Hospital-acquired infection

医院获得性感染
  • 文章类型: Journal Article
    麻醉人员的手卫生对于预防手术室医院感染很重要;然而,一个有效的监测系统仍然难以捉摸。在这项研究中,我们利用基于手术室视频的深度学习方法来检测麻醉提供者的酒精手部卫生行为.从11月开始的四个月内收集了视频,2018年2月,2019年,在单人手术室。模拟并添加其他数据。所提出的算法利用了二维(2D)和三维(3D)卷积神经网络(CNN),顺序。首先,使用预训练的2DCNN,每个图像帧检测到出现在目标OR视频中的多人麻醉人员.在此之后,将多人的每个图像帧检测链接并传输到3DCNN,以对手部卫生动作进行分类.计算光流并将其用作附加的输入模态。准确性,评估了手卫生检测的敏感性和特异性。手卫生行为的二元分类评估显示,准确性为0.88,灵敏度为0.78,特异性为0.93,操作曲线下面积(AUC)为0.91。开发了一种基于3DCNN的算法来检测手部卫生动作。深度学习方法有可能应用于实际临床场景,以具有成本效益的方式提供连续监测。
    Hand hygiene among anesthesia personnel is important to prevent hospital-acquired infections in operating rooms; however, an efficient monitoring system remains elusive. In this study, we leverage a deep learning approach based on operating room videos to detect alcohol-based hand hygiene actions of anesthesia providers. Videos were collected over a period of four months from November, 2018 to February, 2019, at a single operating room. Additional data was simulated and added to it. The proposed algorithm utilized a two-dimensional (2D) and three-dimensional (3D) convolutional neural networks (CNNs), sequentially. First, multi-person of the anesthesia personnel appearing in the target OR video were detected per image frame using the pre-trained 2D CNNs. Following this, each image frame detection of multi-person was linked and transmitted to a 3D CNNs to classify hand hygiene action. Optical flow was calculated and utilized as an additional input modality. Accuracy, sensitivity and specificity were evaluated hand hygiene detection. Evaluations of the binary classification of hand-hygiene actions revealed an accuracy of 0.88, a sensitivity of 0.78, a specificity of 0.93, and an area under the operating curve (AUC) of 0.91. A 3D CNN-based algorithm was developed for the detection of hand hygiene action. The deep learning approach has the potential to be applied in practical clinical scenarios providing continuous surveillance in a cost-effective way.
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  • 文章类型: Journal Article
    背景:接触板方法被广泛接受,并用于卫生和污染水平至关重要的各个领域。有关接触板方法在实际医疗环境中采样织物微生物污染水平的适用性的证据有限。这项研究旨在评估接触板方法在实际医疗保健环境中检测医用织物上微生物污染的适用性,从而为织物微生物取样方法提供了基准。
    方法:在某医院三级产科病房,这项研究选择了24个靠近病床的隐私窗帘。1日,采用接触板和拭子法从隐私窗帘中收集微生物样本,Seven,14日,在他们被绞死后的第28天。计算了每个隐私窗帘表面上的总菌落数,并进行微生物鉴定。
    结果:排除时间的影响后,房间类型,以及检测到的微生物负荷上的窗帘位置,线性混合效应模型分析显示,与拭子法相比,接触板法的菌落计数较低(P<0.001).然而,接触平板法比拭子法分离出更多的微生物种类(P<0.001)。采用接触平板法分离出病原菌291株,采用拭子法分离出病原菌133株。两种采样方法对革兰氏阴性菌的检测无差异(P=0.089)。此外,双人房间窗帘的微生物负荷低于双人房间(P=0.021),窗户附近窗帘的微生物负荷低于门附近(P=0.004)。
    结论:接触板法在应变分离方面优于拭子法。拭子法更适合评价织物的细菌污染。
    BACKGROUND: The contact plate method is widely accepted and used in various fields where hygiene and contamination levels are crucial. Evidence regarding the applicability of the contact plate method for sampling fabric microbial contamination levels in real medical environments was limited. This study aimed to assess the applicability of the contact plate method for detecting microbial contamination on medical fabrics in a real healthcare environment, thereby providing a benchmark for fabric microbial sampling methods.
    METHODS: In a level three obstetrics ward of a hospital, twenty-four privacy curtains adjacent to patient beds were selected for this study. The contact plate and swab method were used to collect microbial samples from the privacy curtains on the 1st, 7th, 14th, and 28th days after they were hung. The total colony count on each privacy curtain surface was calculated, and microbial identification was performed.
    RESULTS: After excluding the effects of time, room type, and curtain location on the detected microbial load, the linear mixed-effects model analysis showed that contact plate method yielded lower colony counts compared to swab method (P < 0.001). However, the contact plate method isolated more microbial species than swab method (P < 0.001). 291 pathogenic strains were isolated using the contact plate method and 133 pathogenic strains were isolated via the swab method. There was no difference between the two sampling methods in the detection of gram-negative bacteria (P = 0.089). Furthermore, the microbial load on curtains in double-occupancy rooms was lower than those in triple-occupancy rooms (P = 0.021), and the microbial load on curtains near windows was lower than that near doors (P = 0.004).
    CONCLUSIONS: Contact plate method is superior to swab method in strain isolation. Swab method is more suitable for evaluating the bacterial contamination of fabrics.
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  • 文章类型: Journal Article
    目的:本研究旨在调查抗菌药物耐药模式和医院获得性感染(HAIs)的流行情况。该研究的重点是负责HAIs的常见微生物,并探讨了抗微生物药物抗性分离株带来的新挑战。
    方法:对123例HAIs患者进行综合分析,在伊玛目霍梅尼医院的外科和重症监护室(ICU)住院,伊兰,伊朗,进行了六个月的时间。病原菌分离株,包括耐甲氧西林金黄色葡萄球菌(MRSA)和耐万古霉素金黄色葡萄球菌(VRSA),被分离并接受抗生素药敏试验。
    结果:研究结果表明,多重耐药(MDR)分离株的患病率很高,其中73.3%为MRSA。值得注意的是,6.7%的金黄色葡萄球菌分离株对万古霉素表现出耐药性,表明VRSA的出现。呼吸道感染被确定为最普遍的HAI,占病例的34.67%,通常由延长ICU住院时间和侵入性外科手术引起。此外,60岁及以上的病人,特别是那些与MDR相关的,对HAI表现出更高的脆弱性。
    结论:这项研究揭示了耐药性与HAI之间复杂的相互作用,强调合理使用抗生素和控制感染在应对这一关键医疗挑战中的重要作用。
    OBJECTIVE: This research study was undertaken to investigate antimicrobial resistance patterns and the prevalence of hospital-acquired infections (HAIs). The study focuses on common microorganisms responsible for HAIs and explores emerging challenges posed by antimicrobial drug-resistant isolates.
    METHODS: A comprehensive analysis of 123 patients with HAIs, hospitalized in surgical department and intensive care unit (ICU) at Imam Khomeini Hospital, Ilam, Iran, was conducted over a six-month period. Pathogenic bacterial isolates, including methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant Staphylococcus aureus (VRSA), were isolated and subjected to antibiotic susceptibility testing.
    RESULTS: The study findings revealed a significant prevalence of multidrug-resistant (MDR) isolates, of which 73.3% were MRSA. Notably, 6.7% of S. aureus isolates exhibited resistance to vancomycin, indicating the emergence of VRSA. Respiratory infections were identified as the most prevalent HAI, constituting 34.67% of cases, often arising from extended ICU stays and invasive surgical procedures. Furthermore, patients aged 60 and above, particularly those associated with MDR, exhibited higher vulnerability to HAI.
    CONCLUSIONS: This research sheds light on the intricate interplay between drug resistance and HAI, highlighting the imperative role of rational antibiotic use and infection control in addressing this critical healthcare challenge.
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  • 文章类型: Journal Article
    重症监护病房(ICU)的死亡率仍然很高,尤其是在发展中国家,无论关键管理的进展如何。缺乏关于医院死亡原因的研究,特别是巴勒斯坦的ICU。这项研究评估了重症患者的人口统计学和临床特征,并确定了ICU患者死亡率的预测因素。
    一项回顾性研究评估了从2017年1月至2019年1月在ICU停留超过24小时的所有患者。数据从患者档案中收集。患者特征(背景,临床变量,和合并症)记录。
    该研究包括227名符合条件的ICU患者。病例平均年龄55.5(SD±18.2)岁。ICU总死亡率为31.7%。以下因素与高调整死亡率几率相关:从医院内入院(调整后优势比(aOR),2.1,95CI:1.1-3.9,p<0.05),入院时肌酐水平≥2mg/dl(aOR,2.7,95CI:1.3-5.8,p<0.01),恶性血液病患者(aOR,3.4,95CI:1.6-6.7,p=0.001),免疫受损(aOR,2.5,95CI:1.3-4.7,p<0.01),感染性休克(aOR,27.1,95CI:7.9-88.3,p<0.001),医院获得性感染(AOR:13.4,95CI:4.1-57.1,p<0.001),多源感染患者(aOR:16.3,95CI:6.4-57.1,p<0.001)。此外,高SOFA和APACHE分数预测道德(p<0.001)。
    ICU患者的死亡率很高。在医院病房收治的人群中,这一数字更高,感染性休克,医院获得性感染,多种感染源,和多药耐药感染。因此,应制定策略以改善ICU环境,并提供足够的资源以最大程度地减少这些预测因素的影响.
    UNASSIGNED: The intensive care unit (ICU) mortality rate remains high, especially in developing countries, regardless of the advances in critical management. There is a lack of studies about mortality causes in hospitals and particularly ICUs in Palestine.This study evaluated the demographic and clinical characteristics of critically ill patients and determined the predictors of mortality among patients in the ICU.
    UNASSIGNED: A retrospective study assessed all patients who stayed in the ICU for more than 24 h from January 2017 to January 2019. Data were collected from the patient\'s files. Patient characteristics (background, clinical variables, and comorbidities) were recorded.
    UNASSIGNED: The study included 227 eligible ICU patients. The cases\' mean age was 55.5 (SD ± 18.2) years. The overall ICU mortality rate was 31.7%. The following factors were associated with high adjusted mortality odds: admission from inside the hospital (adjusted odds ratio (aOR), 2.1, 95% CI: 1.1-3.9, p < 0.05), creatinine level ≥2 mg/dl on admission (aOR, 2.7, 95% CI: 1.3-5.8, p < 0.01), hematology malignancy patients (aOR, 3.4, 95% CI: 1.6-6.7, p = 0.001), immune-compromised (aOR, 2.5, 95% CI: 1.3-4.7, p < 0.01), septic shock (aOR, 27.1, 95% CI: 7.9-88.3, p < 0.001), hospital-acquired infections (aOR: 13.4, 95% CI: 4.1-57.1, p < 0.001), and patients with multiple-source infection (aOR: 16.3, 95% CI: 6.4-57.1, p < 0.001). Also, high SOFA and APACHE scores predicted morality (p < 0.001).
    UNASSIGNED: The mortality rate among ICU patients was high. It was higher among those admitted from the hospital wards, septic shock, hospital-acquired infection, multiple infection sources, and multi-drug resistance infections. Thus, strategies should be developed to enhance the ICU environment and provide sufficient resources to minimize the effects of these predictors.
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  • 文章类型: Journal Article
    本研究旨在探讨替加环素治疗耐碳青霉烯鲍曼不动杆菌呼吸机相关性肺炎(CRAB-VAP)失败的危险因素,并建立预测CRAB-VAP失败发生率及预后的预测模型。
    在2022年1月1日至2022年12月31日期间,共有189名CRAB-VAP患者被纳入了来自两家国家三级甲等医院的安全性分析集。使用单因素分析确定CRAB-VAP治疗失败的危险因素。多变量逻辑分析,和一个独立的列线图来显示结果。
    在189名患者中,106例(56.1%)患者为成功治疗组,83例(43.9%)患者属于治疗失败组.多因素Logistic模型分析显示,年龄(OR=1.04,95%CI:1.02,1.07,p=0.001),是的。低蛋白血症(OR=2.43,95%CI:1.20,4.90,p=0.013),日剂量为200mg(OR=2.31,95%CI:1.07,5.00,p=0.034),是的。手术前14天内的药物治疗(OR=2.98,95%CI:1.19,7.44,p=0.019),和没有。微生物清除率(OR=0.31,95%CI:0.14,0.70,p=0.005)是替加环素治疗失败的危险因素.接收机工作特性(ROC)分析表明,预测模型的AUC面积为0.745(0.675-0.815),决策曲线分析(DCA)表明该模型在临床实践中是有效的。
    年龄,低蛋白血症,日剂量,在手术干预前14天内服药,和微生物清除都是CRAB-VAP治疗失败的重要危险因素,列线图模型表明,高年龄是最重要的因素。因为替加环素治疗CRAB-VAP的失败率高,该预测模型可以帮助医生纠正或避免临床治疗过程中的危险因素。
    UNASSIGNED: This study aimed to explore the risk factors for failed treatment of carbapenem-resistant Acinetobacter baumannii ventilator-associated pneumonia (CRAB-VAP) with tigecycline and to establish a predictive model to predict the incidence of failed treatment and the prognosis of CRAB-VAP.
    UNASSIGNED: A total of 189 CRAB-VAP patients were included in the safety analysis set from two Grade 3 A national-level hospitals between 1 January 2022 and 31 December 2022. The risk factors for failed treatment with CRAB-VAP were identified using univariate analysis, multivariate logistic analysis, and an independent nomogram to show the results.
    UNASSIGNED: Of the 189 patients, 106 (56.1%) patients were in the successful treatment group, and 83 (43.9%) patients were in the failed treatment group. The multivariate logistic model analysis showed that age (OR = 1.04, 95% CI: 1.02, 1.07, p = 0.001), yes. of hypoproteinemia (OR = 2.43, 95% CI: 1.20, 4.90, p = 0.013), the daily dose of 200 mg (OR = 2.31, 95% CI: 1.07, 5.00, p = 0.034), yes. of medication within 14 days prior to surgical intervention (OR = 2.98, 95% CI: 1.19, 7.44, p = 0.019), and no. of microbial clearance (OR = 0.31, 95% CI: 0.14, 0.70, p = 0.005) were risk factors for the failure of tigecycline treatment. Receiver operating characteristic (ROC) analysis showed that the AUC area of the prediction model was 0.745 (0.675-0.815), and the decision curve analysis (DCA) showed that the model was effective in clinical practice.
    UNASSIGNED: Age, hypoproteinemia, daily dose, medication within 14 days prior to surgical intervention, and microbial clearance are all significant risk factors for failed treatment with CRAB-VAP, with the nomogram model indicating that high age was the most important factor. Because the failure rate of CRAB-VAP treatment with tigecycline was high, this prediction model can help doctors correct or avoid risk factors during clinical treatment.
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  • 文章类型: Journal Article
    简介:中心线相关血流感染(CLABSI)是一种医院获得性感染(HAI),与普通患者人群的发病率和死亡率增加有关。然而,很少有研究评估发病率,结果,创伤患者CLABSI的危险因素。这项研究旨在确定创伤患者中()CLABSI的阳性率以及与()CLABSI相关的危险因素。方法:查询2017-2021年创伤质量改善计划数据库中年龄≥18岁的创伤患者行中线安置。我们比较了(+)CLABSI与(-)CLABSI患者。进行了双变量和多变量逻辑回归分析。结果:从175,538例接受中线放置的患者中,469(<0.1%)开发了CLABSI。(+)CLABSI患者肝硬化发生率较高(3.9%vs.2.0%,p=0.003)和慢性肾脏病(CKD)(4.3%vs.2.6%,p=0.02)。(+)CLABSI组的损伤严重程度评分增加(中位数:25vs.13,p<0.001),住院时间(LOS)(中位数33.5vs.8天,p<0.001),重症监护病房LOS(中位数21vs.6天,p<0.001),和死亡率(23.7%vs.19.6%,p=0.03)。(+)CLABSI的独立相关危险因素包括导管相关尿路感染(CAUTI)(比值比[OR]=5.52,置信区间[CI]=3.81-8.01),呼吸机相关性肺炎(VAP)(OR=4.43,CI=3.42-5.75),手术部位感染(SSI)(OR=3.66,CI=2.55-5.25),小肠损伤(OR=1.91,CI=1.29-2.84),CKD(OR=2.08,CI=1.25-3.47),和肝硬化(OR=1.81,CI=1.08-3.02)(均p<0.05)。结论:尽管CLABSI发生在<0.1%的中央线创伤患者中,它显著影响LOS和发病率/死亡率。(+)CLABSI的最强相关风险因素包括HAIs(CAUTI/VAP/SSI),特定损伤(小肠),和合并症。提供者应意识到这些危险因素,并努力预防这些患者的CLABSI。
    Introduction: Central line-associated blood stream infection (CLABSI) is a hospital-acquired infection (HAI) associated with increased morbidity and mortality among the general patient population. However, few studies have evaluated the incidence, outcomes, and risk factors for CLABSI in trauma patients. This study aimed to identify the rate of positive (+)CLABSI in trauma patients and risk factors associated with (+)CLABSI. Methods: The 2017-2021 Trauma Quality Improvement Program database was queried for trauma patients aged ≥18 years undergoing central-line placement. We compared patients with (+)CLABSI vs. (-)CLABSI patients. Bivariate and multivariable logistic regression analyses were performed. Results: From 175,538 patients undergoing central-line placement, 469 (<0.1%) developed CLABSI. The (+)CLABSI patients had higher rates of cirrhosis (3.9% vs. 2.0%, p = 0.003) and chronic kidney disease (CKD) (4.3% vs. 2.6%, p = 0.02). The (+)CLABSI group had increased injury severity score (median: 25 vs. 13, p < 0.001), length of stay (LOS) (median 33.5 vs. 8 days, p < 0.001), intensive care unit LOS (median 21 vs. 6 days, p < 0.001), and mortality (23.7% vs. 19.6%, p = 0.03). Independent associated risk factors for (+)CLABSI included catheter-associated urinary tract infection (CAUTI) (odds ratio [OR] = 5.52, confidence interval [CI] = 3.81-8.01), ventilator-associated pneumonia (VAP) (OR = 4.43, CI = 3.42-5.75), surgical site infection (SSI) (OR = 3.66, CI = 2.55-5.25), small intestine injury (OR = 1.91, CI = 1.29-2.84), CKD (OR = 2.08, CI = 1.25-3.47), and cirrhosis (OR = 1.81, CI = 1.08-3.02) (all p < 0.05). Conclusion: Although CLABSI occurs in <0.1% of trauma patients with central-lines, it significantly impacts LOS and morbidity/mortality. The strongest associated risk factors for (+)CLABSI included HAIs (CAUTI/VAP/SSI), specific injuries (small intestine), and comorbidities. Providers should be aware of these risk factors with efforts made to prevent CLABSI in these patients.
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  • 文章类型: Journal Article
    肺炎是严重创伤性脑损伤(TBI)患者常见的合并症,并与发病率和死亡率增加有关。在这项研究中,我们建立了年轻成年雄性和雌性小鼠气管内肺炎克雷伯菌给药模型,在实验性TBI后4天,研究肺炎克雷伯菌感染如何影响急性TBI后结局。剂量反应曲线确定了肺炎克雷伯菌接种的最佳剂量(1×10^6个菌落形成单位),TBI后4天的给药导致短暂的体重减轻和疾病行为(活动不足和急性呼吸困难)。肺炎克雷伯菌感染导致感染后24小时血清和支气管肺泡灌洗液中的促炎细胞因子增加,在TBI和假(未受伤)小鼠中。7天,当所有组的髓过氧化物酶+中性粒细胞数量恢复到基线时,与TBI+载体小鼠相比,在TBI+肺炎克雷伯氏菌小鼠中观察到肺组织病理学,空域大小增加。在大脑中,在对TBI的反应中急性观察到神经炎症基因表达增加,与单独的TBI或肺炎克雷伯菌相比,TBI+肺炎克雷伯菌小鼠的Ccl2和Hmox1增加加剧。然而,受损大脑中存在神经炎症免疫细胞,以及皮质和海马脑组织的损伤程度,肺炎克雷伯菌和媒介物处理的小鼠在7天之间具有可比性。在一个时间过程中对粪便微生物组的检查未发现损伤或肺炎克雷伯菌对细菌多样性或丰度的任何明显影响。一起,这些研究结果表明,肺炎克雷伯菌肺部感染后可诱导急性和短暂的炎症反应,主要局限在肺部,有一些全身效应。然而,这种感染对TBI后大脑的继发性损伤过程影响最小.需要未来的研究来评估这种双重攻击的潜在长期后果。
    Pneumonia is a common comorbidity in patients with severe traumatic brain injury (TBI), and is associated with increased morbidity and mortality. In this study, we established a model of intratracheal Klebsiella pneumoniae administration in young adult male and female mice, at 4 days following an experimental TBI, to investigate how K. pneumoniae infection influences acute post-TBI outcomes. A dose-response curve determined the optimal dose of K. pneumoniae for inoculation (1 x 10^6 colony forming units), and administration at 4 days post-TBI resulted in transient body weight loss and sickness behaviors (hypoactivity and acute dyspnea). K. pneumoniae infection led to an increase in pro-inflammatory cytokines in serum and bronchoalveolar lavage fluid at 24 h post-infection, in both TBI and sham (uninjured) mice. By 7 days, when myeloperoxidase + neutrophil numbers had returned to baseline in all groups, lung histopathology was observed with an increase in airspace size in TBI + K. pneumoniae mice compared to TBI + vehicle mice. In the brain, increased neuroinflammatory gene expression was observed acutely in response to TBI, with an exacerbated increase in Ccl2 and Hmox1 in TBI + K. pneumoniae mice compared to either TBI or K. pneumoniae alone. However, the presence of neuroinflammatory immune cells in the injured brain, and the extent of damage to cortical and hippocampal brain tissue, was comparable between K. pneumoniae and vehicle-treated mice by 7 days. Examination of the fecal microbiome across a time course did not reveal any pronounced effects of either injury or K. pneumoniae on bacterial diversity or abundance. Together, these findings demonstrate that K. pneumoniae lung infection after TBI induces an acute and transient inflammatory response, primarily localized to the lungs with some systemic effects. However, this infection had minimal impact on secondary injury processes in the brain following TBI. Future studies are needed to evaluate the potential longer-term consequences of this dual-hit insult.
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  • 文章类型: Journal Article
    我们在新的医院中发现了23例与定植的管道系统相关的免疫原性分枝杆菌呼吸道获取。我们进行了基因组和流行病学调查,以评估从医院水源中克隆获得的免疫原分枝杆菌,并增进对免疫原分枝杆菌分离株之间遗传距离的了解。我们对2013年8月至2021年7月在一家学术医院的4个重症监护病房和中间病房从患者和水源获得的28个免疫原分枝杆菌分离株进行了全基因组测序。研究医院分离株是从23例经历了免疫原分枝杆菌从头呼吸分离的患者和从五个自来水出口获得的生物膜中回收的。我们还分析了来自先前测序的临床(n=7)和环境(n=3)外部对照分离株的10μM免疫源基因组。38个分离的队列聚集成三个进化枝,成对的单核苷酸多态性(SNP)距离范围为0至106,697个SNP。我们确定了Clade1中的两个研究医院分离株集群和Clade2中的一个集群,其中临床和环境分离株的差异少于10个SNP,并且辅助基因组变异少于0.5%。40个SNP和5%辅助基因的限制性较低的组合阈值可靠地捕获了符合医院采集临床标准的其他分离株,但在310对流行病学无关的分离株中,有12对(4%)也达到了这一阈值.核心和辅助基因组分析证实了从医院水源到患者的多个免疫原分枝杆菌克隆的呼吸道获取。结合流行病学调查,基因组阈值准确区分医院采集。
    We identified 23 cases of Mycobacterium immunogenum respiratory acquisition linked to a colonized plumbing system at a new hospital addition. We conducted a genomic and epidemiologic investigation to assess for clonal acquisition of M. immunogenum from hospital water sources and improve understanding of genetic distances between M. immunogenum isolates. We performed whole-genome sequencing on 28 M. immunogenum isolates obtained from August 2013 to July 2021 from patients and water sources on four intensive care and intermediate units at an academic hospital. Study hospital isolates were recovered from 23 patients who experienced de novo respiratory isolation of M. immunogenum and from biofilms obtained from five tap water outlets. We also analyzed 10 M. immunogenum genomes from previously sequenced clinical (n = 7) and environmental (n = 3) external control isolates. The 38-isolate cohort clustered into three clades with pairwise single-nucleotide polymorphism (SNP) distances ranging from 0 to 106,697 SNPs. We identified two clusters of study hospital isolates in Clade 1 and one cluster in Clade 2 for which clinical and environmental isolates differed by fewer than 10 SNPs and had less than 0.5% accessory genome variation. A less restrictive combined threshold of 40 SNPs and 5% accessory genes reliably captured additional isolates that met clinical criteria for hospital acquisition, but 12 (4%) of 310 epidemiologically unrelated isolate pairs also met this threshold. Core and accessory genome analyses confirmed respiratory acquisition of multiple clones of M. immunogenum from hospital water sources to patients. When combined with epidemiologic investigation, genomic thresholds accurately distinguished hospital acquisition.
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  • 文章类型: Journal Article
    在2019年冠状病毒病(COVID-19)大流行期间,在接受SARS-CoV-2感染治疗的患者中,在美国,产生新德里金属-B-内酰胺酶(NDM)碳青霉烯酶的肺炎克雷伯菌感染,巴西,墨西哥,和意大利被观察到,特别是在重症监护病房(ICU)。这项研究旨在评估肺炎克雷伯菌NDM感染和其他细菌感染对因COVID-19而在ICU接受治疗的患者死亡率的影响。
    160名符合研究资格的患者因COVID-19在ICU住院。分为三组:仅有COVID-19感染的患者(N=72),COVID-19感染和肺炎克雷伯菌NDM感染的患者(N=30),以及COVID-19感染和肺炎克雷伯菌NDM以外的细菌病原学感染的患者(N=58)。各组的死亡率和选择的人口统计学数据;在第1、3、5和7天分析的生化参数;合并症;和ICU评分进行分析。
    细菌感染,包括肺炎克雷伯菌NDM型,并没有提高死亡率。在COVID-19急性期存活的患者组中,生存时间延长:NDM细菌感染组的中位总生存时间为13天,其他细菌感染组14天,仅在COVID-19组中为7天。比较COVID-19与NDM感染组和仅COVID-19组,调整后的模型估计有统计学意义的风险比为0.28(p=0.002).多变量分析表明,年龄,APACHEII得分,和CRP是所有患者组死亡率的预测因子。
    在接受SARS-CoV-2感染治疗的患者中,由于与COVID-19治疗相关的长期住院而获得细菌感染并没有提高死亡率。数据表明,在住院第一周后存活的重症COVID-19患者中,细菌感染,特别是肺炎克雷伯菌NDM,不显著影响死亡率。多变量分析表明,年龄,APACHEII得分,和CRP是所有患者组死亡率的预测因子。
    UNASSIGNED: During the coronavirus disease 2019 (COVID-19) pandemic, in patients treated for SARS-CoV-2 infection, infections with the Klebsiella pneumoniae bacteria producing New Delhi metallo-B-lactamase (NDM) carbapenemase in the USA, Brazil, Mexico, and Italy were observed, especially in intensive care units (ICUs). This study aimed to assess the impact of Klebsiella pneumoniae NDM infection and other bacterial infections on mortality in patients treated in ICUs due to COVID-19.
    UNASSIGNED: The 160 patients who qualified for the study were hospitalized in ICUs due to COVID-19. Three groups were distinguished: patients with COVID-19 infection only (N = 72), patients with COVID-19 infection and infection caused by Klebsiella pneumoniae NDM (N = 30), and patients with COVID-19 infection and infection of bacterial etiology other than Klebsiella pneumoniae NDM (N = 58). Mortality in the groups and chosen demographic data; biochemical parameters analyzed on days 1, 3, 5, and 7; comorbidities; and ICU scores were analyzed.
    UNASSIGNED: Bacterial infection, including with Klebsiella pneumoniae NDM type, did not elevate mortality rates. In the group of patients who survived the acute phase of COVID-19 the prolonged survival time was demonstrated: the median overall survival time was 13 days in the NDM bacterial infection group, 14 days in the other bacterial infection group, and 7 days in the COVID-19 only group. Comparing the COVID-19 with NDM infection and COVID-19 only groups, the adjusted model estimated a statistically significant hazard ratio of 0.28 (p = 0.002). Multivariate analysis revealed that age, APACHE II score, and CRP were predictors of mortality in all the patient groups.
    UNASSIGNED: In patients treated for SARS-CoV-2 infection acquiring a bacterial infection due to prolonged hospitalization associated with the treatment of COVID-19 did not elevate mortality rates. The data suggests that in severe COVID-19 patients who survived beyond the first week of hospitalization, bacterial infections, particularly Klebsiella pneumoniae NDM, do not significantly impact mortality. Multivariate analysis revealed that age, APACHE II score, and CRP were predictors of mortality in all the patient groups.
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  • 文章类型: Journal Article
    背景:铜绿假单胞菌(PA)是重症监护病房(ICU)中医疗保健相关感染(PA-HAI)的常见原因。我们旨在描述安大略省ICU中PA-HAI的流行病学,加拿大,并确定我们是否可以识别下沉到患者PA传播的发作。
    方法:这是一项前瞻性队列研究,对2018-2019年6个ICU的患者进行了研究,并检索了PA临床分离株,和PA-筛选抗微生物微生物监测直肠拭子,和水槽排水,空气,和水龙头样品。所有PA分离物进行全基因组测序。PA-HAI是使用美国国家医疗保健安全网络标准定义的。ICU获得的PA定义为从ICU入院后>48小时获得的样本中分离出的PA,这些样本先前直肠拭子为阴性。水槽到患者的PA传播被定义为具有密切的基因组关系的ICU获得的PA,以分离先前在相关患者分离之前3-14天从房间/床空间中的水槽中回收的一种或多种。
    结果:超过10个月,72PA-HAI发生在60/4263入院患者中。PA-HAI的发生率为每1000名患者-ICU天数2.40;入院时PA定植的患者更高。PA-HAI与更长的住院时间相关(中位数26天vs3天未感染,p<0.001),并导致22/60例(36.7%)死亡。确认了58例ICU获得性PA入院,贡献35/72(48.6%)PA-HAI。四名患有5个PA-HAI(6.9%)的患者先前从其房间/床头水槽中恢复了密切相关的分离株。
    结论:近一半的PA引起HAI似乎是在ICU中获得的,7%的PA-HAI与患者之间的传播相关。水槽可能是HAIs的未被认可的储层。
    BACKGROUND: Pseudomonas aeruginosa (PA) is a common cause of healthcare-associated infection (PA-HAI) in the intensive care unit (ICU).
    OBJECTIVE: To describe the epidemiology of PA-HAI in ICUs in Ontario, Canada, and to identify episodes of sink-to-patient PA transmission.
    METHODS: This was a prospective cohort study of patients in six ICUs from 2018 to 2019, with retrieval of PA clinical isolates, and PA-screening of antimicrobial-resistant organism surveillance rectal swabs, and of sink drain, air, and faucet samples. All PA isolates underwent whole-genome sequencing. PA-HAI was defined using US National Healthcare Safety Network criteria. ICU-acquired PA was defined as PA isolated from specimens obtained ≥48 h after ICU admission in those with prior negative rectal swabs. Sink-to-patient PA transmission was defined as ICU-acquired PA with close genomic relationship to isolate(s) previously recovered from sinks in a room/bedspace occupied 3-14 days prior to collection date of the relevant patient specimen.
    RESULTS: Over ten months, 72 PA-HAIs occurred among 60/4263 admissions. The rate of PA-HAI was 2.40 per 1000 patient-ICU-days; higher in patients who were PA-colonized on admission. PA-HAI was associated with longer stay (median: 26 vs 3 days uninfected; P < 0.001) and contributed to death in 22/60 cases (36.7%). Fifty-eight admissions with ICU-acquired PA were identified, contributing 35/72 (48.6%) PA-HAIs. Four patients with five PA-HAIs (6.9%) had closely related isolates previously recovered from their room/bedspace sinks.
    CONCLUSIONS: Nearly half of PA causing HAI appeared to be acquired in ICUs, and 7% of PA-HAIs were associated with sink-to-patient transmission. Sinks may be an under-recognized reservoir for HAIs.
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