背景:脱落酸(ABA)是一种植物激素,在植物抗旱性中起重要作用,盐度,冷,和病原体。它对于调节植物生长和发育也很重要。Pyrabactin抗性/pyr1样/ABA受体的调节成分(PYL/RCAR)是植物中的ABA受体蛋白,是植物调节因子中ABA信号转导途径的核心。目前,没有关于苦荞麦PYL家族的报道。
结果:在这项研究中,在全基因组水平上鉴定了荞麦中的19个同源形式PYL基因,并根据它们在染色体上的位置将其命名为FtPYL1-FtPYL19。我们进一步分析了基因结构,保守的图案,顺式作用元素,基因复制,系统发育关系,苦荞麦19个旁系形式PYL基因在不同胁迫处理下和籽粒发育过程中的表达模式。FtPYL基因表现出单个外显子基因结构,占总旁系同源形式的重复形式的约68.4%。其余的子家族,比如I和II,包含三个外显子和两个外显子(例如,FtPYL19),分别。19个FtPYL基因在8条染色体上均匀分布,每个染色体上至少有一个FtPYL基因。在FtPYL基因家族中,有一个串联重复事件和五个基因重复事件。我们研究了FtPYL基因在四种非生物胁迫和籽粒发育不同阶段下的基因表达水平。在干旱胁迫下(PEG6000),FtPYL14和FtPYL15的相对表达水平增加了四倍。高温应力(38℃)下,FtPYL16的相对表达水平下降到0.12,FtPYL17的相对表达水平下降到0.22。在粮食发育的不同阶段,FtPY15的基因表达水平在19D时非常高。根和茎中FtPYL7的相对表达水平高达约450,而13D中FtPYL10的相对表达水平也高达248。在这项研究中,基于全基因组对苦荞麦PYL基因家族进行鉴定和分析,并对苦荞麦的19个同源型FtPYL基因进行了生物信息学分析。分析了苦荞麦品种在不同胁迫处理和籽粒发育过程中19个旁系FtPYL基因的表达模式。发现FtPYL基因在籽粒发育中起着重要作用。
BACKGROUND: Abscisic acid (ABA) is a plant hormone that plays an important role in plant resistance to drought, salinity, cold, and pathogens. It is also important for regulating plant growth and development. Pyrabactin resistance/pyr1-like/regulatory components of the ABA receptor (PYL/RCAR) are ABA receptor proteins in plants and the core of ABA signal transduction pathways in plant regulatory factors. At present, there are no reports on the PYL family of Tartary buckwheat.
RESULTS: In this study, 19 paralogous form PYL genes in buckwheat were identified at the whole-genome level and named FtPYL1-FtPYL19 according to their positions on chromosomes. We further analyzed the gene structure, conserved motifs, cis-acting elements, gene duplication, phylogenetic relationships, and expression patterns under different stress treatments and during grain development of the 19 paralogous form PYL genes in Tartary buckwheat. The FtPYL gene exhibits a single exonic gene structure for about 68.4% of the duplicated forms from the total paralogous forms. The remaining subfamilies, such as I and II, contain three exons and two exons (e.g., FtPYL19), respectively. Nineteen FtPYL genes were evenly distributed across the eight chromosomes, with at least one FtPYL gene on each chromosome. In the FtPYL gene family, there was one tandem repeat event and five gene duplication events. We investigated the gene expression levels of FtPYL gene under four abiotic stresses and different stages of grain development. Under drought stress (PEG6000), the relative expression levels of FtPYL14 and FtPYL15 increased by fourfold. Under high temperature stress (38℃), the relative expression level of FtPYL16 dropped to 0.12, and that of FtPYL17 fell to 0.22. At different stages of grain development, the gene expression level of FtPY15 is extremely high at 19 D. The relative expression level of FtPYL7 in roots and stems reaches up to approximately 450, and the relative expression level of FtPYL10 in 13 D also reaches up to 248. In this study, the PYL gene family of Tartary buckwheat was identified and analyzed based on the whole genome, and 19 paralogous form FtPYL genes of Tartary buckwheat were bioinformatically analyzed. The expression patterns of 19 paralogous form FtPYL genes in Tartary buckwheat cultivars under different stress treatments and during grain development were analyzed. It was found that the FtPYL gene played an important role in grain development.