Phoneutria

Phoneutria
  • 文章类型: Journal Article
    捕食者与猎物的相互作用是生态学中最感兴趣的种间关系。蜘蛛是地球上最多样化和无处不在的陆地捕食者之一。它们的大饮食宽度通常与特定捕食行为和形态适应的发展有关。然而,对蜘蛛捕食行为的研究主要集中在特殊物种上,留下了发生在通才物种中的行为学变异性,使它们能够对不同的猎物类型做出反应。对于三种通才流浪蜘蛛来说,我们在互联网上搜索了捕食事件的图像,以确定最常见的猎物。随后,然后将焦点捕食者物种用于行为实验。使用高速视频,分析了不同猎物类型(蜘蛛和板球)的处理模式。我们的结果表明,猎物类型之间的处理方式存在显着差异。我们发现蜘蛛猎物经常绕轴旋转,从而使捕食者可以在猎物的腹侧区域咬伤,从而避免反击。相反,板球被任意旋转。我们的工作可能表明,这三种通才蜘蛛偏好不同地操纵猎物,而偏好旋转蜘蛛,允许他们利用各种防御机制来利用猎物。
    Predator-prey interactions are the interspecific relationships of greatest interest in ecology. Spiders are among the most diverse and ubiquitous terrestrial predators on the planet. Their large dietary breadth is often linked with the development of specific predatory behaviors and morphological adaptations. However, studies on the predatory behavior of spiders have mostly focused on specialist species, leaving behind the ethological variability occurring in generalist species that allow them to respond to the different prey types. For three species of generalist wandering spiders, we searched images of predation events on the Internet to determine the most common prey. Subsequently, the focal predator species were then used in behavioral experiments. Using high-speed videos, handling patterns for different prey types (spider and cricket) were analyzed. Our results show a notable difference in handling patterns between prey types. We found that the spider prey was often rotated around the axis allowing the predator to bite in the ventral region of the prey and thus avoid a counterattack. Contrary, crickets were arbitrarily rotated. Our work may be an indication that these three species of generalist spiders have a preference for manipulating prey differently with a preference to rotate spiders, allowing them to exploit prey with various defensive mechanisms.
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  • 文章类型: Journal Article
    蜘蛛毒液已经进化了数千年,优化喂养和防御机制。毒液成分显示出药理和生物技术潜力,对他们学习的兴趣越来越高。然而,分离蜘蛛毒素进行实验评估提出了重大挑战。为了解决这个问题,结合计算工具的转录组学分析已成为表征蜘蛛毒液的一种吸引人的方法。然而,许多序列在自动注释后仍未识别。在这项研究中,我们从Phoneutrianigriventer转录组中手动筛选了一个以前未注释的序列子集,并鉴定了新的推定毒液成分。我们的人工分析显示,29%的分析序列是潜在的毒液成分,29%的假设/未表征的蛋白质,和17%的细胞功能蛋白。只有25%的最初未注释的数据集没有任何标识。大多数重新分类的成分是富含半胱氨酸的肽,包括23种新型推定毒素。我们还发现了富含甘氨酸的肽(GRP),证实了以前对Phoneutriapertyi毒腺中GRP的描述。此外,为了强调蜘蛛毒腺转录本缺乏注释的复发,我们提供了一些已发表的蜘蛛毒转录组学研究中未识别序列百分比的调查。总之,我们的研究强调了人工管理在发现新毒液成分方面的重要性,并强调需要改进注释策略,以充分利用蜘蛛毒液的医学和生物技术潜力.
    Spider venoms have evolved over thousands of years, optimizing feeding and defense mechanisms. Venom components show pharmacological and biotechnological potential, rising interest in their study. However, the isolation of spider toxins for experimental evaluation poses significant challenges. To address this, transcriptomic analysis combined with computational tools has emerged as an appealing approach to characterizing spider venoms. However, many sequences remain unidentified after automatic annotation. In this study, we manually curated a subset of previously unannotated sequences from the Phoneutria nigriventer transcriptome and identified new putative venom components. Our manual analysis revealed 29 % of the analyzed sequences were potential venom components, 29 % hypothetical/uncharacterized proteins, and 17 % cellular function proteins. Only 25 % of the originally unannotated dataset remained without any identification. Most reclassified components were cysteine-rich peptides, including 23 novel putative toxins. We also found glycine-rich peptides (GRP), corroborating the previous description of GRPs in Phoneutria pertyi venom glands. Furthermore, to emphasize the recurrence of the lack of annotation in spider venom glands transcripts, we provide a survey of the percentage of unidentified sequences in several published spider venom transcriptomics studies. In conclusion, our study highlights the importance of manual curation in uncovering novel venom components and underscores the need for improved annotation strategies to fully exploit the medical and biotechnological potential of spider venoms.
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  • 文章类型: Journal Article
    蜘蛛毒液组成,在其他物质中,肽毒素对某些生理靶标的选择性使它们成为生物杀虫剂等应用的强大工具,镇痛药,抗心律失常药,抗菌药物,抗真菌药和抗疟药,在其他人中。生物杀虫剂是传统农用化学品的环境友好的替代品。在本文中,杀虫肽的一级结构是从类蜘蛛Phoneutriadepilata的毒腺转录组获得的(转录本IDPhdNttxNav24)。该肽含有53个氨基酸,包括形成5个二硫键的10个Cys残基。利用这种肽的氨基酸序列,通过重叠PCR从头构建合成基因,并将其克隆到表达载体中.一种重组肽,命名为delta-ctenitoxin(rCtx-4),已获得。有人表示,折叠,纯化和验证使用质谱(7994.61Da)。rCtx-4的杀虫活性通过胸腔内注射(LD501.2μg/g昆虫)证明,对小鼠无毒。rCtx-4是一种潜在的生物杀虫剂,可以在农业中具有广泛的应用。
    Spider venoms are composed, among other substances, of peptide toxins whose selectivity for certain physiological targets has made them powerful tools for applications such as bioinsecticides, analgesics, antiarrhythmics, antibacterials, antifungals and antimalarials, among others. Bioinsecticides are an environmentally friendly alternative to conventional agrochemicals. In this paper, the primary structure of an insecticidal peptide was obtained from the venom gland transcriptome of the ctenid spider Phoneutria depilata (Transcript ID PhdNtxNav24). The peptide contains 53 amino acids, including 10 Cys residues that form 5 disulfide bonds. Using the amino acid sequence of such peptide, a synthetic gene was constructed de novo by overlapping PCRs and cloned into an expression vector. A recombinant peptide, named delta-ctenitoxin (rCtx-4), was obtained. It was expressed, folded, purified and validated using mass spectrometry (7994.61 Da). The insecticidal activity of rCtx-4 was demonstrated through intrathoracic injection in crickets (LD50 1.2 μg/g insect) and it was not toxic to mice. rCtx-4 is a potential bioinsecticide that could have a broad spectrum of applications in agriculture.
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  • 文章类型: Journal Article
    简介:蜘蛛毒液是生物活性肽的独特来源,其中许多显示出显著的生物稳定性和神经活性。Phoneutrianigriventer,通常被称为巴西流浪蜘蛛,香蕉蜘蛛或“武装蜘蛛”,是南美特有的,也是世界上最危险的有毒蜘蛛之一。在巴西,每年有4,000起与P.nigriventer发生的爆炸事故,会导致包括阴茎异常勃起在内的症状,高血压,视力模糊,出汗,和呕吐。除了它的临床相关性,黑氏疟原虫毒液含有在一系列疾病模型中提供治疗效果的肽。方法:在本研究中,我们使用分级分离指导的高通量细胞测定结合蛋白质组学和多药理学活性,探索了黑利文特毒液的神经活性和分子多样性,以拓宽有关该毒液及其治疗潜力的知识,并为研究蜘蛛毒液衍生神经活性肽的研究流程提供了概念证明.我们使用神经母细胞瘤细胞系将蛋白质组学与离子通道分析相结合,以鉴定调节电压门控钠和钙通道活性的毒液化合物。以及烟碱乙酰胆碱受体。结果:我们的数据显示,与其他富含神经毒素的毒液相比,黑氏毒液是高度复杂的,并且包含电压门控离子通道的有效调节剂,根据其活性和结构将其分为四个神经活性肽家族。除了报道的P.nigriventer神经活性肽,我们鉴定出至少27种新的富含半胱氨酸的毒液肽,其活性和分子靶点尚待测定.讨论:我们的发现提供了一个平台,研究已知和新的神经活性成分在毒液中的生物活性。
    Introduction: Spider venoms are a unique source of bioactive peptides, many of which display remarkable biological stability and neuroactivity. Phoneutria nigriventer, often referred to as the Brazilian wandering spider, banana spider or \"armed\" spider, is endemic to South America and amongst the most dangerous venomous spiders in the world. There are 4,000 envenomation accidents with P. nigriventer each year in Brazil, which can lead to symptoms including priapism, hypertension, blurred vision, sweating, and vomiting. In addition to its clinical relevance, P. nigriventer venom contains peptides that provide therapeutic effects in a range of disease models. Methods: In this study, we explored the neuroactivity and molecular diversity of P. nigriventer venom using fractionation-guided high-throughput cellular assays coupled to proteomics and multi-pharmacology activity to broaden the knowledge about this venom and its therapeutic potential and provide a proof-of-concept for an investigative pipeline to study spider-venom derived neuroactive peptides. We coupled proteomics with ion channel assays using a neuroblastoma cell line to identify venom compounds that modulate the activity of voltage-gated sodium and calcium channels, as well as the nicotinic acetylcholine receptor. Results: Our data revealed that P. nigriventer venom is highly complex compared to other neurotoxin-rich venoms and contains potent modulators of voltage-gated ion channels which were classified into four families of neuroactive peptides based on their activity and structures. In addition to the reported P. nigriventer neuroactive peptides, we identified at least 27 novel cysteine-rich venom peptides for which their activity and molecular target remains to be determined. Discussion: Our findings provide a platform for studying the bioactivity of known and novel neuroactive components in the venom of P. nigriventer and other spiders and suggest that our discovery pipeline can be used to identify ion channel-targeting venom peptides with potential as pharmacological tools and to drug leads.
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  • 文章类型: Journal Article
    使用具有Illumina方案的RNA-seq分析了Phoneutriadepilata蜘蛛的毒腺的转录组,产生了86,424个组装的转录本。总共682个转录物被鉴定为潜在编码毒液组分。发现的大多数转录物是神经毒素(156),通常作用于钠和钙通道。然而,编码某些酶的转录本(239),生长因子(48),凝血因子(6),发现了一种利尿激素(1),在这个蜘蛛属中没有描述过。此外,对脱毛虫的毒液进行了酶学表征,和蛋白质组分析显示活性蛋白带和转录组中发现的蛋白序列之间的相关性。脱毛假单胞菌毒腺的转录组学分析显示了对其蛋白质成分的更深入描述,允许鉴定可能导致人类疾病治疗的新分子,或者可能是开发生物杀虫剂的模型。
    The transcriptome of the venom glands of the Phoneutria depilata spider was analyzed using RNA-seq with an Illumina protocol, which yielded 86,424 assembled transcripts. A total of 682 transcripts were identified as potentially coding for venom components. Most of the transcripts found were neurotoxins (156) that commonly act on sodium and calcium channels. Nevertheless, transcripts coding for some enzymes (239), growth factors (48), clotting factors (6), and a diuretic hormone (1) were found, which have not been described in this spider genus. Furthermore, an enzymatic characterization of the venom of P. depilata was performed, and the proteomic analysis showed a correlation between active protein bands and protein sequences found in the transcriptome. The transcriptomic analysis of P. depilata venom glands show a deeper description of its protein components, allowing the identification of novel molecules that could lead to the treatment of human diseases, or could be models for developing bioinsecticides.
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  • 文章类型: Journal Article
    未经证实:蜘蛛毒液通过与分子靶标高亲和力结合而诱导不同的生理药理作用,因此具有生物技术意义。其中一些毒素,作用于不同类型的离子通道,已经在Phoneutria属蜘蛛的毒液中发现,主要来自P.Nigriventer.尽管P.nigriventer毒素证明了药物潜力,关于同一属毒液分子的信息有限,因为它们的毒素特征仍然很差。了解这种多样性并阐明蜘蛛毒素作用机制的差异对于建立其真正的生物技术潜力至关重要。这促使我们比较了Phoneutria属的三种不同毒液:P.nigriventer(Pn-V),P.eickstedtae(Pe-V)和P.pertyi(Pp-V)。
    UNASSIGNED:通过SDS-PAGE对毒液进行生化和功能比较,HPLC,质谱,酶活性和电生理测定(全细胞膜片钳)。
    未经评估:所采用的方法表明,所有三种毒液在其成分上都具有整体相似性,只有微小的差异。大量类似蛋白质的存在是显而易见的,特别是质量范围为~6.0kDa的毒素。在所有毒液中均检测到透明质酸酶和蛋白水解活性,除了毒素Tx1和Tx2-6的同种型。所有Tx1同工型都阻断了Nav1.6离子电流,略有不同。
    未经批准:我们的研究结果表明,Pn-V,Pe-V和Pp-V在蛋白质组成和酶活性方面非常相似,含有具有高度序列同源性的相同毒素的同种型,小修改。然而,这些结构和功能的变化对毒液的多样性非常重要。此外,我们的发现将有助于理解Phoneutria属其他物种毒液的分子多样性,暴露其生物技术潜力作为寻找新活性分子的来源。
    UNASSIGNED: Spider venoms induce different physio-pharmacological effects by binding with high affinity on molecular targets, therefore being of biotechnological interest. Some of these toxins, acting on different types of ion channels, have been identified in the venom of spiders of the genus Phoneutria, mainly from P. nigriventer. In spite of the pharmaceutical potential demonstrated by P. nigriventer toxins, there is limited information on molecules from venoms of the same genus, as their toxins remain poorly characterized. Understanding this diversity and clarifying the differences in the mechanisms of action of spider toxins is of great importance for establishing their true biotechnological potential. This prompted us to compare three different venoms of the Phoneutria genus: P. nigriventer (Pn-V), P. eickstedtae (Pe-V) and P. pertyi (Pp-V).
    UNASSIGNED: Biochemical and functional comparison of the venoms were carried out by SDS-PAGE, HPLC, mass spectrometry, enzymatic activities and electrophysiological assays (whole-cell patch clamp).
    UNASSIGNED: The employed approach revealed that all three venoms had an overall similarity in their components, with only minor differences. The presence of a high number of similar proteins was evident, particularly toxins in the mass range of ~6.0 kDa. Hyaluronidase and proteolytic activities were detected in all venoms, in addition to isoforms of the toxins Tx1 and Tx2-6. All Tx1 isoforms blocked Nav1.6 ion currents, with slight differences.
    UNASSIGNED: Our findings showed that Pn-V, Pe-V and Pp-V are highly similar concerning protein composition and enzymatic activities, containing isoforms of the same toxins sharing high sequence homology, with minor modifications. However, these structural and functional variations are very important for venom diversity. In addition, our findings will contribute to the comprehension of the molecular diversity of the venoms of the other species from Phoneutria genus, exposing their biotechnological potential as a source for searching for new active molecules.
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  • 文章类型: Journal Article
    Molecules that selectively act on N-methyl-D-aspartate (NMDA) receptors may have a multidirectional effect by modulating the activity of NMDARs, affecting their active sites as well as by changing the composition of their subunits. The results of the clinical trials conducted so far in mood disorders and schizophrenia indicate that such agents may become new effective drugs for the treatment of these diseases. Number of spider neurotoxins e.g. ctenitoxins extracted from Phoneutria sp. venom act as potent and selective NMDAR blockers that do not disturb cortical and hippocampal glutamate signaling, LTP generation and synaptic neurochemistry. Possibly this intriguing kind of promising neuroregulatory peptides and polyamines can be clinically applicable in a wide spectrum of neuropsychiatric disorders, including epilepsy, neurotrauma and ischemic injuries. These novel medications can potentially be helpful in the future treatment of stroke and several neurodegenerative diseases.
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  • 文章类型: Journal Article
    蜘蛛是最丰富的陆地捕食者。尽管它们作为捕食者的功能作用很重要,并且有必要了解它们的饮食以进行保护,许多蜘蛛物种的营养生态学尚未得到充分研究。在流浪蜘蛛的情况下,PhoneutriaboliviensisF.O.Pickard-Cambridge,1897年,只有关于他们饮食的实地和实验室观察研究存在。通过使用DNA元编码方法,我们比较了三个遥远的哥伦比亚人口中雄性和雌性肠道中的猎物。通过细胞色素C氧化酶亚基I(COI)的DNA元编码,我们检测并识别了属于96个操作分类单位(OTU)的234个猎物(蜘蛛捕获的个体),作为这个流浪捕食者的猎物。我们的研究结果拓宽了已知的玻利维亚假单胞菌的饮食,至少有75个先前未在野外工作或实验室实验试验中注册的猎物类群。这些结果表明,玻利维亚假单胞菌主要以无脊椎动物为食(双翅目,鳞翅目,鞘翅目,和直翅目),并在小鳞片上机会主义。还观察到两性和种群间的差异。假设猎物偏好在种群之间没有变化,这些差异可能与更高的本地猎物可用性有关。最后,我们建议,DNA元编码可用于评估不同人群的饮食中的细微差异。特别是当无法使用直接观察来建立或量化该领域的捕食记录时。
    Arachnids are the most abundant land predators. Despite the importance of their functional roles as predators and the necessity to understand their diet for conservation, the trophic ecology of many arachnid species has not been sufficiently studied. In the case of the wandering spider, Phoneutria boliviensis F. O. Pickard-Cambridge, 1897, only field and laboratory observational studies on their diet exist. By using a DNA metabarcoding approach, we compared the prey found in the gut content of males and females from three distant Colombian populations of P. boliviensis. By DNA metabarcoding of the cytochrome c oxidase subunit I (COI), we detected and identified 234 prey items (individual captured by the spider) belonging to 96 operational taxonomic units (OTUs), as prey for this wandering predator. Our results broaden the known diet of P. boliviensis with at least 75 prey taxa not previously registered in fieldwork or laboratory experimental trials. These results suggest that P. boliviensis feeds predominantly on invertebrates (Diptera, Lepidoptera, Coleoptera, and Orthoptera) and opportunistically on small squamates. Intersex and interpopulation differences were also observed. Assuming that prey preference does not vary between populations, these differences are likely associated with a higher local prey availability. Finally, we suggest that DNA metabarcoding can be used for evaluating subtle differences in the diet of distinct populations of P. boliviensis, particularly when predation records in the field cannot be established or quantified using direct observation.
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  • 文章类型: Journal Article
    Phoneutria nigriventer venom (PNV) is a complex mixture of toxins exerting multiple pharmacological effects that ultimately result in severe local pain at the site of the bite. It has been proposed that the PNV-induced pain is mediated by both peripheral and central mechanisms. The nociception triggered by PNV is peripherally mediated by the activation of B2, 5-HT4, NMDA, AMPA, NK1, and NK2 receptors, as well as TTXS-Na+, ASIC, and TRPV1 channels. The activation of tachykinin, glutamate and CGRP receptors along with the production of inflammatory mediators are, at least partially, responsible for the central component of pain. Despite its well established pro-nociceptive properties, PNV contains some toxins with antinociceptive activity, which have been studied in the last few years. The toxins ω-CNTX-Pn4a, ω-CNTX-Pn2a, ω-CNTX-Pn3a, κ-CNTX-Pn1a, U7-CNTX-Pn1a, δ-CNTX-Pn1a, and Γ-CNTX-Pn1a from PNV, as well as the semi-synthetic peptide PnPP-19 have been tested in different experimental models of pain showing consistent antinociceptive properties. This review aims to discuss the pro- and antinociceptive actions of PNV and its toxins, highlighting possible mechanisms involved in these apparently dualistic properties.
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  • 文章类型: Journal Article
    背景:Phoneutrianigriventer蜘蛛毒液含有几种富含半胱氨酸的肽毒素,它们作用于不同的离子通道。尽管对其毒液进行了广泛的研究,并描述了几种毒素前体的cDNA序列,这些毒素的基因结构仍然未知。
    方法:通过使用特异性引物的PCR扩增编码三种先前表征的黑曲霉毒素-PnTx1、PnTx2-5和PnTx4(5-5)的前体的基因组区域。克隆PCR片段并测序。将获得的序列与其相应的cDNA序列进行比较。
    结果:获得的PCR片段的大小和对应于编码毒素前体的基因组区域的序列与其cDNA序列相匹配。
    结论:尽管与cDNA序列相比,编码毒素前体的基因组区域有一些核苷酸取代,本工作的结果表明,黑曲霉毒素在其基因序列中不含内含子。
    BACKGROUND: Phoneutria nigriventer spider venom contains several cysteine-rich peptide toxins that act on different ion channels. Despite extensive studies on its venom and description of cDNA sequences of several of its toxin precursors, the gene structure of these toxins remains unknown.
    METHODS: Genomic regions encoding the precursors of three previously characterized P. nigriventer toxins - PnTx1, PnTx2-5 and PnTx4(5-5) - were amplified by PCR using specific primers. PCR fragments were cloned and sequenced. Obtained sequences were compared with their corresponding cDNA sequences.
    RESULTS: The size of PCR fragments obtained and sequences corresponding to genomic regions encoding for the toxin precursors matched their cDNA sequences.
    CONCLUSIONS: Despite a few nucleotide substitutions in the genomic regions encoding for the toxin precursors when compared with cDNA sequences, the results of the present work indicate that P. nigriventer toxins do not contain introns in their genes sequences.
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