MPDZ

MPDZ
  • 文章类型: Journal Article
    MPDZ,具有介导细胞-细胞连接相互作用的多种功能的基因,受体信号,结合多价支架蛋白,与具有双等位基因扰动的临床异质性表型谱相关。尽管它具有临床相关性,这些变体的机械基础仍然难以捉摸,强调需要进行广泛的病例系列和功能调查。在这项研究中,我们按照PRISMA指南,通过两个电子数据库对文献中的病例进行了系统回顾.我们选择了九项研究,包括18个病人,在MPDZ中具有纯合或复合杂合变体,并增加了来自四个不相关家庭的5名患者具有新的MPDZ变体。为了评估Mpdz在听力中的作用,我们分析了由国际小鼠表型分析联盟产生的敲除小鼠模型(Mpdzem1(IMPC)J/em1(IMPC)J)的听觉电生理数据.使用外显子组和基因组测序,我们确定了三个具有复合杂合变体的家族,和一个具有纯合移码变体的家族。MPDZ相关疾病在临床上是异质性的,伴有脑积水,视力障碍,听力障碍和心血管疾病发生最频繁。此外,我们描述了两个不相关的痉挛患者,扩展表型谱。我们对Mpdzem1(IMPC)J/em1(IMPC)J等位基因的鼠分析显示严重的听力障碍。总的来说,我们扩大了对MPDZ相关表型的理解,并突出了异质性表型中的听力损伤和痉挛.
    MPDZ, a gene with diverse functions mediating cell-cell junction interactions, receptor signaling, and binding multivalent scaffold proteins, is associated with a spectrum of clinically heterogeneous phenotypes with biallelic perturbation. Despite its clinical relevance, the mechanistic underpinnings of these variants remain elusive, underscoring the need for extensive case series and functional investigations. In this study, we conducted a systematic review of cases in the literature through two electronic databases following the PRISMA guidelines. We selected nine studies, including 18 patients, with homozygous or compound heterozygous variants in MPDZ and added five patients from four unrelated families with novel MPDZ variants. To evaluate the role of Mpdz on hearing, we analyzed available auditory electrophysiology data from a knockout murine model (Mpdzem1(IMPC)J/em1(IMPC)J) generated by the International Mouse Phenotyping Consortium. Using exome and genome sequencing, we identified three families with compound heterozygous variants, and one family with a homozygous frameshift variant. MPDZ-related disease is clinically heterogenous with hydrocephaly, vision impairment, hearing impairment and cardiovascular disease occurring most frequently. Additionally, we describe two unrelated patients with spasticity, expanding the phenotypic spectrum. Our murine analysis of the Mpdzem1(IMPC)J/em1(IMPC)J allele showed severe hearing impairment. Overall, we expand understanding of MPDZ-related phenotypes and highlight hearing impairment and spasticity among the heterogeneous phenotypes.
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  • 文章类型: Journal Article
    背景:多PDZ结构域面包屑细胞极性复合物成分(MPDZ)与一些人类癌症有关。然而,MPDZ在结直肠癌(CRC)进展中的作用和潜在机制尚不清楚.
    方法:在TCGA和GEO队列中,通过Kaplan-Meier方法和单因素回归分析确定MPDZ在CRC中的预后作用.GSEA代表KEGG,进行Hallmark和GO以表征MPDZ涉及的关键途径。通过计算TCGA和GEO数据评估免疫浸润和免疫治疗结果。CCK8,EDU,transwell和伤口愈合试验用于评估MPDZ对CRC细胞有害性能的影响。将CD8+T细胞和CRC细胞共培养以探讨MPDZ对肿瘤微环境的影响。qRT-PCR,westernblot,免疫沉淀(IP)和甲基化RNA免疫沉淀(me-RIP)用于寻找MPDZ在CRC中的潜在机制。
    结果:MPDZ表达升高的CRC患者的预后明显较差。同时,MPDZ可能是CRC的独立预后风险指标。GSEA分析显示,MPDZ参与了与CRC转移和细胞周期相关的通路。此外,MPDZ的表达与几种免疫抑制剂有关,并具有预测免疫治疗反应的能力。最后,体外实验表明,MPDZ敲低抑制迁移,CRC细胞的侵袭和免疫逃避。机械上,MPDZ敲低通过增加LATS1表达来增强YAP1磷酸化,从而抑制上皮间质转化(EMT)和CRC细胞的免疫逃避。此外,m6A-MPDZmRNA可被m6A识别蛋白YTHDF2识别和降解。
    结论:MPDZ对于CRC的发展至关重要,并且可能是CRC患者免疫治疗联合治疗的有希望的候选者。
    Multiple PDZ Domain Crumbs Cell Polarity Complex Component (MPDZ) is involved in a few human cancers. However, the features and potential mechanisms of MPDZ in progression of colorectal cancer (CRC) remains unknown.
    The prognostic role of MPDZ in CRC was determined by Kaplan-Meier and univariate regression analysis. Enrichment analysis was performed to characterize crucial pathways of MPDZ. Immune infiltration and immunotherapeutic outcome were further evaluated. CCK8, EDU, transwell, and wound healing assay were used to assess the influence of MPDZ on pernicious performance of CRC cells. CD8+ T cells and CRC cells were co-cultured to explore the effect of MPDZ on the tumor microenvironment. qRT-PCR, western blot, immunoprecipitation (IP), and methylated RNA immunoprecipitation (me-RIP) were implemented in seeking for the potential mechanisms of MPDZ in CRC.
    CRC patients with elevated MPDZ expression suffered from significantly worse prognosis. Enrichment analysis revealed that MPDZ involved in pathways related to metastasis and cell cycle in CRC. In addition, MPDZ expression were related to several immunoinhibitors and had the ability to predict immunotherapy response. Finally, in vitro assays demonstrated that MPDZ knockdown inhibited migration, invasion and immune evasion of CRC cells. Mechanistically, MPDZ knockdown enhanced YAP1 phosphorylation by increased LATS1 expression. Moreover, m6A-MPDZ mRNA may be recognized and degraded by m6A recognition protein YTHDF2.
    MPDZ was critical for CRC development and could be a promising candidate for the treatment of CRC patients.
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  • 文章类型: Journal Article
    先天性脑积水是脑室系统中脑脊液积聚引起的常见病。目前已知四个主要基因与脑积水有因果关系,无论是孤立的还是作为共同的临床特征:L1CAM,AP1S2、MPDZ和CCDC88C。这里,我们报告了3例来自2个家庭的先天性脑积水,这是由于CRB2的双等位基因变异,CRB2是一种先前报道的导致肾病综合征的基因,与脑积水相关。2例出现肾囊肿,1例出现孤立性脑积水。神经组织病理学分析使我们能够证明,与以前的提议相反,CRB2变异继发的脑积水的病理机制不是由于狭窄,而是由于Sylvius渡槽和中央延髓管的闭锁。虽然CRB2在很大程度上被证明对根尖极性至关重要,在我们的胎儿病例中进行的免疫标记实验显示,PAR复合物成分(PKCl和PKCζ)以及紧密(ZO-1)和粘附(β-catenin和N-Cadherin)连接分子的正常定位和水平正常,表明先验正常的鞘管极性和心室上皮的细胞-细胞粘附提示了另一种病理机制。有趣的是,在MPDZ和CCDC88C编码蛋白先前与Crumbs(CRB)极性复合物功能性连接的变化的情况下,也描述了Sylvius渡槽的闭锁而非狭窄,这三个人最近都参与了根尖收缩,对中央延髓管形成至关重要的过程。总的来说,我们的研究结果证明了CRB2,MPDZ和CCDC88C变异的共同机制,这可能导致神经管心室细胞的异常心尖收缩,这将形成覆盖延髓中央管的室管膜细胞。因此,我们的研究强调了与CRB2,MPDZ和CCDC88C相关的脑积水构成了先天性非交通性脑积水的单独致病组,Sylvius输水管和延髓中央管闭锁。
    Congenital hydrocephalus is a common condition caused by the accumulation of cerebrospinal fluid in the ventricular system. Four major genes are currently known to be causally involved in hydrocephalus, either isolated or as a common clinical feature: L1CAM, AP1S2, MPDZ and CCDC88C. Here, we report 3 cases from 2 families with congenital hydrocephalus due to bi-allelic variations in CRB2, a gene previously reported to cause nephrotic syndrome, variably associated with hydrocephalus. While 2 cases presented with renal cysts, one case presented with isolated hydrocephalus. Neurohistopathological analysis allowed us to demonstrate that, contrary to what was previously proposed, the pathological mechanisms underlying hydrocephalus secondary to CRB2 variations are not due to stenosis but to atresia of both Sylvius Aqueduct and central medullar canal. While CRB2 has been largely shown crucial for apico-basal polarity, immunolabelling experiments in our fetal cases showed normal localization and level of PAR complex components (PKCι and PKCζ) as well as of tight (ZO-1) and adherens (β-catenin and N-Cadherin) junction molecules indicating a priori normal apicobasal polarity and cell-cell adhesion of the ventricular epithelium suggesting another pathological mechanism. Interestingly, atresia but not stenosis of Sylvius aqueduct was also described in cases with variations in MPDZ and CCDC88C encoding proteins previously linked functionally to the Crumbs (CRB) polarity complex, and all 3 being more recently involved in apical constriction, a process crucial for the formation of the central medullar canal. Overall, our findings argue for a common mechanism of CRB2, MPDZ and CCDC88C variations that might lead to abnormal apical constriction of the ventricular cells of the neural tube that will form the ependymal cells lining the definitive central canal of the medulla. Our study thus highlights that hydrocephalus related to CRB2, MPDZ and CCDC88C constitutes a separate pathogenic group of congenital non-communicating hydrocephalus with atresia of both Sylvius aqueduct and central canal of the medulla.
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  • 文章类型: Review
    UNASSIGNED:在两个具有复合杂合MPDZ变体的兄弟姐妹中呈现视网膜和全身性发现,这些变体被发现具有不同的脉络膜视网膜表现。材料和方法:两名兄弟姐妹患者接受了全面的眼科检查,包括检眼镜,眼底摄影,光学相干断层扫描(OCT),和全外显子组测序的基因检测。
    未经证实:一名4岁男性出现间歇性外斜视,双眼视力下降。眼科检查在两只眼睛中可见黄斑瘤和颞叶脉络膜视网膜萎缩。双眼黄斑的OCT显示出严重的视网膜和脉络膜变薄的破火山口。中央黄斑的荧光素血管造影显示荧光不足,并伴有深脉络膜血管的持久性。眼部基因小组是不可诊断的,但随后的全外显子组测序发现复合杂合,可能的致病性MPDZ变体(父亲的c.3100C>Tp.(Arg1034*)和母亲的c.7472T>Gp.(?))。他的哥哥,一个9岁的男性,有大头畸形病史,但没有进行进一步的检查。在考试中,他的右眼视力为20/25,左眼为20/40,发现双眼的中央凹反射有细微变化。OCT显示两侧中央凹的外部核层(ONL)变薄。Sanger测序显示他对相同的两个MPDZ变体呈阳性。
    UNASSIGNED:MPDZ变异体在先天性脑积水患者中有不同的眼科表现。我们提供了一个病例系列,描述了通过多模态成像在单个家族中与MPDZ变异相关的视网膜表型。
    UNASSIGNED: To present the retinal and systemic findings in two siblings with compound heterozygous MPDZ variants that were found to have different chorioretinal manifestations. Materials and Methods: Two sibling patients underwent comprehensive ophthalmic examination, including ophthalmoscopy, fundus photography, optical coherence tomography (OCT), and genetic testing by whole exome sequencing.
    UNASSIGNED: A 4-year-old male presented with intermittent exotropia and decreased vision in both eyes. Ophthalmologic examination was notable for macular colobomas and far temporal chorioretinal atrophy in both eyes. OCT of the macula in both eyes demonstrated a caldera with severe retinal and choroidal thinning. Fluorescein angiography of the central macula showed hypofluorescence with persistence of deep choroidal vessels. An ocular gene panel was nondiagnostic, but subsequent whole-exome sequencing noted compound heterozygous, likely pathogenic MPDZ variants (c.3100C>T p.(Arg1034*) from father and c.747 + 2T>G p.(?) from mother). His older brother, a 9-year-old male, had a history of macrocephaly but had not undergone further workup. On exam, he had a visual acuity of 20/25 in the right eye and 20/40 in the left eye and was found to have subtle changes in the foveal reflex of both eyes. OCT revealed thinning of the outer nuclear layer (ONL) temporal to the fovea bilaterally. Sanger sequencing revealed he was positive for the same two MPDZ variants.
    UNASSIGNED: MPDZ variants have been described in cases of congenital hydrocephalus with varying ophthalmologic manifestations. We present a case series describing retinal phenotypes associated with MPDZ variants in a single family through multimodal imaging.
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  • 文章类型: Journal Article
    黄斑缺损(MC)是一种罕见的先天性视网膜脉络膜缺损,其特征是黄斑区不同大小的病变。先天性MC的病理机制尚不清楚。新型复合杂合变异,c.4301delA(p。Asp1434fs*3)和c.5255C>G(第Ser1752Ter),在多个PDZ结构域(MPDZ)中,通过对中国家庭中分离的双侧黄斑缺损的先证者进行全外显子组分析,鉴定了MPDZ蛋白。分离分析显示,未受影响的亲本中的每个都是两种变体之一的杂合。计算机模拟和生物信息学分析的结果与实验数据一致。MPDZ在斑马鱼中的击倒引起椭球区的减少,外部限制膜的破坏,以及随后的RPE退化。总的来说,斑马鱼中MPDZ的缺失导致视网膜发育失败。这些结果表明,MPDZ在黄斑的发生和维持中起着至关重要的作用,新的复合杂合变异是该中国家庭常染色体隐性黄斑缺陷的原因。
    Macular coloboma (MC) is a rare congenital retinochoroidal defect characterized by lesions of different sizes in the macular region. The pathological mechanism underlying congenital MC is unknown. Novel compound heterozygous variations, c.4301delA (p.Asp1434fs*3) and c.5255C>G (p.Ser1752Ter), in the multiple PDZ domain (MPDZ) proteins were identified via whole-exome analysis on the proband with isolated bilateral macular coloboma in a Chinese family. Segregation analysis revealed that each of the unaffected parents was heterozygous for one of the two variants. The results of the in silico and bioinformatics analysis were aligned with the experimental data. The knockdown of MPDZ in zebrafish caused a decrease in the ellipsoid zone, a destruction of the outer limiting membrane, and the subsequent RPE degeneration. Overall, the loss of MPDZ in zebrafish contributed to retinal development failure. These results indicate that MPDZ plays an essential role in the occurrence and maintenance of the macula, and the novel compound heterozygous variations were responsible for an autosomal recessive macular deficiency in this Chinese family.
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  • 文章类型: Journal Article
    我们旨在确定胶质母细胞瘤不可避免复发的基因组驱动因素。
    通过CGH阵列筛选10对初始和复发的冷冻IDHwt胶质母细胞瘤样品。然后对19对的富集组群进行下一代测序(NGS)。使用TCGA数据集分析MPDZ改变。
    纳入了19例IDHwt胶质母细胞瘤患者。中位年龄为54.5y/o(37.2-72.8)。使用CGH数组,无监督分析通过配对的初始和复发肿瘤汇总队列。只有44%的CGH阵列改变在复发时是保守的(扩增:55%;缺失:30%)。复发时丢失了两个区域(包括FPR1,2和3):19q13.33和19q13.41。MPDZ和其他25个基因在≥20%的复发性肿瘤中发生了改变。对29个候选基因的NGS分析揭示了4个具有致病性突变的基因:(FPR2,REL,TYRP1和MPDZ)。MPDZ(多PDZ结构域面包屑细胞极性复合物成分)因复发时发生的两种致病性突变而改变。使用TCGA数据集,我们观察到较低的MPDZmRNA表达与IDHwt(p<0.001)和IV级(p<0.001)神经胶质瘤相关。最后,在IDHwt和IDH突变的神经胶质瘤中,MPDZmRNA的低表达与低总生存率显著相关。加强MPDZ损失的潜在替代影响。
    我们的结果表明,在IDHwt胶质母细胞瘤患者放化疗后复发时,MPDZ更频繁地改变,这表明MPDZ损伤可能有助于这些肿瘤的系统耐药性,从而开辟了新的治疗前景。
    We aimed to identify genomic drivers of glioblastoma inevitable recurrence.
    Ten pairs of initial and recurrent frozen IDHwt glioblastoma samples were screened by CGH Array. Next Generation Sequencing (NGS) was then performed on an enriched cohort of 19 pairs. MPDZ alterations were analyzed using TCGA dataset.
    Nineteen IDHwt glioblastoma patients were included. Median age was 54.5 y/o (37.2-72.8). Using CGH array, unsupervised analysis aggregated the cohort by paired initial and recurrent tumors. Only 44% of CGH Array alterations were conserved at recurrence (amplifications: 55%; deletions: 30%). Two regions (including FPR1, 2 and 3) were lost at relapse: 19q13.33 and 19q13.41. MPDZ and 25 other genes were altered in ≥20% of recurrent tumors. NGS analysis of 29 candidate genes revealed 4 genes with pathogenic mutations: (FPR2, REL, TYRP1 and MPDZ). MPDZ (Multiple PDZ Domain Crumbs Cell Polarity Complex Component) was altered by two pathogenic mutations occurring at relapse. Using TCGA dataset we observed that a lower MPDZ mRNA expression was associated with IDHwt (p < 0.001) and grade IV (p < 0.001) gliomas. Finally, a low mRNA MPDZ expression was significantly correlated to poor overall survival in both IDHwt and IDH mutated gliomas, reinforcing the potential pejorative impact of MPDZ loss.
    Our results suggest that MPDZ is more frequently altered at relapse after radio-chemotherapy in glioblastoma IDHwt patients, suggesting that MPDZ impairment could contribute to the systematic resistance of these tumors opening new therapeutic perspectives.
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  • 文章类型: Journal Article
    Hearing loss (HL) is the most common neurosensory defect in humans that affects the normal communication. Disease is clinically and genetically heterogeneous, rendering challenges for the molecular diagnosis of affected subjects. This study highlights the phenotypic and genetic complexity of inherited HL in a large consanguineous Pakistan kindred. Audiological evaluation of all affected individuals revealed varying degree of mild to profound sensorineural HL. Whole exome (WES) of four family members followed by Sanger sequencing revealed candidate disease-associated variants in five known deafness genes: GJB2 (c.231G>A; p.(Trp77 *)), SLC26A4 (c.1337A>G; p.(Gln446Arg)), CDH23 (c.2789C>T; p.(Pro930Leu)), KCNQ4 (c.1672G>A; p.(Val558Met)) and MPDZ (c.4124T>C; p.(Val1375Ala)). All identified variants replaced evolutionary conserved residues, were either absent or had low frequencies in the control databases. Our in silico and 3-Dimensional (3D) protein topology analyses support the damaging impact of identified variants on the encoded proteins. However, except for the previously established \"pathogenic\" and \"likely pathogenic\" categories for the c.231G>A (p.(Trp77 *)) allele of GJB2 and c.1377A>G (p.(Gln446Arg)) of SLC26A4, respectively, all the remaining identified variants were classified as \"uncertain significance\" based on the American College of Medical Genetics and Genomics/Association for Molecular Pathology (ACMG/AMP) variant pathogenicity guidelines. Our study highlights the complexity of genetic traits in consanguineous families, and the need of combining the functional studies even with the comprehensive profiling of multiple family members to improve the genetic diagnosis in complex inbred families.
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  • 文章类型: Journal Article
    BACKGROUND: Keratoconus is a chronic degenerative disorder of the cornea characterized by thinning and cone-shaped protrusions. Although genetic factors play a key role in keratoconus development, the etiology is still under investigation. The occurrence of single-nucleotide polymorphisms (SNPs) associated with keratoconus in Russian patients is poorly studied. The purpose of this study was to validate whether three reported keratoconus-associated SNPs (rs1536482 near the COL5A1 gene, rs2721051 near the FOXO1 gene, rs1324183 near the MPDZ gene) are also actual for a Russian cohort of patients. Additionally, we investigated the COL5A1 promoter sequence for single-nucleotide variants (SNVs) in a subgroup of keratoconus patients with at least one rs1536482 minor allele (rs1536482+) to assess the role of these SNVs in keratoconus susceptibility associated with rs1536482.
    METHODS: This case-control study included 150 keratoconus patients and two control groups (main and additional, 205 and 474 participants, respectively). We performed PCR targeting regions flanking SNVs and the COL5A1 promoter, followed by Sanger sequencing of amplicons. The additional control group was genotyped using an SNP array.
    RESULTS: The minor allele frequency was significantly different between the keratoconus and control cohorts (main and combined) for rs1536482, rs2721051, and rs1324183 (p-value < 0.05). The rare variants rs1043208782 and rs569248712 were found in the COL5A1 promoter in two out of 94 rs1536482+ keratoconus patients.
    CONCLUSIONS: rs1536482, rs2721051, and rs1324183 were associated with keratoconus in a Russian cohort. SNVs in the COL5A1 promoter do not play a major role in keratoconus susceptibility associated with rs1536482.
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  • 文章类型: Journal Article
    Angiogenesis is coordinated by VEGF and Notch signaling. DLL4-induced Notch signaling inhibits tip cell formation and vessel branching. To ensure proper Notch signaling, receptors and ligands are clustered at adherens junctions. However, little is known about factors that control Notch activity by influencing the cellular localization of Notch ligands. Here, we show that the multiple PDZ domain protein (MPDZ) enhances Notch signaling activity. MPDZ physically interacts with the intracellular carboxyterminus of DLL1 and DLL4 and enables their interaction with the adherens junction protein Nectin-2. Inactivation of the MPDZ gene leads to impaired Notch signaling activity and increased blood vessel sprouting in cellular models and the embryonic mouse hindbrain. Tumor angiogenesis was enhanced upon endothelial-specific inactivation of MPDZ leading to an excessively branched and poorly functional vessel network resulting in tumor hypoxia. As such, we identified MPDZ as a novel modulator of Notch signaling by controlling ligand recruitment to adherens junctions.
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  • 文章类型: Journal Article
    During mouse preimplantation development, blastomeres are equipotent until polarity establishment at compacted 8-cell stage. The intrinsic nature of polarity is the asymmetric distribution of polarity proteins between inside and outside blastomeres along the direction of apical-basal axis. This study investigated the early developmental temporal and spatial expression of the main CRUMBS polarity complex proteins in the mouse preimplantation embryo. We observed that Crb3, Pals1, Patj and Mpdz are transcribed in the mouse preimplantation embryo. However, the asymmetric distribution of these polarity proteins is not established until the compacted 8-cell stage. From compaction and thereafter, CRB3 and PALS1 are progressively enriched in the apical membrane, while PATJ and MPDZ are discretely localized at both tight junctions and the apical membrane adjacent to tight junctions. These temporal and spatial distribution patterns suggest that CRUMBS polarity complex might be involved in the cell polarity establishment in the early mouse embryo and reinforce the viewpoint that developmentally spatial asymmetries are first set up at the compaction stage. The present study provides a foundation for further investigation on the functions of CRUMBS polarity complex in trophectoderm specification and blastocyst morphogenesis.
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