MR analysis

  • 文章类型: Published Erratum
    [这更正了文章DOI:10.3389/fneur.2023.1283286。].
    [This corrects the article DOI: 10.3389/fneur.2023.1283286.].
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  • 文章类型: Journal Article
    目的:探讨肝酶与卵巢癌(OC)的关系。并验证其作为生物标志物的潜力及其在OC中的作用机制。方法对OC和碱性磷酸酶(ALP)等酶水平进行全基因组关联研究,天冬氨酸转氨酶(AST),丙氨酸转氨酶,和γ-谷氨酰转移酶进行了分析。单变量和多变量孟德尔随机化(MR),在施泰格试验的补充下,鉴定出与OC有潜在因果关系的酶。来自GSE130000数据集的单细胞转录组学精确定位的关键细胞簇,能够进一步检查酶编码基因的表达。预测控制这些基因的转录因子(TF)构建TF-mRNA网络。此外,回顾性分析健康个体和OC患者的肝酶水平,同时评估与癌症抗原125(CA125)和人附睾蛋白4(HE4)的相关性。
    结果:共有283个单核苷酸多态性(SNPs)和209个与ALP和AST相关的SNPs,分别。使用逆方差加权方法,单因素MR(UVMR)分析显示ALP(P=0.050,OR=0.938)和AST(P=0.017,OR=0.906)与OC风险呈负相关,表明它们作为保护因素的作用。多变量MR(MVMR)证实了ALP对OC的因果关系(P=0.005,OR=0.938),而没有反向因果关系。关键细胞簇,包括T细胞,卵巢细胞,内皮细胞,巨噬细胞,癌症相关成纤维细胞(CAFs),并鉴定了上皮细胞,上皮细胞显示高表达编码AST和ALP的基因。值得注意的是,TFs如TCE4与GOT2和ALPL基因的调控有关。OC患者样本显示血液和肿瘤组织中ALP水平降低,观察到ALP和CA125水平之间呈负相关。
    结论:这项研究建立了AST和ALP与OC之间的因果关系,将其视为保护因素。编码这些酶的基因在上皮细胞中的表达增加为开发新型疾病标志物和OC的靶向治疗提供了理论基础。
    OBJECTIVE: To investigate the association between liver enzymes and ovarian cancer (OC), and to validate their potential as biomarkers and their mechanisms in OC. Methods Genome-wide association studies for OC and levels of enzymes such as Alkaline phosphatase (ALP), Aspartate aminotransferase (AST), Alanine aminotransferase, and gamma-glutamyltransferase were analyzed. Univariate and multivariate Mendelian randomization (MR), complemented by the Steiger test, identified enzymes with a potential causal relationship to OC. Single-cell transcriptomics from the GSE130000 dataset pinpointed pivotal cellular clusters, enabling further examination of enzyme-encoding gene expression. Transcription factors (TFs) governing these genes were predicted to construct TF-mRNA networks. Additionally, liver enzyme levels were retrospectively analyzed in healthy individuals and OC patients, alongside the evaluation of correlations with cancer antigen 125 (CA125) and Human Epididymis Protein 4 (HE4).
    RESULTS: A total of 283 single nucleotide polymorphisms (SNPs) and 209 SNPs related to ALP and AST, respectively. Using the inverse-variance weighted method, univariate MR (UVMR) analysis revealed that ALP (P = 0.050, OR = 0.938) and AST (P = 0.017, OR = 0.906) were inversely associated with OC risk, suggesting their roles as protective factors. Multivariate MR (MVMR) confirmed the causal effect of ALP (P = 0.005, OR = 0.938) on OC without reverse causality. Key cellular clusters including T cells, ovarian cells, endothelial cells, macrophages, cancer-associated fibroblasts (CAFs), and epithelial cells were identified, with epithelial cells showing high expression of genes encoding AST and ALP. Notably, TFs such as TCE4 were implicated in the regulation of GOT2 and ALPL genes. OC patient samples exhibited decreased ALP levels in both blood and tumor tissues, with a negative correlation between ALP and CA125 levels observed.
    CONCLUSIONS: This study has established a causal link between AST and ALP with OC, identifying them as protective factors. The increased expression of the genes encoding these enzymes in epithelial cells provides a theoretical basis for developing novel disease markers and targeted therapies for OC.
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  • 文章类型: Journal Article
    癫痫是全球最普遍的严重脑部疾病之一,影响了7000多万人。观察性研究越来越认识到血浆脂质组对癫痫的影响。然而,由于固有的混杂因素和反向因果关系的复杂性,在血浆脂质组和癫痫之间建立直接的因果关系仍然难以捉摸.本研究旨在探讨血浆特异性脂质组与癫痫的因果关系,以及他们的中间调解人。
    我们进行了两个样本的孟德尔随机化(MR)和调解MR分析,以评估179种血浆脂质和癫痫的因果关系,基于全基因组关联研究,重点关注炎性细胞因子作为潜在的介质。主要的方法论方法是利用方差逆加权,辅之以一系列其他估计器。一组敏感性分析,包括Cochran的Q测试,I2统计,MR-Egger截距测试,进行了MR-PRESSO全局检验和留一灵敏度分析,以评估稳健性,结果的异质性和水平多效性。
    我们的发现显示磷脂酰胆碱(18:1_18:1)水平与癫痫风险呈正相关(OR=1.105,95%CI:1.036-1.178,p=0.002)。值得注意的是,我们的调解MR结果提出肿瘤坏死因子配体超家族成员12水平(TNFSF12)作为磷脂酰胆碱(18,1_18:1)水平与癫痫风险之间关系的介质,解释调解比例为4.58%[调解效果:(b=0.00455,95%CI:-0.00120-0.01030),Z=1.552]。
    我们的研究证实了磷脂酰胆碱(18:1_18:1)水平与癫痫之间的遗传因果关系,强调TNFSF12的潜在中介作用,并为今后癫痫的临床研究提供有价值的见解.
    UNASSIGNED: Epilepsy is one of the most prevalent serious brain disorders globally, impacting over 70 million individuals. Observational studies have increasingly recognized the impact of plasma lipidome on epilepsy. However, establishing a direct causal link between plasma lipidome and epilepsy remains elusive due to inherent confounders and the complexities of reverse causality. This study aims to investigate the causal relationship between specific plasma lipidome and epilepsy, along with their intermediary mediators.
    UNASSIGNED: We conducted a two-sample Mendelian randomization (MR) and mediation MR analysis to evaluate the causal effects of 179 plasma lipidomes and epilepsy, with a focus on the inflammatory cytokine as a potential mediator based on the genome-wide association study. The primary methodological approach utilized inverse variance weighting, complemented by a range of other estimators. A set of sensitivity analyses, including Cochran\'s Q test, I 2 statistics, MR-Egger intercept test, MR-PRESSO global test and leave-one-out sensitivity analyses was performed to assess the robustness, heterogeneity and horizontal pleiotropy of results.
    UNASSIGNED: Our findings revealed a positive correlation between Phosphatidylcholine (18:1_18:1) levels with epilepsy risk (OR = 1.105, 95% CI: 1.036-1.178, p = 0.002). Notably, our mediation MR results propose Tumor necrosis factor ligand superfamily member 12 levels (TNFSF12) as a mediator of the relationship between Phosphatidylcholine (18,1_18:1) levels and epilepsy risk, explaining a mediation proportion of 4.58% [mediation effect: (b = 0.00455, 95% CI: -0.00120-0.01030), Z = 1.552].
    UNASSIGNED: Our research confirms a genetic causal relationship between Phosphatidylcholine (18:1_18:1) levels and epilepsy, emphasizing the potential mediating role of TNFSF12 and provide valuable insights for future clinical investigations into epilepsy.
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  • 文章类型: Journal Article
    为了研究免疫细胞对子宫内膜异位症(EMS)的因果关系,我们进行了孟德尔随机化分析.
    孟德尔随机化(MR)使用遗传变异作为工具变量来研究暴露对观察数据结果的因果影响。在这项研究中,我们进行了全面的双样本MR分析,以研究731个免疫细胞与子宫内膜异位症之间的因果关系.我们使用补充孟德尔随机化(MR)方法,包括加权中位数估计器(WME)和逆方差加权(IVW),并进行敏感性分析以评估我们结果的稳健性。
    已发现四种免疫表型与发展EMS:B细胞百分比淋巴细胞的风险显着相关(WME:OR:1.074,p=0.027和IVW:OR:1.058,p=0.008),MoMDSC上的CD14(WME:OR:1.056,p=0.021,IVW:OR:1.047,p=0.021),CD14+CD16-单核细胞百分比(WME:OR:0.947,p=0.024,IVW:OR:0.958,p=0.011),未缝合mem上的CD25(WME:OR:1.055,p=0.030,IVW:OR:1.048,p=0.003)。敏感性分析证实了主要发现,证明分析之间的一致性。
    我们的MR分析为免疫细胞和EMS之间的直接因果关系提供了令人信服的证据。从而提高我们对这种疾病的认识。它也为未来免疫调节治疗策略的发展提供了新的途径和机会。
    UNASSIGNED: To investigate the causal effect of immune cells on endometriosis (EMS), we performed a Mendelian randomization analysis.
    UNASSIGNED: Mendelian randomization (MR) uses genetic variants as instrumental variables to investigate the causal effects of exposures on outcomes in observational data. In this study, we conducted a thorough two-sample MR analysis to investigate the causal relationship between 731 immune cells and endometriosis. We used complementary Mendelian randomization (MR) methods, including weighted median estimator (WME) and inverse variance weighted (IVW), and performed sensitivity analyses to assess the robustness of our results.
    UNASSIGNED: Four immune phenotypes have been found to be significantly associated with the risk of developing EMS: B cell %lymphocyte (WME: OR: 1.074, p = 0.027 and IVW: OR: 1.058, p = 0.008), CD14 on Mo MDSC (WME: OR: 1.056, p =0.021 and IVW: OR: 1.047, p = 0.021), CD14+ CD16- monocyte %monocyte (WME: OR: 0.947, p = 0.024 and IVW: OR: 0.958, p = 0.011), CD25 on unsw mem (WME: OR: 1.055, p = 0.030 and IVW: OR: 1.048, p = 0.003). Sensitivity analyses confirmed the main findings, demonstrating consistency across analyses.
    UNASSIGNED: Our MR analysis provides compelling evidence for a direct causal link between immune cells and EMS, thereby advancing our understanding of the disease. It also provides new avenues and opportunities for the development of immunomodulatory therapeutic strategies in the future.
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  • 文章类型: Journal Article
    气道过敏性疾病(AAD)是一类以Th2型炎症为主的自身免疫性疾病,主要包括过敏性鼻炎(AR),过敏性哮喘(AS),慢性鼻窦炎(CRS)。免疫细胞与AAD之间存在非常复杂的调控机制;以前的报道发现,相同的免疫细胞在AAD中的功能并不相同。
    这项研究的目的是探索不同表型免疫细胞之间的因果关系及其与AAD的关联。
    利用公开的全基因组关联研究(GWAS)数据库,这项研究进行了双向孟德尔随机化(MR),以评估731种不同免疫表型的免疫细胞与AAD之间的因果关系。主要的评估方法包括方差倒数加权,加权中位数,还有Egger先生.此外,敏感性分析,如MR-PRESSO,leave-one-out,采用散点图消除异质性和多效性的干扰,确保因果推理的稳定性。
    共发现38个具有不同免疫表型的免疫细胞与AR呈正相关和因果关系,其中26个是保护因素,12个是危险因素。33个免疫细胞与AS呈正相关,其中14个是保护因素,19个是危险因素,以及39个免疫细胞和CRS,其中22个是保护因素,17个是危险因素。最后,这三种疾病的所有相关免疫细胞的结果都被采集并相交,发现CD39激活的Treg上的CD3(IVWAR=0.001,IVWCRS=0.043,IVWAS=0.027)可能是抑制AAD发展的关键免疫细胞(ORAR=0.940,ORAS=0.967,ORCRS=0.976)。
    本研究揭示免疫细胞的不同免疫表型在基因水平上与AAD密切相关,为今后的临床研究提供了理论依据。
    UNASSIGNED: Airway allergic disease (AAD) is a class of autoimmune diseases with predominantly Th2-type inflammation, mainly including allergic rhinitis (AR), allergic asthma (AS), and chronic sinusitis (CRS). There are very complex regulatory mechanisms between immune cells and AAD; however, previous reports found that the functions of the same immune cells in AAD are not identical.
    UNASSIGNED: The aim of this study was to explore the causal relationship between different phenotypic immune cells and their association with AAD.
    UNASSIGNED: Utilizing the publicly available Genome-Wide Association Studies (GWAS) database, this study conducted a bidirectional Mendelian randomization (MR) to assess the causal relationship between immune cells of 731 different immunophenotypes and AAD. The primary assessment methods included inverse variance weighting, weighted median, and MR Egger. Additionally, sensitivity analyses such as MR-PRESSO, leave-one-out, and scatter plots were employed to eliminate the interference of heterogeneity and pleiotropy, ensuring the stability of the causal inference.
    UNASSIGNED: A total of 38 immune cells with different immunophenotypes were found to be positively and causally associated with AR, of which 26 were protective factors and 12 were risk factors. Positive associations were found between 33 immune cells and AS, of which 14 were protective factors and 19 were risk factors, as well as between 39 immune cells and CRS, of which 22 were protective factors and 17 were risk factors. Finally, the results of all relevant immune cells for the three diseases were taken and intersected, and it was found that CD3 on CD39+-activated Treg (IVWAR = 0.001, IVWCRS = 0.043, IVWAS = 0.027) may be the key immune cell that inhibits the development of AAD (ORAR = 0.940, ORAS = 0.967, ORCRS = 0.976).
    UNASSIGNED: This study reveals that different immune phenotypes of immune cells are closely related to AAD at the genetic level, which provides a theoretical basis for future clinical studies.
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  • 文章类型: Journal Article
    视网膜是高度代谢活跃的组织,代谢产物与糖尿病视网膜病变(DR)之间的关系尚不清楚。这项研究使用了双样本双向孟德尔随机化(MR)分析来确定代谢物与DR之间的因果关系。
    从开放获取的全基因组关联研究(GWAS)摘要数据库中选择遗传变异作为最近发表的1400种代谢物的代理。进行MR分析以检查这些代谢物性状与DR之间的关联。通过关联分析筛选与暴露显著相关的单核苷酸多态性(SNP)数据。通过去除具有连锁不平衡(LD)和低于10的F统计值的SNP,获得了验证的工具变量(IV)。使用逆方差加权(IVW)方法作为主要方法进行MR分析。通过敏感性分析验证了结果的稳健性,包括对异质性的评估,水平多效性,和留一法。
    在IVW方法和几种敏感性分析的初步分析中,遗传决定的硫酸糖硫胆酸盐水平,雄烯二醇(3β,17β)单硫酸盐(1)水平,1-硬脂酰-2-花生四酰基-GPE(18:0/20:4)水平,1-油酰基-2-花生四酰基-GPE(18:1/20:4)水平,1-油酰基-2-亚油酰基-GPE(18:1/18:2)水平,X-26109级,N6-甲基赖氨酸水平,(N6,N6-二甲基赖氨酸水平),和(N2-乙酰基,N6,N6-二甲基赖氨酸水平)与DR的风险呈负相关。5-羟甲基-2-呋喃酰基肉碱水平和谷氨酸与丙氨酸的比率与DR的风险呈正相关。在DR和代谢物之间没有发现反向因果关联。
    这项MR研究表明,九种代谢物可能对DR具有保护作用,而两种代谢物可能与DR的风险增加有关。然而,需要进一步的研究来证实这些发现.补充有益的代谢物可以降低DR风险,并且可能是DR治疗的一种新的治疗方法。
    UNASSIGNED: The retina is a highly metabolically active tissue, and there is a lack of clarity about the relationship between metabolites and diabetic retinopathy (DR). This study used two-sample bidirectional Mendelian randomization (MR) analyses to identify causal relationships between metabolites and DR.
    UNASSIGNED: Genetic variants were selected from the open-access Genome-Wide Association Studies (GWAS) summary database as proxies for the 1400 most recently published metabolites. MR analysis was performed to examine associations between these metabolite traits and DR. Single nucleotide polymorphism (SNP) data that were significantly associated with exposure were screened through association analysis. Validated instrumental variables (IVs) were obtained by removing SNPs with linkage disequilibrium (LD) and F-statistic values below 10. MR analyses were performed using the inverse variance weighted (IVW) method as the primary approach. The robustness of the results was verified by sensitivity analyses, including assessments of heterogeneity, horizontal pleiotropy, and the leave-one-out method.
    UNASSIGNED: In the IVW approach and in the primary analysis of several sensitivity analyses, genetically determined glycolithocholate sulfate levels, androstenediol (3 beta, 17 beta) monosulfate (1) levels, 1-stearoyl-2-arachidonoyl-GPE (18:0/20:4) levels, 1-oleoyl-2-arachidonoyl-GPE (18:1/20:4) levels, 1-oleoyl-2-linoleoyl-GPE (18:1/18:2) levels, X-26109 levels, N6-methyllysine levels, (N6,N6-dimethyllysine levels), and (N2-acetyl,N6,N6-dimethyllysine levels) were negatively associated with the risk of DR. 5-hydroxymethyl-2-furoylcarnitine levels and the glutamate-to-alanine ratio were positively associated with the risk of DR. No reverse causal association was found between DR and metabolites.
    UNASSIGNED: This MR study suggests that nine metabolites may have a protective effect in DR, while two metabolites may be associated with an increased risk of DR. However, further research is needed to confirm these findings. Supplementation with beneficial metabolites may reduce DR risk and could potentially be a novel therapeutic approach to DR treatment.
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  • 文章类型: Journal Article
    先前的研究强调了某些炎性细胞因子与梅尼埃病(MD)之间的关联。如白细胞介素(IL)-13和IL-1β。孟德尔随机化旨在全面评估91种炎性细胞因子与MD之间的因果关系。
    进行了全面的双样本孟德尔随机化(MR)分析,以确定炎性细胞因子与MD之间的因果关系。利用可公开访问的遗传数据集,我们探讨了91种炎性细胞因子与MD风险之间的因果关系.采用综合敏感性分析来评估稳健性,异质性,以及我们发现中存在水平多效性。
    我们的研究结果表明,MD对两种细胞因子的水平有因果关系:IL-10(P=0.048,OR=0.945,95CI=0.894〜1.000)和Neurotrophin-3(P=0.045,OR=0954,95CI=0.910〜0.999)。此外,三种细胞因子对MD表现出显著的因果效应:CD40L受体(P=0.008,OR=0.865,95CI=0.777-0.963),δ和Notch样表皮生长因子相关受体(DNER)(P=0.010,OR=1.216,95CI=1.048-1.412),STAM结合蛋白(P=0.044,OR=0.776,95CI=0.606-0.993)。
    这项研究表明,CD40L受体,DNER,和STAM结合蛋白可能作为MD的上游决定因素。此外,我们的结果表明,当MD被视为MR分析中的暴露变量时,它可能与IL-10和神经营养蛋白-3水平升高有因果关系。使用这些细胞因子进行MD诊断或作为潜在的治疗靶标具有重要的临床意义。
    UNASSIGNED: Previous studies have highlighted associations between certain inflammatory cytokines and Ménière\'s Disease (MD), such as interleukin (IL) -13 and IL-1β. This Mendelian randomization aims to comprehensively evaluate the causal relationships between 91 inflammatory cytokines and MD.
    UNASSIGNED: A comprehensive two-sample Mendelian randomization (MR) analysis was conducted to determine the causal association between inflammatory cytokines and MD. Utilizing publicly accessible genetic datasets, we explored causal links between 91 inflammatory cytokines and MD risk. Comprehensive sensitivity analyses were employed to assess the robustness, heterogeneity, and presence of horizontal pleiotropy in our findings.
    UNASSIGNED: Our findings indicate that MD causally influences the levels of two cytokine types: IL-10 (P=0.048, OR=0.945, 95%CI =0.894~1.000) and Neurotrophin-3 (P=0.045, OR=0954, 95%CI =0.910~0.999). Furthermore, three cytokines exhibited significant causal effects on MD: CD40L receptor (P=0.008, OR=0.865, 95%CI =0.777-0.963), Delta and Notch-like epidermal growth factor-related receptor (DNER) (P=0.010, OR=1.216, 95%CI =1.048-1.412), and STAM binding protein (P=0.044, OR=0.776, 95%CI =0.606-0.993).
    UNASSIGNED: This study suggests that the CD40L receptor, DNER, and STAM binding protein could potentially serve as upstream determinants of MD. Furthermore, our results imply that when MD is regarded as the exposure variable in MR analysis, it may causally correlate with elevated levels of IL-10 and Neurotrophin-3. Using these cytokines for MD diagnosis or as potential therapeutic targets holds great clinical significance.
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  • 文章类型: Journal Article
    胶质母细胞瘤(GBM)是一种高度恶性的脑肿瘤,免疫细胞在其启动和发展中起着至关重要的作用。免疫系统的细胞成分,包括各种类型的淋巴细胞,巨噬细胞,和树突状细胞,其中,与GBM进行复杂的互动。然而,这些相互作用的确切性质仍有待最终确定。
    在这项研究中,我们进行了一项全面的双样本孟德尔随机化(MR)分析,以阐明免疫细胞特征与GBM发病率之间的因果关系.利用公开的遗传数据,我们调查了731种免疫细胞特征与GBM风险之间的因果关系.随后,我们进行了反向孟德尔随机化分析以排除反向因果关系.最后,结论免疫细胞的三种亚型与GBM之间存在单向因果关系。采用综合敏感性分析来验证结果的稳健性,异质性,以及水平多效性的存在。为了提高我们结果的准确性,我们同时对它们进行贝叶斯分析。
    进行MR分析后,我们确定了10种对抗胶质母细胞瘤的免疫表型,FSC-A对自然杀伤T细胞的保护作用最强(OR=0.688,CI=0.515-0.918,P=0.011)。此外,我们发现了11种促进GBM发病率的免疫细胞亚型,包括CD62L-HLADR+单核细胞百分比(OR=1.522,CI=1.004-2.307,P=0.048),CD4+CD8+T细胞白细胞百分比(OR=1.387,CI=1.031-1.866,P=0.031)。在实施反向MR分析之后,其中胶质母细胞瘤作为暴露变量,结果包括21种靶免疫细胞亚型,我们发现只有三种细胞亚型(CD45在CD33+HLADR+CD14dim,CD33+HLADR+绝对计数,和IgD+CD24+B细胞绝对计数)与胶质母细胞瘤表现出单向因果关联。
    我们的研究从基因上证明了免疫细胞和GBM之间的密切关系,指导未来的临床研究。
    UNASSIGNED: Glioblastoma (GBM) is a highly malignant brain tumor, and immune cells play a crucial role in its initiation and progression. The immune system\'s cellular components, including various types of lymphocytes, macrophages, and dendritic cells, among others, engage in intricate interactions with GBM. However, the precise nature of these interactions remains to be conclusively determined.
    UNASSIGNED: In this study, a comprehensive two-sample Mendelian Randomization (MR) analysis was conducted to elucidate the causal relationship between immune cell features and the incidence of GBM. Utilizing publicly available genetic data, we investigated the causal associations between 731 immune cell signatures and the risk of GBM. Subsequently, we conducted a reverse Mendelian randomization analysis to rule out reverse causation. Finally, it was concluded that there is a unidirectional causal relationship between three subtypes of immune cells and GBM. Comprehensive sensitivity analyses were employed to validate the results robustness, heterogeneity, and presence of horizontal pleiotropy. To enhance the accuracy of our results, we concurrently subjected them to Bayesian analysis.
    UNASSIGNED: After conducting MR analyses, we identified 10 immune phenotypes that counteract glioblastoma, with the most protective being FSC-A on Natural Killer T cells (OR = 0.688, CI = 0.515-0.918, P = 0.011). Additionally, we found 11 immune cell subtypes that promote GBM incidence, including CD62L- HLA DR++ monocyte % monocyte (OR = 1.522, CI = 1.004-2.307, P = 0.048), CD4+CD8+ T cell % leukocyte (OR = 1.387, CI = 1.031-1.866, P = 0.031). Following the implementation of reverse MR analysis, where glioblastoma served as the exposure variable and the outcomes included 21 target immune cell subtypes, we discerned that only three cell subtypes (CD45 on CD33+ HLA DR+ CD14dim, CD33+ HLA DR+ Absolute Count, and IgD+ CD24+ B cell Absolute Count) exhibited a unidirectional causal association with glioblastoma.
    UNASSIGNED: Our study has genetically demonstrated the close relationship between immune cells and GBM, guiding future clinical research.
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  • 文章类型: Journal Article
    背景:炎症被认为在糖尿病的发展中起重要作用,并且是2型糖尿病(T2DM)的共同特征。然而,与糖尿病视网膜病变(DR)的关系仍是一个争论的话题.
    方法:本研究采用双样本双向孟德尔随机化(MR)分析来建立免疫细胞特征与DR之间的因果关系。利用公开的GWAS基因数据,我们调查了731个免疫细胞特征与DR风险之间的因果关系.共有四种类型的免疫特征,包括相对单元(RC),绝对细胞(AC),中值荧光强度(MFI),和形态参数(MP),包括在内。进行了敏感性分析来评估稳健性,异质性,以及结果的潜在水平多效性。
    结果:在四个免疫性状中,35种免疫细胞表型与发生DR的风险相关(MFI,RC,AC,和MP),和DR导致26个免疫细胞的表达改变。
    结论:我们使用遗传方法证明了免疫细胞性状与DR之间的强相关性。这一发现为早期DR预防以及未来的临床研究和治疗提供了有价值的见解。
    BACKGROUND: Inflammation is believed to play a central role in the development of diabetes mellitus and is a common feature of type 2 diabetes mellitus (T2DM). However, the association with diabetic retinopathy (DR) remains a topic of debate.
    METHODS: This study employed two-sample bidirectional Mendelian randomization (MR) analyses to establish causal associations between immune cell characteristics and DR. Using publicly available GWAS genetic data, we investigated the causal relationship between 731 immune cell characteristics and the risk of DR. A total of four types of immune features, including relative cell (RC), absolute cell (AC), median fluorescence intensities (MFI), and morphological parameters (MP), were included. Sensitivity analysis was conducted to assess the robustness, heterogeneity, and potential horizontal pleiotropy of the results.
    RESULTS: Thirty-five immune cell phenotypes were correlated with the risk of developing DR among four immune traits (MFI, RC, AC, and MP), and DR resulted in altered expression of twenty-six immune cells.
    CONCLUSIONS: We have demonstrated a strong correlation between immune cell traits and DR using a genetic approach. This finding offers valuable insights for early DR prevention and future clinical research and treatment.
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  • 文章类型: Journal Article
    证据支持免疫细胞与脑出血(ICH)之间的紧密联系。尽管如此,免疫细胞和ICH之间的特定因果关系仍不确定.这里,我们的主要研究使用GSE24265数据集比较了ICH组和假手术组的免疫细胞浸润.之后,我们通过双样本孟德尔随机化(MR)分析广泛检查了免疫细胞与ICH之间的关系,以鉴定可能与ICH的起始和进展相关的特定免疫细胞.然而,调节免疫细胞和ICH之间的因果关系的具体过程仍然未知.在这项研究中,我们的目的是研究免疫细胞特征与血浆代谢物之间的联系,以及等离子体成分和ICH之间的联系。我们的调查发现,亚牛磺酸的水平在ICH的发展中起着关键作用,影响淋巴细胞中转换记忆B细胞的比例。因此,我们的发现为免疫细胞介导的ICH潜在的生物学机制提供了新的见解.
    The evidence supports a strong link between immune cells and intracerebral hemorrhage (ICH). Nonetheless, the specific cause-and-effect associations between immune cells and ICH remain indeterminate. Here, our primary investigation compared immune cell infiltration in the ICH and sham groups using the GSE24265 dataset. Afterward, we extensively examined the relationship between immune cells and ICH by applying a two-sample Mendelian randomization (MR) analysis to identify the particular immune cells that may be associated with the initiation and advancement of ICH. Nevertheless, the specific processes that regulate the cause-and-effect connection between immune cells and ICH remain unknown. In this study, our objective was to investigate the connections between immune cell characteristics and plasma metabolites, as well as the links between plasma components and ICH. Our investigation uncovered that the levels of hypotaurine play a key role in the advancement of ICH, influencing the ratio of switched memory B cells among lymphocytes. Thus, our findings provide novel insights into the potential biological mechanisms underlying immune cell-mediated ICH.
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