Histone Chaperones

组蛋白伴侣
  • 文章类型: Journal Article
    组蛋白伴侣是染色质动力学不可或缺的部分,促进核小体的组装和拆卸,从而在调节基因表达和维持基因组稳定性中起着至关重要的作用。此外,它们在染色质组装之前防止异常的组蛋白相互作用。组蛋白伴侣功能的破坏可能导致基因组不稳定,这与发病机理有关。这篇综述旨在阐明组蛋白伴侣在癌症病理中的作用,并探讨其作为治疗靶点的潜力。已经发现组蛋白伴侣在各种癌症中失调,随着表达水平的改变,突变,或导致肿瘤发生和癌症进展的异常相互作用。此外,这篇综述旨在强调组蛋白伴侣与致癌因子相互作用的分子机制,强调它们在癌细胞存活和增殖中的作用。组蛋白伴侣的失调与癌症发展显着相关,将它们确立为癌症病理的积极贡献者和治疗干预的可行靶标。这篇综述主张继续研究组蛋白伴侣靶向疗法,这在肿瘤学中具有精准医学的潜力。在理解伴侣功能和相互作用方面的未来进步预计将导致新的癌症治疗。加强患者护理和结果。
    Histone chaperones are integral to chromatin dynamics, facilitating the assembly and disassembly of nucleosomes, thereby playing a crucial role in regulating gene expression and maintaining genomic stability. Moreover, they prevent aberrant histone interactions prior to chromatin assembly. Disruption in histone chaperone function may result in genomic instability, which is implicated in pathogenesis. This review aims to elucidate the role of histone chaperones in cancer pathologies and explore their potential as therapeutic targets. Histone chaperones have been found to be dysregulated in various cancers, with alterations in expression levels, mutations, or aberrant interactions leading to tumorigenesis and cancer progression. In addition, this review intends to highlight the molecular mechanisms of interactions between histone chaperones and oncogenic factors, underscoring their roles in cancer cell survival and proliferation. The dysregulation of histone chaperones is significantly correlated with cancer development, establishing them as active contributors to cancer pathology and viable targets for therapeutic intervention. This review advocates for continued research into histone chaperone-targeted therapies, which hold potential for precision medicine in oncology. Future advancements in understanding chaperone functions and interactions are anticipated to lead to novel cancer treatments, enhancing patient care and outcomes.
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  • 文章类型: Journal Article
    组蛋白伴侣和组蛋白变体在DNA复制中起关键作用,基因转录,和真核生物的DNA修复。组蛋白伴侣通过掺入或驱逐组蛋白和组蛋白变体以调节染色质可及性,可逆地促进核小体的组装和分解。从而改变染色质状态并调节DNA相关的生物过程。辅因子帮助组蛋白伴侣靶向特定染色质区域以调节组蛋白和组蛋白变体的交换。在这次审查中,我们总结了植物中组蛋白变异体与伴侣相互作用的最新进展。我们讨论了伴侣-组蛋白复合物的结构基础及其在调节基因转录和植物发育中的合作机制。
    Histone chaperones and histone variants play crucial roles in DNA replication, gene transcription, and DNA repair in eukaryotes. Histone chaperones reversibly promote nucleosome assembly and disassembly by incorporating or evicting histones and histone variants to modulate chromatin accessibility, thereby altering the chromatin states and modulating DNA-related biological processes. Cofactors assist histone chaperones to target specific chromatin regions to regulate the exchange of histones and histone variants. In this review, we summarize recent progress in the interplay between histone variants and chaperones in plants. We discuss the structural basis of chaperone-histone complexes and the mechanisms of their cooperation in regulating gene transcription and plant development.
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  • 文章类型: Journal Article
    RNA聚合酶II(PolII)伸长率影响poly(A)位点选择,缓慢和快速的PolII衍生物导致上游和下游转移,分别,在聚(A)网站利用中。在酵母中,组蛋白伴侣FACT或Spt6的耗尽会导致poly(A)位点的使用向上游转移,这与慢速PolII突变菌株的poly(A)谱非常相似。像慢PolII突变株一样,FACT和Spt6耗尽的细胞表现出PolII持续性缺陷,表明Spt6和FACT均刺激PolII伸长率。某些基因的Poly(A)谱显示出非典型的下游移位;该基因子集与FACT或Spt6缺失的菌株重叠得很好,但与PolII速度突变菌株中的非典型基因不同。相比之下,组蛋白H3或H4的消耗导致大多数基因的poly(A)位点的下游转移,表明核小体在体内抑制PolII的伸长率。因此,基于染色质的PolII伸长率控制是一种潜在的机制,与对裂解/聚腺苷酸化机制的直接影响不同,调节遗传或环境变化的选择性聚腺苷酸化。
    The RNA polymerase II (Pol II) elongation rate influences poly(A) site selection, with slow and fast Pol II derivatives causing upstream and downstream shifts, respectively, in poly(A) site utilization. In yeast, depletion of either of the histone chaperones FACT or Spt6 causes an upstream shift of poly(A) site use that strongly resembles the poly(A) profiles of slow Pol II mutant strains. Like slow Pol II mutant strains, FACT- and Spt6-depleted cells exhibit Pol II processivity defects, indicating that both Spt6 and FACT stimulate the Pol II elongation rate. Poly(A) profiles of some genes show atypical downstream shifts; this subset of genes overlaps well for FACT- or Spt6-depleted strains but is different from the atypical genes in Pol II speed mutant strains. In contrast, depletion of histone H3 or H4 causes a downstream shift of poly(A) sites for most genes, indicating that nucleosomes inhibit the Pol II elongation rate in vivo. Thus, chromatin-based control of the Pol II elongation rate is a potential mechanism, distinct from direct effects on the cleavage/polyadenylation machinery, to regulate alternative polyadenylation in response to genetic or environmental changes.
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  • 文章类型: Journal Article
    高水平的H2A。Z促进黑色素瘤细胞增殖并与不良预后相关。然而,两种截然不同的H2A的作用。黑色素瘤中的Z组蛋白伴侣复合物SRCAP和P400-TIP60仍不清楚。这里,我们表明SRCAP的单个亚基耗尽,P400和VPS72(YL1)不仅导致H2A的损失。Z沉积到染色质中,但也减少了黑素瘤细胞中H4的乙酰化。H4乙酰化的这种丧失尤其在与H2A直接结合的细胞周期基因的启动子处发现。Z和它的监护人,提示H2A之间的协调调节。Z沉积和H4乙酰化促进它们的表达。三个亚基的击倒下调E2F1及其靶标,导致类似于H2A的细胞周期停滞。Z损耗。然而,不像H2A。Z缺乏,共享H2A的损失。Z伴侣亚基YL1诱导细胞凋亡。此外,YL1在黑素瘤组织中过度表达,其上调与患者预后不良有关。一起,这些发现为未来靶向H2A提供了理论基础.Z伴侣作为黑色素瘤治疗的表观遗传策略。
    High levels of H2A.Z promote melanoma cell proliferation and correlate with poor prognosis. However, the role of the two distinct H2A.Z histone chaperone complexes SRCAP and P400-TIP60 in melanoma remains unclear. Here, we show that individual subunit depletion of SRCAP, P400, and VPS72 (YL1) results in not only the loss of H2A.Z deposition into chromatin but also a reduction of H4 acetylation in melanoma cells. This loss of H4 acetylation is particularly found at the promoters of cell cycle genes directly bound by H2A.Z and its chaperones, suggesting a coordinated regulation between H2A.Z deposition and H4 acetylation to promote their expression. Knockdown of each of the three subunits downregulates E2F1 and its targets, resulting in a cell cycle arrest akin to H2A.Z depletion. However, unlike H2A.Z deficiency, loss of the shared H2A.Z chaperone subunit YL1 induces apoptosis. Furthermore, YL1 is overexpressed in melanoma tissues, and its upregulation is associated with poor patient outcome. Together, these findings provide a rationale for future targeting of H2A.Z chaperones as an epigenetic strategy for melanoma treatment.
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  • 文章类型: Journal Article
    组蛋白H3/H4分子伴侣ASF1是介导核小体组装和分解的保守因子,在复制等过程中发挥关键作用,转录,DNA修复然而,它与衰老的关系尚不清楚。这里,我们利用模型生物秀丽隐杆线虫证明ASF1同源物UNC-85的缺失导致多细胞生物的寿命缩短.此外,我们表明UNC-85是表观基因组介导的长寿所必需的,因为H3K4甲基转移酶ash-2的敲减不会延长unc-85突变体的寿命。在这种情况下,我们发现,促进寿命的ash-2RNAi通过增加其核定位来增强UNC-85的活性。最后,我们的数据表明,UNC-85的丢失增加了一碳代谢(OCM)的活性,OCM组分dao-3/MTHFD2的下调部分挽救了unc-85突变体的短寿命。一起,这些发现揭示了UNC-85/ASF1作为中枢代谢途径的调节剂和调节促长寿反应的因子,从而揭示了核小体维持与衰老的关系。
    Histone H3/H4 chaperone anti-silencing function 1 (ASF1) is a conserved factor mediating nucleosomal assembly and disassembly, playing crucial roles in processes such as replication, transcription, and DNA repair. Nevertheless, its involvement in aging has remained unclear. Here, we utilized the model organism Caenorhabditis elegans to demonstrate that the loss of UNC-85, the homolog of ASF1, leads to a shortened lifespan in a multicellular organism. Furthermore, we show that UNC-85 is required for epigenome-mediated longevity, as knockdown of the histone H3 lysine K4 methyltransferase ash-2 does not extend the lifespan of unc-85 mutants. In this context, we found that the longevity-promoting ash-2 RNA interference enhances UNC-85 activity by increasing its nuclear localization. Finally, our data indicate that the loss of UNC-85 increases the activity of one-carbon metabolism, and that downregulation of the one-carbon metabolism component dao-3/MTHFD2 partially rescues the short lifespan of unc-85 mutants. Together, these findings reveal UNC-85/ASF1 as a modulator of the central metabolic pathway and a factor regulating a pro-longevity response, thus shedding light on a mechanism of how nucleosomal maintenance associates with aging.
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  • 文章类型: Preprint
    DNA复制过程中从头染色质组装的长期扰动对表观基因组维持和细胞命运具有深远的影响。这些缺陷的早期机制起源是未知的。这里,我们结合了染色质组装因子1(CAF-1)的急性降解,从头染色质组装的关键人物,单细胞基因组学,定量蛋白质组学,和活显微镜来揭示人类细胞中的这些启动机制。CAF-1的丢失会立即减慢DNA复制速度,并使新生的DNA变得非常容易接近。快速的细胞反应,不同于典型的DNA损伤信号,被触发并降低组蛋白mRNA。因此,组蛋白变体的使用及其修改被改变,限制转录保真度和延迟染色质成熟在一个单一的S期。这种多级反应诱导有丝分裂后的细胞周期停滞。我们的工作揭示了DNA复制过程中从头染色质组装缺陷的直接后果,解释表观基因组和细胞命运如何在以后改变。
    Long-term perturbation of de novo chromatin assembly during DNA replication has profound effects on epigenome maintenance and cell fate. The early mechanistic origin of these defects is unknown. Here, we combine acute degradation of Chromatin Assembly Factor 1 (CAF-1), a key player in de novo chromatin assembly, with single-cell genomics, quantitative proteomics, and live-microscopy to uncover these initiating mechanisms in human cells. CAF-1 loss immediately slows down DNA replication speed and renders nascent DNA hyperaccessible. A rapid cellular response, distinct from canonical DNA damage signaling, is triggered and lowers histone mRNAs. As a result, histone variants usage and their modifications are altered, limiting transcriptional fidelity and delaying chromatin maturation within a single S-phase. This multi-level response induces a cell-cycle arrest after mitosis. Our work reveals the immediate consequences of defective de novo chromatin assembly during DNA replication, explaining how at later times the epigenome and cell fate can be altered.
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  • 文章类型: Review
    组蛋白伴侣在维持人体生理过程中起着关键作用。它们以稳定的方式与组蛋白相互作用,确保DNA复制的准确和有效执行,修复和转录。视网膜母细胞瘤结合蛋白(RBBP)4和RBBP7代表一对关键的组蛋白伴侣,它不仅控制组蛋白H3和H4的分子行为,而且还参与几种蛋白质复合物的功能,如多梳抑制复合物2和核小体重塑和脱乙酰酶,从而调节细胞周期,组蛋白修饰,DNA损伤与细胞命运RBBP4/7与一些主要的人类疾病之间有很强的关联,比如癌症,与年龄相关的记忆丧失和传染病。本综述评估了RBBP4/7在调节细胞生物学过程中的分子机制。并重点研究了RBBP4/7表达的变化及其在各种人类疾病中的潜在机制,从而为他们的诊断和治疗提供新的见解。
    Histone chaperones serve a pivotal role in maintaining human physiological processes. They interact with histones in a stable manner, ensuring the accurate and efficient execution of DNA replication, repair and transcription. Retinoblastoma binding protein (RBBP)4 and RBBP7 represent a crucial pair of histone chaperones, which not only govern the molecular behavior of histones H3 and H4, but also participate in the functions of several protein complexes, such as polycomb repressive complex 2 and nucleosome remodeling and deacetylase, thereby regulating the cell cycle, histone modifications, DNA damage and cell fate. A strong association has been indicated between RBBP4/7 and some major human diseases, such as cancer, age‑related memory loss and infectious diseases. The present review assesses the molecular mechanisms of RBBP4/7 in regulating cellular biological processes, and focuses on the variations in RBBP4/7 expression and their potential mechanisms in various human diseases, thus providing new insights for their diagnosis and treatment.
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  • 文章类型: Journal Article
    肝细胞癌(HCC)是一种预后不良的恶性肿瘤。H3-H4组蛋白伴侣的异常表达已在许多癌症中被鉴定,并有望作为诊断和预后的生物标志物。然而,HCC中H3-H4组蛋白伴侣的系统分析仍然缺乏。这里,我们研究了19种已知的H3-H4组蛋白伴侣在HCC中的表达。多个公共数据库的综合分析表明,这些分子伴侣在肝癌肿瘤组织中高表达,通过离线样品中的免疫组织化学(IHC)染色进一步验证。此外,生存分析提示H3-H4组蛋白伴侣上调的HCC患者预后不良。使用LASSO和Cox回归,我们构建了一个双基因模型(ASF1A,HJURP)准确预测ICGC-LIRI和GEOHCC数据的预后,这在具有随访信息的HCC组织微阵列中得到了进一步验证。GSEA显示,高风险组中的HCC与细胞周期进程和DNA复制增强有关。有趣的是,高风险组中的HCC表现出增加的免疫浸润和对免疫检查点治疗(ICT)的敏感性。总之,H3-H4组蛋白伴侣在肝癌进展中起关键作用,和双基因(ASF1A,HJURP)风险模型可有效预测HCC患者的生存结果和对免疫治疗的敏感性。
    Hepatocellular carcinoma (HCC) is a malignancy with poor prognosis. Abnormal expression of H3-H4 histone chaperones has been identified in many cancers and holds promise as a biomarker for diagnosis and prognosis. However, systemic analysis of H3-H4 histone chaperones in HCC is still lacking. Here, we investigated the expression of 19 known H3-H4 histone chaperones in HCC. Integrated analysis of multiple public databases indicated that these chaperones are highly expressed in HCC tumor tissues, which was further verified by immunohistochemistry (IHC) staining in offline samples. Additionally, survival analysis suggested that HCC patients with upregulated H3-H4 histone chaperones have poor prognosis. Using LASSO and Cox regression, we constructed a two-gene model (ASF1A, HJURP) that accurately predicts prognosis in ICGC-LIRI and GEO HCC data, which was further validated in HCC tissue microarrays with follow-up information. GSEA revealed that HCCs in the high-risk group were associated with enhanced cell cycle progression and DNA replication. Intriguingly, HCCs in the high-risk group exhibited increased immune infiltration and sensitivity to immune checkpoint therapy (ICT). In summary, H3-H4 histone chaperones play a critical role in HCC progression, and the two-gene (ASF1A, HJURP) risk model is effective for predicting survival outcomes and sensitivity to immunotherapy for HCC patients.
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  • 文章类型: Journal Article
    DNA复制过程中的核小体组装依赖于组蛋白伴侣。最近的研究表明,失调的组蛋白伴侣有助于癌症进展,包括胃癌(GC)。需要进一步的研究来探索组蛋白伴侣的预后和治疗意义及其在GC进展中的作用机制。在这里,我们确定组蛋白伴侣ASF1B作为GC增殖和预后的潜在生物标志物。ASF1B在GC中显著上调,这与不良预后有关。体外和体内实验表明,抑制ASF1B抑制GC的恶性特征,而过表达ASF1B则有相反的作用。机械上,转录因子FOXM1直接与ASF1B启动子区结合,从而调节其转录。用硫链菌素治疗,FOXM1抑制剂,不仅抑制了ASF1B的表达,但也抑制GC进展。此外,ASF1B以FOXM1依赖性方式调节线粒体蛋白过氧化物氧还蛋白3(PRDX3)转录。还阐明了ASF1B调节的PRDX3在GC细胞增殖和氧化应激平衡中的关键作用。总之,我们的研究提示FOXM1-ASF1B-PRDX3轴是治疗GC的潜在治疗靶点.
    Nucleosome assembly during DNA replication is dependent on histone chaperones. Recent studies suggest that dysregulated histone chaperones contribute to cancer progression, including gastric cancer (GC). Further studies are required to explore the prognostic and therapeutic implications of histone chaperones and their mechanisms of action in GC progression. Here we identified histone chaperone ASF1B as a potential biomarker for GC proliferation and prognosis. ASF1B was significantly upregulated in GC, which was associated with poor prognosis. In vitro and in vivo experiments demonstrated that the inhibition of ASF1B suppressed the malignant characteristics of GC, while overexpression of ASF1B had the opposite effect. Mechanistically, transcription factor FOXM1 directly bound to the ASF1B-promoter region, thereby regulating its transcription. Treatment with thiostrepton, a FOXM1 inhibitor, not only suppressed ASF1B expression, but also inhibited GC progression. Furthermore, ASF1B regulated the mitochondrial protein peroxiredoxin 3 (PRDX3) transcription in a FOXM1-dependent manner. The crucial role of ASF1B-regulated PRDX3 in GC cell proliferation and oxidative stress balance was also elucidated. In summary, our study suggests that the FOXM1-ASF1B-PRDX3 axis is a potential therapeutic target for treating GC.
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  • 文章类型: Journal Article
    目的:醋酸甲地孕酮(MA)用于治疗晚期癌症患者的厌食和恶病质。这项研究调查了转移性胃癌患者MA的处方模式,以及评估其对生存结局和静脉血栓栓塞(VTE)发生率的影响。
    方法:使用健康保险审查和评估(HIRA)服务数据库来调查基线特征的差异,生存,以及根据MA处方模式的VTE发生率(即,处方vs.2014年7月至2015年12月诊断为转移性胃癌的患者没有处方)。
    结果:本研究共纳入1938例患者。总的来说,65%的患者被处方为MA。年纪大了,在三级医院治疗,和姑息性化疗是MA处方的有统计学意义的预测因素。在37%的患者中观察到MA的连续处方。在多变量分析中,MA和非MA处方组之间的生存率没有统计学上的显着差异。在纳入VTE发病率分析的1427例患者中,在MA和非MA处方组中,在随访期间诊断为VTE的分别为4.3%和2.9%,分别。然而,在多因素分析中,两组间VTE诊断差异无统计学意义.
    结论:MA通常用于转移性胃癌,尤其是老年患者和接受姑息化疗的患者,而不会显著影响生存率或VTE风险。
    OBJECTIVE: Megestrol acetate (MA) is used to manage anorexia and cachexia in patients with advanced cancer. This study investigated the prescription patterns of MA in patients with metastatic gastric cancer, as well as evaluated its impact on survival outcomes and the incidence of venous thromboembolism (VTE).
    METHODS: A Health Insurance Review and Assessment (HIRA) service database was used to investigate differences in baseline characteristics, survival, and the incidence of VTE according to MA prescription patterns (i.e., prescription vs. no prescription) in patients diagnosed with metastatic gastric cancer from July 2014 to December 2015.
    RESULTS: A total of 1938 patients were included in this study. In total, 65% of the patients were prescribed MA. Older age, treatment in tertiary hospitals, and palliative chemotherapy were statistically significant predictive factors for MA prescription. Continuous prescription of MA was observed in 37% of patients. There was no statistically significant difference in survival between the MA and non-MA prescription groups on multivariate analysis. Among the 1427 patients included in the analysis for VTE incidence, 4.3% and 2.9% were diagnosed with VTE during the follow-up period in the MA and non-MA prescription groups, respectively. However, there was no statistically significant difference in VTE diagnosis between the groups on multivariate analysis.
    CONCLUSIONS: MA is commonly prescribed for metastatic gastric cancer, especially in elderly patients and those undergoing palliative chemotherapy, without significantly affecting survival or VTE risk.
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