO database data, we confirmed its involvement in immune cell regulation, specifically TAM activation. Subsequently, we conducted in vivo and in vitro experiments to confirm the involvement of RGS1 in polarizing M1 macrophages while indirectly regulating M2 macrophages through tumor cells. In conclusion, RGS1 could be a potential target for the transformation of chronic gastritis into gastric cancer and has a measurable impact on TAMs, which warrants further in-depth research.
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  • 文章类型: Journal Article
    无反应性是当前癌症免疫检查点阻断疗法的主要障碍,机制尚未阐明。因此,有必要发现肿瘤免疫治疗耐药的机制和生物标志物。
    基于多个肿瘤数据库中的CD8+T细胞浸润进行生物信息学分析,以筛选出与抗肿瘤免疫相关的基因。G蛋白信号调节因子1(RGS1)和IFNγ-STAT1信号之间的关联,通过RT-qPCR检查MHCI抗原呈递途径,西方印迹,和流式细胞术。通过CHIP-qPCR和双荧光素酶测定研究了RGS1的调节机制。使用肿瘤细胞系全面研究了RGS1的临床和治疗意义,小鼠模型,和接受免疫治疗的临床样本。
    RGS1被鉴定为RGS家族中与免疫原性正相关的最高基因。肿瘤细胞中RGS1的抑制减弱了抗肿瘤免疫反应,并在肾和肺小鼠皮下肿瘤中引起对免疫疗法的抵抗。机械上,RGS1增强了激活转录因子3(ATF3)与干扰素γ受体1(IFNGR1)启动子的结合,激活的STAT1和随后的IFNγ诱导基因的表达,特别是CXCL9和MHCI类(MHCI),从而影响CD8+T细胞浸润和抗原呈递和加工。临床上,在接受免疫治疗的21例NSCLC患者中,RGS1表达水平降低与PD1抑制治疗耐药和无进展生存期缩短相关.
    一起,这些发现揭示了引发免疫治疗耐药的新机制,并突出了肿瘤固有RGS1的功能,这为未来致敏抗PD1免疫治疗的策略带来了新的见解.
    UNASSIGNED: Non-responsiveness is a major barrier in current cancer immune checkpoint blockade therapies, and the mechanism has not been elucidated yet. Therefore, it is necessary to discover the mechanism and biomarkers of tumor immunotherapeutic resistance.
    UNASSIGNED: Bioinformatics analysis was performed based on CD8+ T cell infiltration in multiple tumor databases to screen out genes related to anti-tumor immunity. Associations between Regulator of G-protein signaling 1 (RGS1) and IFNγ-STAT1 signaling, and MHCI antigen presentation pathway were examined by RT-qPCR, western blotting, and flow cytometry. The modulatory mechanisms of RGS1 were investigated via CHIP-qPCR and dual-luciferase assay. The clinical and therapeutic implications of RGS1 were comprehensively investigated using tumor cell lines, mouse models, and clinical samples receiving immunotherapy.
    UNASSIGNED: RGS1 was identified as the highest gene positively correlated with immunogenicity among RGS family. Inhibition of RGS1 in neoplastic cells dampened anti-tumor immune response and elicited resistance to immunotherapy in both renal and lung murine subcutaneous tumors. Mechanistically, RGS1 enhanced the binding of activating transcription factor 3 (ATF3) to the promoter of interferon gamma receptor 1 (IFNGR1), activated STAT1 and the subsequent expression of IFNγ-inducible genes, especially CXCL9 and MHC class I (MHCI), thereby influenced CD8+ T cell infiltration and antigen presentation and processing. Clinically, lower expression level of RGS1 was associated with resistance of PD1 inhibition therapy and shortened progression-free survival among 21 NSCLC patients receiving immunotherapy.
    UNASSIGNED: Together, these findings uncover a novel mechanism that elicits immunotherapy resistance and highlight the function of tumor-intrinsic RGS1, which brings new insights for future strategies to sensitize anti-PD1 immunotherapy.
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  • 文章类型: Journal Article
    背景:颅内动脉瘤(IA)的确切原因仍不清楚。然而,已知促炎因子有助于IA进展。IAs的免疫微环境的特定变化在很大程度上仍未被探索。
    方法:本研究分析了来自脑动脉瘤雄性小鼠模型的单细胞测序数据,集中在弹性蛋白酶诱导的Willis动脉瘤之前和之后的样本。这些数据有助于确定八个不同的细胞亚群:成纤维细胞,巨噬细胞,NK细胞,内皮细胞,B细胞,粒细胞,和单核细胞。该研究还涉及97个IA样本的大量RNA测序,利用ssGSEA和CIBERSORT算法进行分析。推断这些细胞之间的细胞间通讯以了解IA中的免疫动力学。
    结果:研究发现成纤维细胞和巨噬细胞在IA的各种疾病状态中占优势。值得注意的是,IA的发作以成纤维细胞的显着增加和巨噬细胞的减少为标志。细胞相互作用明显增加,特别是涉及巨噬细胞,在疾病发作时。通过富集分析,鉴定了12种潜在的免疫原性生物标志物。其中,Rgs1作为IA形成的关键分子出现,通过单细胞测序数据集中的二次验证确认。
    结论:对IA组织中免疫细胞组成和细胞间通讯的综合分析强调了巨噬细胞和Rgs1分子的重要作用。这些发现揭示了IA的生理和病理状况,提供对其免疫微环境的新见解。
    BACKGROUND: The exact cause of intracranial aneurysms (IA) is still unclear. However, pro-inflammatory factors are known to contribute to IA progression. The specific changes in the immune microenvironment of IAs remain largely unexplored.
    METHODS: This study analyzed single-cell sequencing data from a male mouse model of brain aneurysm, focusing on samples before and after elastase-induced Willis aneurysms. The data helped identify eight distinct cell subpopulations: fibroblasts, macrophages, NK cells, endothelial cells, B cells, granulocytes, and monocytes. The study also involved bulk RNA sequencing of 97 IA samples, utilizing ssGSEA and CIBERSORT algorithms for analysis. Intercellular communication among these cells was inferred to understand the immune dynamics in IA.
    RESULTS: The study found that fibroblasts and macrophages are predominant in various disease states of IA. Notably, the onset of IA was marked by a significant increase in fibroblasts and a decrease in macrophages. There was a marked increase in cellular interactions, especially involving macrophages, at the onset of the disease. Through enrichment analysis, 12 potential immunogenic biomarkers were identified. Of these, Rgs1 emerged as a critical molecule in IA formation, confirmed through secondary validation in a single-cell sequencing dataset.
    CONCLUSIONS: This comprehensive analysis of immune cell composition and intercellular communication in IA tissues highlights the significant roles of macrophages and the molecule Rgs1. These findings shed light on the physiological and pathological conditions of IA, offering new insights into its immune microenvironment.
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  • 文章类型: Journal Article
    肾间质纤维化(RIF)被认为是所有慢性肾病(CKD)患者发展为终末期肾病(ESRD)的共同途径。其基本病理表现为肾小管间质基质成分增多,而肾间质中肾小管上皮细胞的损伤和基质的过度积累最终会导致肾小管萎缩和阻塞,失去有效的肾脏单位,最终损害了肾脏的过滤功能。RIF的相关机制尚不清楚。本研究将探讨RGS1在RIF中的作用及相关机制。下载并分析RIF相关微阵列GSE22459和GSE76882。从临床RIF患者收集肾实质萎缩性花萼组织。细胞炎症,使用脂多糖(LPS)构建纤维化和动物RIF模型,TGF-β1与单侧输尿管闭塞(UUO)。HE和Masson染色检测肾组织标本的形态学改变。qRT-PCR,采用Westernblot和ELISA检测相关基因/蛋白的表达。RGS1是由GSE22459和GSE76882共差异表达的基因。RGS1在RIF患者肾组织中表达升高,细胞和动物RIF模型。敲除RGS1抑制肾细胞炎症反应,RIF小鼠的纤维化和肾纤维化。RGS1的过表达起着相反的作用。敲除RGS1抑制RIF细胞和小鼠模型的炎症反应。靶向RGS1可能是RIF治疗的潜在治疗策略。
    Renal interstitial fibrosis (RIF) is considered as a common pathway for all patients with chronic kidney disease (CKD) to progress to end-stage kidney disease (ESRD). The basic pathological manifestation is the increase of matrix component in the tubular interstitium, while the injury of tubular epithelial cells in the renal interstitium and the excessive accumulation of matrix will eventually lead to tubular atrophy and obstruction, loss of effective renal units, and finally impaired renal filtration function. The relevant mechanism of RIF remains unclear. The present study will investigate the function and relevant mechanism of RGS1 in RIF. The RIF-related microarrays GSE22459 and GSE76882 were downloaded and analyzed. Renal parenchymal atrophic calyx tissues were collected from clinical RIF patients. Cellular inflammation, fibrosis and animal RIF models were constructed using Lipopolysaccharide (LPS), TGF-β1 and unilateral ureteral occlusion (UUO). HE and Masson staining were performed to detect morphological alterations of renal tissue samples. qRT-PCR, Western blot and ELISA were carried out to detect the expression of relevant genes/proteins. RGS1 is a gene co-differentially expressed by GSE22459 and GSE76882. RGS1 expression was elevated in renal tissues of RIF patients, cells and animal RIF models. Knockdown of RGS1 inhibited renal cell inflammatory response, fibrosis and renal fibrosis in RIF mice. Overexpression of RGS1 plays the opposite role. Knockdown of RGS1 inhibited the inflammatory response in the RIF cell and mouse model. Targeting RGS1 might be a potential therapeutic strategy for RIF treatment.
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  • 文章类型: Journal Article
    胃癌正在成为全球癌症相关死亡的第四大原因。目的探讨RGS1在体内外胃癌中的作用。扩散,迁移,入侵,并确定NCIN87细胞和耐药NCIN87细胞(NCIN87-DR)的集落形成。使用流式细胞术测定法检查细胞凋亡和细胞周期。产生RGS1基因敲低载体(pLVshshRGS1)和异种移植肿瘤小鼠模型。RGS1和上皮间质转化(EMT)相关标志物,包括E-cadherin(E-cad),N-钙黏着蛋白(N-cad),子弹,和波形蛋白使用蛋白质印迹测定法检测。测量异种移植肿瘤小鼠的肿瘤大小,并使用免疫组织化学测定法检测Ki67表达。NCIN87-DR细胞增殖能力显著降低,迁移,和侵袭性与NCIN87细胞相比(p<0.05)。NCIN87-DR细胞表现出明显的早期凋亡和细胞周期的明显改变。NCIN87-DR细胞表现出明显高于NCIN87细胞的RGS1表达(p<0.01)。E-cad表达明显下降(p<0.01),N-cad表达明显下降(p<0.05),Slug(p<0.01),NCIN87-DR细胞中波形蛋白(p<0.05)表达明显高于NCIN87细胞。与未经处理的NCIN87-DR细胞相比,RGS1基因沉默显着降低了NCIN87-DR的增殖(p<0.01)。RGS1基因沉默的NCIN87-DR细胞免疫比没有RGS1沉默的小鼠更能抑制异种移植瘤小鼠的肿瘤生长(p<0.05)。与没有RGS1沉默的情况相比,RGS1基因沉默的NCIN87-DR细胞免疫显著下调肿瘤组织中Ki67的表达。总之,RGS1基因沉默在体外降低了NCIN87-DR细胞的增殖,在体内抑制了肿瘤的生长。因此,RGS1作为胃癌治疗的抗肿瘤靶标。
    Gastric cancer is becoming the 4th leading cause of cancer-associated death worldwide. The purpose of this study was to investigate the role of RGS1 in gastric cancer in vitro and in vivo. Proliferation, migration, invasion, and colony formation of NCIN87 cells and drug-resistant NCIN87 cells (NCIN87-DR) were determined. Cell apoptosis and cell cycle were examined using a flow cytometry assay. RGS1 gene knock-down vector (pLVshshRGS1) and Xenograft tumor mouse model was generated. RGS1 and epithelial-mesenchymal transition (EMT) associated markers, including E-cadherin (E-cad), N-cadherin (N-cad), Slug, and Vimentin were detected using a western blotting assay. Tumor size of Xenograft tumor mouse was measured and Ki67 expression was detected using the immunohistochemical assay. NCIN87-DR cells demonstrated significantly lower proliferation, migration, and invasion compared to those of NCIN87 cells (p < 0.05). NCIN87-DR cells showed obvious early apoptosis and displayed obvious alterations for the cell cycle. NCIN87-DR cells exhibited predominantly higher RGS1 expression than that in NCIN87 cells (p < 0.01). E-cad expression was markedly decreased (p < 0.01) and N-cad (p < 0.05), Slug (p < 0.01), Vimentin (p < 0.05) expressions were significantly increased in NCIN87-DR cells than those in NCIN87 cells. RGS1 gene silence remarkably reduced NCIN87-DR proliferation compared to that in NCIN87-DR cells without treatment (p < 0.01). RGS1 gene-silenced NCIN87-DR cell immunization predominantly inhibited tumor growth in Xenograft tumor mouse than that without RGS1 silence (p < 0.05). RGS1 gene-silenced NCIN87-DR cell immunization significantly downregulated Ki67 expression in tumor tissues compared with that without RGS1 silence. In conclusion, RGS1 gene silence reduced the proliferation of NCIN87-DR cells in vitro and inhibited tumor growth in vivo. Therefore, RGS1 served as an antitumor target for the gastric cancer treatment.
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  • 文章类型: Journal Article
    背景:调节性T细胞(Tregs)是决定免疫反应的核心,因此靶向Tregs进行免疫治疗是一种有前景的抗肿瘤发展和转移策略.
    目的:本研究的目的是鉴定靶向Tregs的基因以改善HCC的预后。
    方法:我们整合了来自不同样品的表达数据,以消除批次效应,并进一步在Scanpy中应用嵌入函数,以针对两个独立的scRNA-seq数据中的每一个进行HCC中CD4+T细胞的亚聚类。通过DoRothEA推断转录因子(TF)的活性。在WGCNAR包中进行基因表达网络分析。我们最终使用R包(survminer和survival)进行生存分析。进行多重免疫荧光分析以验证来自生物信息学分析的结果。
    结果:我们发现,在两个独立的公共scRNA-seq数据集中,与其他CD4+T细胞相比,Tregs中G蛋白信号调节因子1(RGS1)的表达显著升高,RGS1升高预测HCC患者的临床结局较差。多重免疫荧光分析支持RGS1在肿瘤组织中的HCCTregs中的表达高于在邻近组织中的表达。此外,Tregs中RGS1的表达与Tregs标记基因的表达呈正相关。C-X-C趋化因子受体4(CXCR4),以及scRNA-seq和批量RNA-seq数据中的三个CXCR4依赖性基因。我们进一步确定,与其他CD4+T细胞相比,这三个基因在Tregs中选择性表达。两种转录因子的活性,免疫球蛋白κJ区(RBPJ)和阴阳1(YY1)的重组信号结合蛋白,在RGS1高和RGS1低的HCCTregs中存在显着差异。
    结论:我们的研究结果表明,RGS1可能通过CXCR4信号调节Treg功能,RGS1可能是改善HCC免疫治疗反应的潜在靶点。
    BACKGROUND: Regulatory T cells (Tregs) are central to determine immune response, thus targeting Tregs for immunotherapy is a promising strategy against tumor development and metastasis.
    OBJECTIVE: The objective of this study was to identify genes for targeting Tregs to improve the outcome of HCC.
    METHODS: We integrated expression data from different samples to remove batch effects and further applied embedding function in Scanpy to conduct sub-clustering of CD4+ T cells in HCC for each of two independent scRNA-seq data. The activity of transcription factors (TFs) was inferred by DoRothEA. Gene expression network analysis was performed in WGCNA R package. We finally used R packages (survminer and survival) to conduct survival analysis. Multiplex immunofluorescence analysis was performed to validate the result from bioinformatic analyses.
    RESULTS: We found that regulator of G protein signaling 1 (RGS1) expression was significantly elevated in Tregs compared to other CD4+ T cells in two independent public scRNA-seq datasets, and increased RGS1 predicted inferior clinical outcome of HCC patients. Multiplex immunofluorescence analysis supported that the higher expression of RGS1 in HCC Tregs in tumor tissue compared to it in adjacent tissue. Moreover, RGS1 expression in Tregs was positively correlated with the expression of marker genes of Tregs, C-X-C chemokine receptor 4 (CXCR4), and three CXCR4-dependent genes in both scRNA-seq and bulk RNA-seq data. We further identified that these three genes were selectively expressed in Tregs as compared to other CD4+ T cells. The activities of two transcription factors, recombination signal binding protein for immunoglobulin kappa J region (RBPJ) and yin yang 1 (YY1), were significantly different in HCC Tregs with RGS1 high and RGS1 low.
    CONCLUSIONS: Our findings suggested that RGS1 may regulate Treg function possibly through CXCR4 signaling and RGS1 could be a potential target to improve responses for immunotherapy in HCC.
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  • 文章类型: Journal Article
    由Gα组成的异源三聚体GTP结合蛋白,Gβ和Gγ亚基是真核生物中多种信号通路的关键调节因子。在植物中,G蛋白是目前密集研究的焦点,因为它们参与调节许多农学上重要的性状,如种子产量。器官大小,脱落酸(ABA)依赖性信号和应激反应,植物防御反应,共生和氮利用效率。G蛋白生物化学在植物中调节这些过程的机理细节仍然未知。尽管核心G蛋白组分及其激活/失活化学在整个真核进化过程中广泛保守,他们的监管似乎已经在工厂里重新布线,以满足特定的需求。植物G蛋白可能是自发活跃的和/或受磷酸化依赖性变化的调节。通过脂质第二信使如磷脂酶的活性,或者甚至可能具有独立于核苷酸交换的调节。不管这些偏离既定的规范,植物G蛋白的生化特性是影响植物表型和反应的关键。这些活动的详细特征,在体外和植物中,将为精确操作这些蛋白质以满足未来的农业需求铺平道路。
    Heterotrimeric GTP-binding proteins comprised of Gα, Gβ and Gγ subunits are key regulators of a multitude of signaling pathways in eukaryotes. In plants, G-proteins are currently a focus of intense research due to their involvement in modulation of many agronomically important traits such as seed yield, organ size, abscisic acid (ABA)-dependent signaling and stress responses, plant defense responses, symbiosis and nitrogen use efficiency. The mechanistic details of G-protein biochemistry in modulating these processes in plants remain largely unknown. Although the core G-protein components and their activation/deactivation chemistries are broadly conserved throughout eukaryotic evolution, their regulation seems to have been rewired in plants to meet specific needs. Plant G-proteins may be spontaneously active and/or are regulated by phosphorylation-dependent changes, by the activity of lipid second messengers such as phospholipases, or may even have nucleotide-exchange independent regulation. Regardless of these deviations from the established norm, the biochemical properties of plant G-proteins are key to affecting plant phenotypes and responses. Detailed characterization of such activities, in vitro and in planta, will pave the way for precise manipulation of these proteins for future agricultural needs.
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