Meiofauna

meiofauna
  • 文章类型: Journal Article
    墨西哥湾北部的深水地平线(DWH)漏油事件,发生在2010年1525米深,释放大约5.07亿公升的石油.在2010年和2011年进行了研究航行,以评估石油泄漏对深海动物的初始和后续影响。2010年和2011年,在距井口<1km到近200km的34个站点调查了深海小型海洋类类海体群落组成对DWH溢油的时空响应。与2010年的未受影响地区相比,受影响地区的类harpactic多样性减少的模式在2011年仍然存在。然而,在一些受影响的站点中,希尔的多样性指数(N1)和家庭丰富度在两年中的增加可能表明暂时恢复和环境条件改善的第一信号。对类人猿家族组成的多变量分析显示,2011年的影响持续存在,在类人猿群落中,通过时间(37%)和空间(38%-39%)具有中等较高的周转多样性值。长期宽容家庭在所有年份和地点的持续存在(例如,Ameiridae),快速反应机会主义家庭的急剧减少(例如,Tisbidae),以及更敏感的(例如,外植体科,Canthocamptidae,Cletopsyllidae,和Laophontidae)得出的初步结论是,一些初始恢复信号是明显的。然而,由于影响在2011年仍然很明显,并且由于深海的招募和继任率可能非常缓慢,DWH灾难发生一年后,社区尚未全面恢复。这项研究证实,类钩足类co足类多样性可以准确评估漏油对深海底栖群落的影响,并在漏油事件后更好地了解系统的恢复模式。
    The Deepwater Horizon (DWH) oil spill in the northern Gulf of Mexico, occurred in 2010 at 1525 meters depth, releasing approximately 507 million liters of oil. Research cruises in 2010 and 2011 were conducted to assess the initial and subsequent effects of the oil spill on deep-sea infauna. The spatial-temporal response of the deep-sea meiofaunal harpacticoid community composition to the DWH oil spill was investigated at 34 stations ranging from <1 km to nearly 200 km from the wellhead in 2010 and 2011. The pattern of reduced harpacticoid diversity in impacted zones compared to non-impacted zones in 2010 persisted in 2011. However, an increase in Hill\'s diversity index (N1) and the family richness across the two years in some of the impacted stations could suggest a first signal of a tentative recovery and an improvement of environmental conditions. The multivariate analysis of harpacticoid family composition revealed the persistence of an impact in 2011 with moderately high values of turnover diversity in the harpacticoid communities through time (37%) and space (38% - 39%). The consistent presence in all years and stations of long-term tolerant families (e.g., Ameiridae), the sharp decrease of fast responding opportunistic families (e.g., Tisbidae), and the increase of more sensitive ones (e.g., Ectinosomatidae, Canthocamptidae, Cletopsyllidae, and Laophontidae) lead to the preliminary conclusion that some initial signals of recovery are evident. However, as impacts were still evident in 2011, and because recruitment and succession rates can be extremely slow in the deep sea, full community recovery had not yet occurred one year after the DWH disaster. This study confirmed that harpacticoid copepod family diversity can offer an accurate assessment of oil-spill impacts on deep-sea benthic communities over space and time as well as a better understanding of the recovery mode of the system after an oil spill event.
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  • 文章类型: Journal Article
    北极峡湾生态系统是高度动态的,生物体暴露于各种自然压力下,以及由架子上的水团平流驱动的生产力。底栖动物对这些环境的反应已经使用传统的方法进行了广泛的研究,基于形态学的方法主要集中在大型无脊椎动物上。在这项研究中,我们通过比较形态学和eDNA元编码,分析了冰川介导的干扰对斯瓦尔巴特峡湾底栖动物和底栖动物(小动物和有孔虫)生物多样性的影响。针对后生动物(COI)的三个遗传标记,分析了小型动物(18SV1V2)和有孔虫(18S37f)。计算了α多样性和多变量组成差异的单变量度量,并使用相关分析测试了响应环境梯度的相似性。我们的研究显示了大型动物和底栖动物的形态和分子数据集的分类组成不同。在基于形态学的清单中几乎不存在一些分类组,而在元码数据中却很丰富,反之亦然。总的来说,大型动物形态数据中的物种丰富度和多样性度量高于元编码,和类似的meiofauna。两种方法论方法都显示了对大型动物和大型底栖动物的冰川介导的干扰的不同反应模式。大型动物在峡湾的外部和内部之间的分类组成和α多样性指数方面表现出明显的区别,而底栖动物对峡湾轴的环境变化表现出逐渐变化和更微妙的反应。这两种方法可以看作是相互补充而不是相互替换。形态学方法提供了更准确的更大尺寸的物种清单和更可靠的定量数据,而元编码允许识别在基于形态学的研究中被忽视的不显眼的分类单元。由于不同的分类单元可能对环境变化表现出不同的敏感性,这两种方法都应用于监测北极生态系统中的海洋生物多样性及其对急剧变化的环境条件的响应。
    Arctic fjords ecosystems are highly dynamic, with organisms exposed to various natural stressors along with productivity clines driven by advection of water masses from shelves. The benthic response to these environmental clines has been extensively studied using traditional, morphology-based approaches mostly focusing on macroinvertebrates. In this study we analyse the effects of glacially mediated disturbance on the biodiversity of benthic macrofauna and meiobenthos (meiofauna and Foraminifera) in a Svalbard fjord by comparing morphology and eDNA metabarcoding. Three genetic markers targeting metazoans (COI), meiofauna (18S V1V2) and Foraminifera (18S 37f) were analyzed. Univariate measures of alpha diversity and multivariate compositional dissimilarities were calculated and tested for similarities in response to environmental gradients using correlation analysis. Our study showed different taxonomic composition of morphological and molecular datasets for both macrofauna and meiobenthos. Some taxonomic groups while abundant in metabarcoding data were almost absent in morphology-based inventory and vice versa. In general, species richness and diversity measures in macrofauna morphological data were higher than in metabarcoding, and similar for the meiofauna. Both methodological approaches showed different patterns of response to the glacially mediated disturbance for the macrofauna and the meiobenthos. Macrofauna showed an evident distinction in taxonomic composition and a dramatic cline in alpha diversity indices between the outer and inner parts of fjord, while the meiobenthos showed a gradual change and more subtle responses to environmental changes along the fjord axis. The two methods can be seen as complementing rather than replacing each other. Morphological approach provides more accurate inventory of larger size species and more reliable quantitative data, while metabarcoding allows identification of inconspicuous taxa that are overlooked in morphology-based studies. As different taxa may show different sensitivities to environmental changes, both methods shall be used to monitor marine biodiversity in Arctic ecosystems and its response to dramatically changing environmental conditions.
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  • 文章类型: Journal Article
    小涡轮扁平虫在小型动物中组成多样化的组合。这些动物主要表现出食肉的食性,捕食各种生物,比如甲壳类动物,环节动物,甚至其他微涡轮动物。然而,他们的饮食细节鲜为人知。这项研究代表了对横纹肌进行捕食的第一份文献。从沉积物中提取并进行了活研究。在它的消化道内,观察到其猎物的生殖系统结构并鉴定为属于Phonorhynchopsishaegheni,也是掠夺性的头巾.没有检测到任何其他生物的残留物。这一发现强调了Proseriata作为小型营养网中顶级掠食者的相关性,这一角色值得进一步考虑,超出了先前承认的范围。
    Microturbellarian flatworms comprise a diverse assemblage amongst meiofauna. These animals primarily exhibit carnivorous feeding habits, preying on various organisms, such as crustaceans, annelids and even other microturbellarians. However, details of their diet are poorly known. This study represents the first documentation of a proseriate preying upon a rhabdocoel. The proseriate was extracted from the sediment and studied alive. Within its digestive tract, structures of the reproductive systems of its prey were observed and identified as belonging to Phonorhynchopsishaegheni, a predatory turbellarian as well. No remains of any other organisms were detected. This finding underscores the relevance of Proseriata as top-level predators within the meiofaunal trophic web, a role that warrants further consideration beyond what has been previously acknowledged.
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  • 文章类型: Journal Article
    环境DNA元编码作为生物监测和环境影响评估的时间和成本效益高的工具正在获得动力。然而,它作为基于大型动物形态分析的传统海洋底栖监测的替代品仍然具有挑战性。在这里,我们建议研究小型动物,这在沉积物DNA样本中表现得更好。我们专注于线虫,是最多、最多样化的动物群。我们的目标是评估线虫代谢编码的潜力,以监测与海上石油平台活动相关的影响。为了实现这一目标,我们使用线虫优化标记(18SV1V2-Nema)和通用真核标记(18SV9)区域来分析在北海三个海上石油平台附近收集的252个沉积物DNA样品。对于这两个标记,我们分析了α和β多样性的变化与平台距离和环境变量的关系。我们还根据与石油开采活动相关的选定环境变量定义了三个影响类别,并使用随机森林分类器来比较两个数据集的预测性能。我们的结果表明,线虫的α和β多样性随距平台的距离增加而变化。与平台活动直接相关的变量,例如Ba和THC,强烈影响线虫群落。线虫元编码数据提供比真核数据更可靠的预测模型。此外,线虫群落在时间和空间上显得更加稳定,从同一平台获得的线虫数据集的重叠间隔三年。距离和香农多样性之间的显着负相关也主张V1V2-Nema比V9具有更高的性能。总的来说,这些结果表明,与真核生物群落相比,线虫的敏感性更高。因此,线虫代谢编码有可能成为海洋环境底栖监测的有效工具。
    Environmental DNA metabarcoding is gaining momentum as a time and cost-effective tool for biomonitoring and environmental impact assessment. Yet, its use as a replacement for the conventional marine benthic monitoring based on morphological analysis of macrofauna is still challenging. Here we propose to study the meiofauna, which is much better represented in sediment DNA samples. We focus on nematodes, which are the most numerous and diverse group of meiofauna. Our aim is to assess the potential of nematode metabarcoding to monitor impacts associated with offshore oil platform activities. To achieve this goal, we used nematode-optimized marker (18S V1V2-Nema) and universal eukaryotic marker (18S V9) region to analyse 252 sediment DNA samples collected near three offshore oil platforms in the North Sea. For both markers, we analysed changes in alpha and beta diversity in relation to distance from the platforms and environmental variables. We also defined three impact classes based on selected environmental variables that are associated with oil extraction activities and used random forest classifiers to compare the predictive performance of both datasets. Our results show that alpha- and beta-diversity of nematodes varies with the increasing distance from the platforms. The variables directly related to platform activity, such as Ba and THC, strongly influence the nematode community. The nematode metabarcoding data provide more robust predictive models than eukaryotic data. Furthermore, the nematode community appears more stable in time and space, as illustrated by the overlap of nematode datasets obtained from the same platform three years apart. A significative negative correlation between distance and Shannon diversity also advocates for higher performance of the V1V2-Nema over the V9. Overall, these results suggest that the sensitivity of nematodes is higher compared to the eukaryotic community. Hence, nematode metabarcoding has the potential to become an effective tool for benthic monitoring in marine environment.
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  • 文章类型: Journal Article
    在实验室中进行了为期4周的田间沉积物和其他富含有机物的实验,评估了有机物对小型动物和线虫的富集作用。此外,每个都监测溶解氧(DO)和pH。meiofaunal类群和线虫的丰度和多样性各不相同。在DO和研究项目之间发现了很强的显着相关性。线虫是田间沉积物和其他实验沉积物中最丰富的组;它们的计数随着有机富集的增加而增加,并以沉积物馈线为主。两栖动物,Ostracoda和捕食者/杂食线虫在高度富含有机物的沉积物中消失了。DO和有机富集的变化可能是下底栖组合改变的更多原因。Nematoda的一般组成为环境变化提供了很好的指标。
    The organic enrichment effects on the meiofauna and nematofauna were assessed for field sediment and other experimental ones enriched with organic matters conducted in the laboratory for 4 weeks. Also, dissolved oxygen (DO) and pH were monitored for each one. The abundance and diversity of meiofaunal groups and nematofauna varied. Strong significant correlations were found between DO and the studied items. Nematoda was the most abundant group in the field sediment and other experimental ones; their counts increased with the increase in organic enrichments and were dominated by deposit feeders. Amphipoda, Ostracoda and predator/omnivore nematodes disappeared in highly organic-enriched sediments. Changes in DO and organic enrichments might be the more attributable reasons for the alteration of the meiobenthic assemblages. The generic compositions of Nematoda provide a good indicator for environmental alterations.
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  • 文章类型: Journal Article
    作为“生态系统工程师”,海狸影响河流水文,地貌学,生物化学,和生物组合。然而,缺乏关于海狸活动对淡水小型动物群的影响的研究。在这项研究中,我们调查了台伯河(意大利)海狸坝的一段底栖co足类组合的分类学和功能组成,在我们调查前大约7周创建的,在大坝的上游形成了半封闭的栖息地,在大坝的下游形成了封闭的栖息地。我们还分析了破坏海狸大坝的洪水事件前后的co足类组合,提供了一个独特的机会来观察自然逆转场景中的变化。我们的分析显示,虽然在最近形成的半体性和洛蒂生境中,co足类组合的分类学组成和功能特征在很大程度上保持不变,大坝状态和未大坝状态之间存在明显差异。受坝状态显示co足类丰度较低,生物量,和功能比未受阻碍的功能。这些结果突显了海狸水坝在改变小型动物组合的组成和功能中的作用,从而深入了解了水生生态系统内部的动态相互作用。
    As known \"ecosystem engineers\", beavers influence river hydrology, geomorphology, biochemistry, and biological assemblages. However, there is a lack of research regarding the effects of beaver activities on freshwater meiofauna. In this study, we investigated the taxonomic and functional composition of the benthic copepod assemblage of a segment of the Tiber River (Italy) where a beaver dam, created about 7 weeks before our survey, had formed a semi-lentic habitat upstream and a lotic habitat downstream of the dam. We also analyzed the copepod assemblage before and after a flood event that destroyed the beaver dam, providing a unique opportunity to observe changes in a naturally reversing scenario. Our analyses revealed that, while the taxonomic composition and functional traits of the copepod assemblage remained largely unchanged across the recently formed semi-lentic and lotic habitats, substantial differences were evident between the dammed and undammed states. The dammed state showed lower copepod abundances, biomass, and functionality than the undammed one. These results highlight the role of beaver dams in changing the composition and functionality of meiofaunal assemblages offering insights into the dynamic interactions within aquatic ecosystems.
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  • 文章类型: Journal Article
    深水地平线(DWH)井喷和漏油事件于2010年4月20日在墨西哥湾北部(NGOM)深海(1525m)开始。先前的研究记录了深海底的受影响面积总计321平方公里,并且是基于大型动物区系和大型动物区系的主要分类学水平。在本研究中,采用了meiofauna群落的更精细的分类学分辨率,特别是类钩足类co足类生物多样性。在95个采样站中,有35个观察到了对harpacticoid家族生物多样性的严重或中度影响。估计面积为2864平方公里,受影响面积比以前报告的面积大8.9倍。在影响区观察到敏感和耐受的类尖晶石家族。本研究极大地扩展了对2010年DWH深海影响的理解,并表明harpacticoid家族级响应是这次漏油污染事件的最敏感指标(迄今为止已报告)。
    The Deepwater Horizon (DWH) blowout and oil spill began on April 20, 2010 in the northern Gulf of Mexico (NGOM) deep sea (1525 m). Previous studies documented an impacted area of deep-sea floor totaling 321 km2 and were based on taxonomy at the macrofauna family level and the meiofauna major taxonomic level. In the present study, finer taxonomic resolution of the meiofauna community was employed, specifically harpacticoid copepod family biodiversity. Severe or moderate impacts to harpacticoid family biodiversity were observed at 35 of 95 sampling stations, covering an estimated area of 2864 km2, 8.9 times greater impacted area than previously reported. Sensitive and tolerant harpacticoid families were observed in the impact zone. The present study greatly expands the understanding of DWH deep-sea impacts in 2010 and demonstrates that the harpacticoid family-level response is the most sensitive indicator (reported to date) of this oil spill pollution event.
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  • 文章类型: Journal Article
    18S-V4条形码的<3%不同的扩增子序列变异体(ASV)簇被用作物种代理,用于评估ASV组成和ASV多样性指数,这些指数表征了迄今为止对东南部未充分调查的小型群落的特征。黎凡特盆地。伴随着丰度测量,解释了这些特征与沉积和底部地形参数的关系。社区构成概况的构建,即ASV列表及其估计丰度,是使用我们以前建立的程序完成的(Harbuzov等人。,2022,MarineGenomics65,100980),通过丰富的硬体meiofaunal分类群,将元编码与样本读数归一化相结合。研究省包括54-1418米的深度范围,跨越垂直底部的水平范围为0-17厘米。氧气,孔隙水中的硫化氢和甲烷浓度,以及沉积物粒度谱和沉积蛋白质和碳水化合物水平,被测量,其次是对他们参与塑造meiofaunal社区特征的评估。群落组成通常取决于地点和地平线,其丰度随着底部深度和底部地层的增加而减少,典型的底栖栖息地,这些栖息地由富营养带的有机碳营养。位于以色列海岸北部的相对急剧倾斜的大陆坡底部是一个例外。据推测,其深层群落特征受到强烈的沉积物混合和从架子上横向运输食物的影响,除了来自富营养区的食物来源的影响。
    The <3% dissimilar Amplicon Sequence Variant (ASV) clusters of the 18S-V4 barcode were used as species-proxies for the evaluation of ASV composition and ASV diversity indices characterizing the hitherto poorly investigated meiofaunal communities of the south-eastern part of the Levantine basin. Accompanied by abundance measurements, the relationships of these characteristics with sedimentary and bottom terrain parameters were interpreted. The construction of community composition profiles, namely ASVs\' list and their estimated abundances, was done using our previously established procedure (Harbuzov et al., 2022, Marine Genomics 65, 100980), combining metabarcoding with sample reads normalization by the abundance of hard-bodied meiofaunal taxa. The study province included the 54-1418 m depth range, across vertical sub-bottom horizons ranging 0-17 cm. Oxygen, hydrogen sulfide and methane concentrations in the pore water, as well as sediment grain size spectra and sedimentary protein and carbohydrate levels, were measured, followed by an evaluation of their involvement in the shaping of the meiofaunal communities\' characteristics. Community composition was generally site-and-horizon dependent and its abundance decreased with increasing bottom depth and across sub-bottom horizons, typical to benthic habitats which are nourished by organic carbon from the euphotic zone. The relatively sharply inclined continental slope bottom located in the northern part of the Israeli coast was an exception. Its meiofaunal community characteristics were speculated to be affected by intensive sediment mixing and lateral transport of food from the shelf, in addition to the effect of the euphotic zone-originated food sources.
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  • 文章类型: Journal Article
    背景:主要是殖民地的苔藓虫最特殊的类群之一是类群Monobryozoon,他的名字已经暗示了门的非殖民地成员。它的特殊性和非常不寻常的生活方式,作为生活在沙粒上的中土进化枝,吸引了许多生物学家。特别是它与其他苔藓虫的系统关系仍然是个谜。尽管在其类型的地点Helgoland搜索了大量的M.ambulans,一个拥有长期海洋站和众多课程和讲习班传统的地方,直到今天,它从未被重遇。在这里,我们报告了这个几乎是神话物种的第一个观察结果,Monobryozoon救护车。
    结果:自1938年以来,我们首次提出新的现代,该物种的形态学分析以及有史以来的第一个分子数据。我们详细的形态学分析证实了以前的大多数描述,而且还可以确定特殊的动态多形动物的存在。我们认为这些是芽生前,最终与动物连续分离,使其成为伪殖民地。其余的形态数据显示与青霉苔藓苔藓虫有很强的联系。我们的形态学数据与系统基因组分析一致,将其与Alcionidium物种聚集在一起,作为多孔ctenostomes的姐妹组。发散时间估计和祖先状态重建将M.ambulans的孤立状态恢复为可能在白垩纪晚期进化的衍生特征。在这项研究中,我们还提供了完整的M.ambulans的有丝分裂基因组,尽管暂时缺乏可比较的数据,但它为未来的比较方面提供了独特和稀有物种的重要数据。
    结论:我们能够提供独特苔藓动物的第一个序列数据和现代形态数据,M.救护车,它们都支持ctenostome苔藓虫中的alcyonioidean关系。
    BACKGROUND: One of the most peculiar groups of the mostly colonial phylum Bryozoa is the taxon Monobryozoon, whose name already implies non-colonial members of the phylum. Its peculiarity and highly unusual lifestyle as a meiobenthic clade living on sand grains has fascinated many biologists. In particular its systematic relationship to other bryozoans remains a mystery. Despite numerous searches for M. ambulans in its type locality Helgoland, a locality with a long-lasting marine station and tradition of numerous courses and workshops, it has never been reencountered until today. Here we report the first observations of this almost mythical species, Monobryozoon ambulans.
    RESULTS: For the first time since 1938, we present new modern, morphological analyses of this species as well as the first ever molecular data. Our detailed morphological analysis confirms most previous descriptions, but also ascertains the presence of special ambulatory polymorphic zooids. We consider these as bud anlagen that ultimately consecutively separate from the animal rendering it pseudo-colonial. The remaining morphological data show strong ties to alcyonidioidean ctenostome bryozoans. Our morphological data is in accordance with the phylogenomic analysis, which clusters it with species of Alcyonidium as a sister group to multiporate ctenostomes. Divergence time estimation and ancestral state reconstruction recover the solitary state of M. ambulans as a derived character that probably evolved in the Late Cretaceous. In this study, we also provide the entire mitogenome of M. ambulans, which-despite the momentary lack of comparable data-provides important data of a unique and rare species for comparative aspects in the future.
    CONCLUSIONS: We were able to provide first sequence data and modern morphological data for the unique bryozoan, M. ambulans, which are both supporting an alcyonidioidean relationship within ctenostome bryozoans.
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  • 文章类型: Journal Article
    Laophontidae是一个非常大且多样化的家族,在Harpacticoida中包含320多个物种和74属。根据直到最近公布的记录,据报道,朝鲜水域出现了12属Laophontidae的25种。韩国水域中最常见的laophontid物种是Paralaophontecongenea(Sars,1908).在对东海朝鲜海岸附近潮下带的中底栖群落的研究中,我们发现了Laophontidae家族的一个未描述的属。Laophontidae家族的这种未描述标本的特征与任何现有属都不匹配。
    这里,间质海洋底栖co足类科LaophontidaeT.Scott的一个新属,1905是从韩国东海岸Hupo港口附近的潮下带描述的。该属被命名为Strictlaophontegen。11月。并被归类为Laophontidae家族。这是基于七个分段的雌性触角的存在,减少了天线外脚架,从第二支腿到第四支腿没有内刚毛的第一内足节段和具有在基部不融合的不同外足的P5。Strictlaophontegen的显着特征。11月。P5外足只有四个刚毛,P1外脚架具有两个区段并且天线外脚架具有四个刚毛。特别是,这个新属具有独特的特征,因为尾rami彼此紧密相连。
    UNASSIGNED: The Laophontidae is a very large and diverse family containing more than 320 species and 74 genera in the Harpacticoida. According to records published until recently, 25 species of 12 genera of Laophontidae were reported to appear in Korean waters. The most common laophontid species in Korean waters is Paralaophontecongenera (Sars, 1908). During research on the meiobenthic community in the subtidal zone near the Korean coast in the East Sea, we found an undescribed genus of the Laophontidae family. The character traits of this undescribed specimen of the Laophontidae family do not match any existing genus.
    UNASSIGNED: Herein, a new genus of the interstitial marine benthic copepods family Laophontidae T. Scott, 1905 is described from the subtidal zone near Hupo Harbour on the east coast of Korea. This genus was named Strictlaophonte gen. nov. and has been classified into the family Laophontidae. This was based on the presence of seven segmented female antennules, reduced antennary exopod, first endopodal segments having no inner setae from the second leg to the fourth leg and P5 with a distinct exopod that is not fused at the basis. The distinguishing features of Strictlaophonte gen. nov. are P5 exopod having only four setae, the P1 exopod having two segments and the antenna exopod having four setae. In particular, this new genus has unique characteristics in that the caudal rami are very tightly attached to each other.
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