Fermentative production

发酵生产
  • 文章类型: English Abstract
    作为唯一含有元素硫的必需氨基酸,L-蛋氨酸在生物体内具有重要的生理生化功能。然而,发酵生产L-蛋氨酸的生产水平较低,已不能满足工业生产的要求。在本文中,系统优化了先前构建的高效L-蛋氨酸生产菌株大肠杆菌W3110ΔIJAHFEBCtrc-flytrc-malY/PAMglyA-22metF的发酵过程。基于最佳的初始葡萄糖浓度,不同补料分批发酵工艺的影响,包括DO-Stat,pH-Stat,控制不同水平的残余糖控制和恒定速率的葡萄糖喂养,对L-蛋氨酸发酵进行了研究。发现葡萄糖浓度的控制极大地影响了发酵过程。随后,开发了一种最佳的补料分批发酵工艺,其中L-蛋氨酸滴度增加到31.71g/L,迄今为止报道的最高产量,发酵时间缩短至68h。同时,建立了最佳补料分批发酵条件下的发酵动力学模型,这与L-蛋氨酸的生物合成过程非常吻合。这项研究可能有助于L-蛋氨酸发酵生产的进一步发展。
    As the only essential amino acid containing elemental sulphur, L-methionine has important physiological and biochemical functions in living organisms. However, the fermentative production of L-methionine has not met the requirements of industrial production because of its low production level. In this paper, the fermentation process of an efficient L-methionine producing strain E. coli W3110ΔIJAHFEBC trc-fliY trc-malY/PAM glyA-22 metF constructed previously was systematically optimized. Based on the optimal initial glucose concentration, the effects of different fed-batch fermentation processes, including DO-Stat, pH-Stat, controlling residual sugar control at different level and feeding glucose with constant rate, on L-methionine fermentation were studied. It was found that the control of glucose concentration greatly affected the fermentation process. Subsequently, an optimal fed-batch fermentation process was developed, where the L-methionine titer was increased to 31.71 g/L, the highest yield reported to date, while the fermentation time was shortened to 68 h. Meanwhile, a fermentation kinetics model under the optimal fed-batch fermentation conditions was established, which fitted well with the biosynthesis process of L-methionine. This study may facilitate further development of the fermentative production of L-methionine.
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  • 文章类型: Review
    L-色氨酸是一种必需氨基酸,在食品中广泛使用,医药和饲料部门。L-色氨酸可以通过发酵生产,主要生产菌株是工程大肠杆菌和谷氨酸棒杆菌,通过基于代谢工程和合成生物学的合理设计方法构建。然而,由于漫长的代谢途径,微生物细胞中L-色氨酸产生的调控机制复杂而不明确,L-色氨酸生产菌株的生产效率和稳健性仍然很低。在这方面,不合理的设计方法,如实验室自适应进化,通常用于改善L-色氨酸生产菌株的性能。本文综述了L-色氨酸的生物合成代谢及其调控的最新进展,L-色氨酸产生菌的构建与优化,发酵生产L-色氨酸,并展望未来发展前景。本文的综述可能有助于发酵生产L-色氨酸的研究和开发。
    L-tryptophan is an essential amino acid that is widely used in food, medicine and feed sectors. L-tryptophan can be produced through fermentation, and the main producing strains are engineered Escherichia coli and Corynebacterium glutamicum, which are constructed by rational design methods based on metabolic engineering and synthetic biology. However, due to the long metabolic pathway, complex and unclear regulatory mechanism for L-tryptophan production in microbial cells, the production efficiency and robustness of L-tryptophan producing strains are still low. In this connection, irrational design methods such as laboratory adaptive evolution, are often applied to improve the performance of L-tryptophan producing strains. This review summarizes the recent progress on biosynthesis metabolism of L-tryptophan and its regulation, the construction and optimization of L-tryptophan producing strains, and fermentative production of L-tryptophan, and prospects future development perspective. This review may facilitate research and development for fermentative production of L-tryptophan.
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  • 文章类型: Journal Article
    姜黄素是一种具有多种健康益处的多目标营养食品,然而,由于水溶性差和生物利用度降低,其功效有限。虽然纳米配方已成为遇到此类问题的替代方法,它通常涉及使用有毒溶剂。微生物合成可能是解决这一空白的创新解决方案。目前的研究,第一次,报道了利用出芽梭菌RBF4A3生产纳米姜黄素。为此,在YPD培养基中与姜黄素(0.1mg/mL)一起接种出芽梭菌RBF4A3并孵育24小时,48h,和72小时。随后,残糖,生物量,EPS浓度,姜黄素浓度,并测量姜黄素纳米颗粒的尺寸。因此,72h后得到平均粒径为31.63nm、水溶性增强的纳米姜黄素。调查显示普鲁兰,一种还原性多糖,在姜黄素纳米制剂中发挥了重要作用。普鲁兰多糖介导的纳米姜黄素制剂,平均粒径为24nm,转化率约为59.19%,表明水溶性得到改善。此外,所得纳米姜黄素的抗氧化剂含量约为53.7%/μg。此外,基于普鲁兰的纳米姜黄素的动力学和热力学研究表明,它遵循一级动力学,并且受到高温有效生物转化的青睐。此外,各种物理化学研究,如FT-IR,NMR,和XRD显示支链淀粉骨架在形成姜黄素纳米颗粒时保持完整。这项研究可能为通过完全绿色和无溶剂的方法合成纳米多酚开辟新的途径,并具有多种应用。
    Curcumin is a multitargeting nutraceutical with numerous health benefits, however, its efficacy is limited due to poor aqueous solubility and reduced bioavailability. While nano-formulation has emerged as an alternative to encounter such issues, it often involves use of toxic solvents. Microbial synthesis may be an innovative solution to address this lacuna. Present study, for the first time, reports exploitation of Aureobasidium pullulans RBF4A3 for production of nano-curcumin. For this purpose, Aureobasidium pullulans RBF4A3 was inoculated in YPD media along with curcumin (0.1 mg/mL) and incubated for 24 h, 48 h, and 72 h. Subsequently, residual sugar, biomass, EPS concentration, curcumin concentration, and curcumin nanoparticle size were measured. As a result, nano-curcumin with an average particle size of 31.63 nm and enhanced aqueous solubility was obtained after 72 h. Further, investigations suggested that pullulan, a reducing polysaccharide, played a significant role in curcumin nano-formulation. Pullulan-mediated nano-curcumin formulation, with an average particle size of 24 nm was achieved with conversion rate of around 59.19 %, suggesting improved aqueous solubility. Additionally, the anti-oxidant assay of the resulting nano-curcumin was around 53.7 % per μg. Moreover, kinetics and thermodynamic studies of pullulan-based nano-curcumin revealed that it followed first-order kinetics and was favored by elevated temperature for efficient bio-conversion. Also, various physico-chemical investigations like FT-IR, NMR, and XRD reveal that pullulan backbone remains intact while forming curcumin nanoparticle. This study may open up new avenues for synthesizing nano-polyphenols through a completely green and solvent free process with plausible diverse applications.
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  • 文章类型: Journal Article
    在利用微生物发酵生产化合物中,控制负责底物摄取和产物流出的转运蛋白活性,除了细胞内代谢修饰,从生产力的角度来看很重要。然而,在分析微生物膜转运蛋白的功能方面进展甚微,由于很难找到运输目标化合物的转运蛋白,只有少数运输机投入实际使用。这里,我们构建了具有融合伴侣基因mstX的谷氨酸棒杆菌衍生的转运蛋白表达文库(CgTP-Express文库),并使用二肽L-Ala-L-Ala的肽喂养方法在文库中搜索丙氨酸出口商。在文库中的39个基因中,发现了五个候选丙氨酸出口商(NCgl2533,NCgl2683,NCgl0986,NCgl0453和NCgl0929);NCgl2533的表达增加了细胞培养物中的丙氨酸浓度。因此,CgTP-Express文库对于寻找新的转运蛋白候选是有效的。
    In the fermentative production of compounds by using microorganisms, control of the transporter activity responsible for substrate uptake and product efflux, in addition to intracellular metabolic modification, is important from a productivity perspective. However, there has been little progress in analyses of the functions of microbial membrane transporters, and because of the difficulty in finding transporters that transport target compounds, only a few transporters have been put to practical use. Here, we constructed a Corynebacterium glutamicum-derived transporter expression library (CgTP-Express library) with the fusion partner gene mstX and used a peptide-feeding method with the dipeptide L-Ala-L-Ala to search for alanine exporters in the library. Among 39 genes in the library, five candidate alanine exporters (NCgl2533, NCgl2683, NCgl0986, NCgl0453, and NCgl0929) were found; expression of NCgl2533 increased the alanine concentration in cell culture. The CgTP-Express library was thus effective for finding a new transporter candidate.
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  • 文章类型: Journal Article
    吲哚在自然界中由多种生物产生,并表现出被描述为动物的特征气味,粪便,和花卉。此外,它有助于食物的味道,并应用于香精香料行业。在大自然中,吲哚由细菌色氨酸酶(TNA)从色氨酸合成,或由植物吲哚-3-甘油磷酸裂解酶(IGL)从吲哚-3-甘油磷酸(IGP)合成。虽然人们普遍认为色氨酸合酶α亚基(TSA)在不存在色氨酸合酶β亚基的情况下具有固有的低IGL活性,在这项研究中,我们表明,谷氨酸棒杆菌TSA的功能是真正的IGL,并且可以支持提供IGP的菌株中发酵吲哚的生产。通过生物勘探,鉴定了其他具有真正IGL功能的细菌TSA和植物IGL。在使用表达内源TSA基因或来自小麦的IGL基因的谷氨酸棒杆菌菌株的发酵中,在覆盖层中捕获吲哚使得吲哚产量能够达到约0.7gL-1的滴度。
    Indole is produced in nature by diverse organisms and exhibits a characteristic odor described as animal, fecal, and floral. In addition, it contributes to the flavor in foods, and it is applied in the fragrance and flavor industry. In nature, indole is synthesized either from tryptophan by bacterial tryptophanases (TNAs) or from indole-3-glycerol phosphate (IGP) by plant indole-3-glycerol phosphate lyases (IGLs). While it is widely accepted that the tryptophan synthase α-subunit (TSA) has intrinsically low IGL activity in the absence of the tryptophan synthase β-subunit, in this study, we show that Corynebacterium glutamicum TSA functions as a bona fide IGL and can support fermentative indole production in strains providing IGP. By bioprospecting additional bacterial TSAs and plant IGLs that function as bona fide IGLs were identified. Capturing indole in an overlay enabled indole production to titers of about 0.7 g L-1 in fermentations using C. glutamicum strains expressing either the endogenous TSA gene or the IGL gene from wheat.
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  • 文章类型: Journal Article
    米糠的使用潜力,农业废弃物,作为底物的结冷胶的制造进行了检查。使用标准菌株的鞘氨醇单胞菌(ATCC31461)和米糠底物,在优化条件下制备结冷胶。发现使用米糠底物的结冷胶的最佳产量为11.96gL-1,含5%葡萄糖,10%接种物,和300rpm的混合速度。发现天然树胶具有2.00Pa的稠度指数。sn.发现当暴露于热应力时,树胶的粘度非常稳定。关于流变特性,Herschel-Bulkley模型提供了更真实的树胶溶液流动特性表示。合成的树胶主要由葡萄糖组成,鼠李糖,和葡萄糖醛酸。结冷胶的乙酸含量为2.95%,分子量为2.88×105Da。通过UV-Vis光谱表征天然结冷胶,SEM,还提供了TEM和FTIR光谱。
    The potential for the use of rice bran, an agricultural waste, as a substrate in the manufacture of gellan gum was examined. Using a standard strain of Sphingomonas paucimobilis (ATCC 31461) and rice bran substrate, gellan gum was produced under optimized conditions. The optimal yield of gellan gum using rice bran substrate was found to be 11.96 g L-1 with 5% glucose, 10% inoculum, and a mixing speed of 300 rpm. Native gum was found to have a consistency index of 2.00 Pa.sn. The viscosity of the gum was found to be extremely stable when exposed to thermal stress. Concerning the rheological characteristics, the Herschel-Bulkley model offered a more realistic representation of the flow characteristics of gum solutions. The synthesized gums were mostly composed of glucose, rhamnose, and glucuronic acid. The acetic acid content of gellan gums was 2.95%, while the molecular weight was 2.88 × 105 Da. Characterization of native gellan gums by UV-Vis spectroscopy, SEM, TEM and FTIR spectroscopy is also presented.
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  • 文章类型: Journal Article
    N-alkylated amino acids are intermediates of natural biological pathways and can be found incorporated in peptides or have physiological roles in their free form. The N-ethylated amino acid l-theanine shows taste-enhancing properties and health benefits. It naturally occurs in green tea as major free amino acid. Isolation of l-theanine from Camilla sinensis shows low efficiency, and chemical synthesis results in a racemic mixture. Therefore, biochemical approaches for the production of l-theanine gain increasing interest. Here, we describe metabolic engineering of Pseudomonas putida KT2440 for the fermentative production of l-theanine from monoethylamine and carbon sources glucose, glycerol, or xylose using heterologous enzymes from Methylorubrum extorquens for l-theanine production and heterologous enzymes from Caulobacter crescentus for growth with xylose. l-Theanine (15.4 mM) accumulated in shake flasks with minimal medium containing monoethylamine and glucose, 15.2 mM with glycerol and 7 mM with xylose. Fed-batch bioreactor cultures yielded l-theanine titers of 10 g L-1 with glucose plus xylose, 17.2 g L-1 with glycerol, 4 g L-1 with xylose, and 21 g L-1 with xylose plus glycerol, respectively. To the best of our knowledge, this is the first l-theanine process using P. putida and the first compatible with the use of various alternative carbon sources.
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  • 文章类型: Journal Article
    茶氨酸是茶叶中含量最丰富的游离氨基酸,具有多种生理和药理作用。γ-谷氨酰甲基酰胺合成酶(GMAS)的细菌酶可以催化谷氨酸合成茶氨酸,乙胺和ATP,但是由于昂贵的衬底和复杂的工艺,制造成本没有竞争力。在这项研究中,我们描述了从糖和乙胺一步发酵生产茶氨酸的野生型大肠杆菌的途径工程。首先,茶氨酸的合成途径是通过异源引入来自氨基副球菌的新型GMAS进行的。使用木糖诱导的T7RNA聚合酶-PT7启动子系统来增强和控制gmas基因表达。接下来,通过天然柠檬酸合酶的过表达和谷氨酸棒杆菌的谷氨酸脱氢酶的引入,前体谷氨酸池增加。然后,为了推动更多的碳通量流向茶氨酸合成,中断三羧酸循环,引入来自谷氨酸棒杆菌的丙酮酸羧化酶作为旁路,从丙酮酸中供应草酰乙酸。最后,引入了一种节能的琥珀酸曼海姆氏菌磷酸烯醇丙酮酸羧激酶,以提高茶氨酸合成的ATP产量。优化了补料分批发酵中盐酸乙胺的添加时间和浓度,重组菌株TH11在5升生物反应器中产生70.6g/L茶氨酸,产量和生产率为0.42g/g葡萄糖和2.72g/L/h,分别。据我们所知,这是关于大肠杆菌发酵生产茶氨酸的途径工程的首次报道。重组菌株的高生产能力,结合简单的过程,未来将具有诱人的工业应用潜力。
    L-theanine is the most abundant free amino acid in tea that offers various favorable physiological and pharmacological effects. Bacterial enzyme of γ-glutamylmethylamide synthetase (GMAS) can catalyze the synthesis of theanine from glutamate, ethylamine and ATP, but the manufacturing cost is uncompetitive due to the expensive substrates and complex processes. In this study, we described pathway engineering of wild-type Escherichia coli for one-step fermentative production of theanine from sugars and ethylamine. First, the synthetic pathway of theanine was conducted by heterologous introduction of a novel GMAS from Paracoccus aminovorans. A xylose-induced T7 RNA polymerase-P T7 promoter system was used to enhance and control gmas gene expression. Next, the precursor glutamate pool was increased by overexpression of native citrate synthase and introduction of glutamate dehydrogenase from Corynebacterium glutamicum. Then, in order to push more carbon flux towards theanine synthesis, the tricarboxylic acid cycle was interrupted and pyruvate carboxylase from C. glutamicum was introduced as a bypath supplying oxaloacetate from pyruvate. Finally, an energy-conserving phosphoenolpyruvate carboxykinase from Mannheimia succiniciproducens was introduced to increase ATP yield for theanine synthesis. After optimizing the addition time and concentration of ethylamine hydrochloride in the fed-batch fermentation, the recombinant strain TH11 produced 70.6 ​g/L theanine in a 5-L bioreactor with a yield and productivity of 0.42 ​g/g glucose and 2.72 ​g/L/h, respectively. To our knowledge, this is the first report regarding the pathway engineering of E. coli for fermentative production of theanine. The high production capacity of recombinant strain, combined with the easy processes, will hold attractive industrial application potential for the future.
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  • 文章类型: Journal Article
    已经使用大肠杆菌建立了L-半胱氨酸的发酵生产。在这个过程中,硫代硫酸盐是一种有益的硫源,而抑制硫酸盐的利用。我们首先发现硫代硫酸盐降低了与硫同化相关的基因的转录水平,特别是其表达受转录因子CysB控制。因此,一种新颖的方法,即增加参与硫同化的基因的表达,试图进一步改善L-半胱氨酸的过度生产。rppH基因的破坏显着增加了cysD的转录水平,cysJ,含有硫酸盐作为唯一硫源的培养基中的cysM和yeeE基因(≥1.5倍),可能是因为rppH基因编码触发某些mRNA降解的mRNA焦磷酸水解酶。此外,ΔrppH菌株似乎优先吸收硫代硫酸盐而不是硫酸盐,尽管硫代硫酸盐显着降低了ΔrppH和野生型细胞中已知的硫酸盐/硫代硫酸盐转运蛋白复合物的表达。我们还发现,在硫代硫酸盐作为唯一硫源的存在下,没有转运蛋白的菌株需要YeeE和YeeD。因此,yeeE和yeeD被指定为负责硫代硫酸盐摄取的基因(tsuA和tsuB,分别)。最后,我们将ΔrppH菌株应用于L-半胱氨酸的发酵生产。rppH基因的破坏增强了L-半胱氨酸的生物合成,因此,获得了产生约两倍于对照菌株的L-半胱氨酸的菌株。
    Fermentative production of L-cysteine has been established using Escherichia coli. In that procedure, thiosulfate is a beneficial sulfur source, whereas repressing sulfate utilization. We first found that thiosulfate decreased transcript levels of genes related to sulfur assimilation, particularly whose expression is controlled by the transcription factor CysB. Therefore, a novel approach, i.e. increment of expression of genes involved in sulfur-assimilation, was attempted for further improvement of L-cysteine overproduction. Disruption of the rppH gene significantly augmented transcript levels of the cysD, cysJ, cysM and yeeE genes (≥1.5-times) in medium containing sulfate as a sole sulfur source, probably because the rppH gene encodes mRNA pyrophosphohydrolase that triggers degradation of certain mRNAs. In addition, the ΔrppH strain appeared to preferentially uptake thiosulfate rather than sulfate, though thiosulfate dramatically reduced expression of the known sulfate/thiosulfate transporter complexes in both ΔrppH and wild-type cells. We also found that both YeeE and YeeD are required for the strain without the transporters to grow in the presence of thiosulfate as a sole sulfur source. Therefore, yeeE and yeeD are assigned as genes responsible for thiosulfate uptake (tsuA and tsuB, respectively). In final, we applied the ΔrppH strain to the fermentative production of L-cysteine. Disruption of the rppH gene enhanced L-cysteine biosynthesis, as a result, a strain producing approximately twice as much L-cysteine as the control strain was obtained.
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  • 文章类型: Journal Article
    这里,研究了大肠杆菌菌株中含硫氨基酸吸收的蛋白质,目的是将这些发现应用于发酵氨基酸生产。在l-蛋氨酸营养缺陷型菌株文库中搜索基因表明YecSC是l-半胱氨酸的推定转运蛋白。在生产菌株中扩增yecSC后,l-蛋氨酸的产量增加了15%。通过利用从由l-半胱氨酸营养缺陷型引起的生长缺陷中恢复的多拷贝抑制大肠杆菌菌株的实验,也发现了负责l-半胱氨酸摄取的候选蛋白。根据摄取测定的结果,使用l-半胱氨酸作为唯一的硫源生长,和对l-半胱氨酸毒性的敏感性,我们提出YeaN是一种l-半胱氨酸转运蛋白。由于破坏了生产菌株中的yeaN,l-半胱氨酸产量增加了50%。氨基酸转运蛋白的研究对于工业化氨基酸生产具有重要意义,并且还阐明了这些转运蛋白在硫同化中的作用。
    Here, proteins involved in sulfur-containing amino acid uptake in Escherichia coli strains were investigated with the aim of applying the findings in fermentative amino acid production. A search of genes in an l-methionine auxotrophic strain library suggested YecSC as the putative transporter of l-cystathionine. l-Methionine production increased by 15% after amplification of yecSC in producer strains. A candidate protein responsible for l-cysteine uptake was also found by experimentation with multicopy suppressor E. coli strains that recovered from growth defects caused by l-cysteine auxotrophy. Based on the results of an uptake assay, growth using l-cysteine as a sole sulfur source, and sensitivity to l-cysteine toxicity, we proposed that YeaN is an l-cysteine transporter. l-Cysteine production increased by 50% as a result of disrupting yeaN in producer strain. The study of amino acid transporters is valuable to industrialized amino acid production and also sheds light on the role of these transporters in sulfur assimilation.
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