FERMT2

FERMT2
  • 文章类型: Preprint
    背景Kindlin-2,一种衔接蛋白,在各种人类癌症中失调,包括三阴性乳腺癌(TNBC),它通过影响几种癌症标志来驱动肿瘤进展和转移。Kindlin-2的一个公认的作用涉及整合素信号的调节,通过直接结合整合素β亚基的细胞质尾部来实现。在这项研究中,我们对Kindlin-2参与稳定β1-整合素:TGF-β1型受体(TβRI)复合物的新见解,充当连接β1-整合素和TβRI的物理桥梁。Kindlin-2的丢失导致这种蛋白质复合物的降解,导致下游致癌途径的抑制。方法我们的方法包括不同范围的体外测定,包括CRISPR/Cas9基因编辑,细胞迁移,3D肿瘤球形成和侵袭,固体结合,免疫共沉淀,细胞粘附和铺展试验,以及蛋白质印迹和流式细胞术分析,利用MDA-MB-231和4T1TNBC细胞系。此外,TNBC肿瘤进展和转移的临床前体内小鼠模型被用来证实我们的发现。结果研究表明,Kindlin-2与β1-整合素之间的直接相互作用是通过Kindlin-2的C端F3结构域介导的,而Kindlin-2与TβRI之间的相互作用是通过Kindlin-2的F2结构域促进的。这座桥的中断,通过CRISPR/Cas9介导的Kindlin-2基因敲除,导致β1-整合素和TβRI的降解,导致两种蛋白质下游的致癌途径受到抑制,随后阻碍肿瘤的生长和转移。用蛋白酶体抑制剂MG-132处理Kindlin-2缺陷细胞恢复了β1-整合素和TβRI的表达。此外,Kindlin-2表达的挽救在体外和体内恢复了它们的致癌活性。结论本研究鉴定了Kindlin-2在稳定β1-整合素:TβR1复合物和调节其下游致癌信号传导中的新功能。这些发现的转化意义是巨大的,可能揭示对TNBC肿瘤治疗至关重要的新的治疗靶向途径。
    UNASSIGNED: Kindlin-2, an adaptor protein, is dysregulated in various human cancers, including triple negative breast cancer (TNBC), where it drives tumor progression and metastasis by influencing several cancer hallmarks. One well-established role of Kindlin-2 involves the regulation of integrin signaling, achieved by directly binding to the cytoplasmic tail of the integrin β subunit. In this study, we present novel insights into Kindlin-2\'s involvement in stabilizing the β1-Integrin:TGF-β type 1 receptor (TβRI) complexes, acting as a physical bridge that links β1-Integrin to TβRI. The loss of Kindlin-2 results in the degradation of this protein complex, leading to the inhibition of downstream oncogenic pathways.
    UNASSIGNED: Our methodology encompassed a diverse range of in vitro assays, including CRISPR/Cas9 gene editing, cell migration, 3D tumorsphere formation and invasion, solid binding, co-immunoprecipitation, cell adhesion and spreading assays, as well as western blot and flow cytometry analyses, utilizing MDA-MB-231 and 4T1 TNBC cell lines. Additionally, preclinical in vivo mouse models of TNBC tumor progression and metastasis were employed to substantiate our findings.
    UNASSIGNED: The investigation revealed that the direct interaction between Kindlin-2 and β1-Integrin is mediated through the C-terminal F3 domain of Kindlin-2, while the interaction between Kindlin-2 and TβRI is facilitated through the F2 domain of Kindlin-2. Disruption of this bridge, achieved via CRISPR/Cas9-mediated knockout of Kindlin-2, led to the degradation of β1-Integrin and TβRI, resulting in the inhibition of oncogenic pathways downstream of both proteins, subsequently hindering tumor growth and metastasis. Treatment of Kindlin-2-deficient cells with the proteasome inhibitor MG-132 restored the expression of both β1-Integrin and TβRI. Furthermore, the rescue of Kindlin-2 expression reinstated their oncogenic activities both in vitro and in vivo.
    UNASSIGNED: This study identifies a novel function of Kindlin-2 in stabilizing the β1-Integrin:TβR1 complexes and regulating their downstream oncogenic signaling. The translational implications of these findings are substantial, potentially unveiling new therapeutically targeted pathways crucial for the treatment of TNBC tumors.
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  • 文章类型: Journal Article
    目的:小肠神经内分泌肿瘤(SI-NET)是一种罕见的疾病,其发病率在过去的40年中有所增加。了解SI-NET潜在的遗传风险因素有助于疾病预防,并可能为诊断提供临床有益的标志物。这里,我们报告了迄今为止对SI-NETs进行的最大规模的全基因组关联研究(GWAS)的结果,该研究涉及405例病例和614,666例对照.
    方法:我们在FinnGen研究中使用了307名SI-NET患者和287,137名对照的样本来鉴定SI-NET风险相关的遗传变异。我们还使用UKBiobank的汇总统计数据(n=98SI-NET病例,n=327,529个对照)对结果进行了分析。
    结果:我们确定了6个与SI-NET风险相关的全基因组显著(p<5x10-8)基因座,其中4个(靠近SEMA6A,LGR5,CDKAL1和FERMT2)是新颖的,并且2(在LTA4H-ELK附近和KIF16B中)已被报道。有趣的是,最高命中(rs200138614,p=1.80x10-19)是一个错误的变体(p。Cys712Phe)在LGR5基因中,成人肠道干细胞的真正标记和经典WNT信号的增效剂。该关联在芬兰独立收集的70名SI-NET患者中得到验证,以及英国生物样本库外显子组序列数据(n=92例,n=392,814例对照)。肠类器官中LGR5p.Cys712Phe的过表达消除了R-Spondin1支持类器官生长的能力,表明突变扰乱了R-Spondin-LGR5信号传导。
    结论:我们的研究是迄今为止针对SI-NET的最大的GWAS研究,并报告了4个新的相关GWAS基因座,包括LGR5中的一个新的错义突变(rs200138614,p.Cys712Phe),LGR5是成人肠干细胞的规范标记。
    Small intestinal neuroendocrine tumor (SI-NET) is a rare disease, but its incidence has increased over the past 4 decades. Understanding the genetic risk factors underlying SI-NETs can help in disease prevention and may provide clinically beneficial markers for diagnosis. Here the results of the largest genome-wide association study of SI-NETs performed to date with 405 cases and 614,666 controls are reported.
    Samples from 307 patients with SI-NETs and 287,137 controls in the FinnGen study were used for the identification of SI-NET risk-associated genetic variants. The results were also meta-analyzed with summary statistics from the UK Biobank (n = 98 patients with SI-NET and n = 327,529 controls).
    We identified 6 genome-wide significant (P < 5 × 10-8) loci associated with SI-NET risk, of which 4 (near SEMA6A, LGR5, CDKAL1, and FERMT2) are novel and 2 (near LTA4H-ELK and in KIF16B) have been reported previously. Interestingly, the top hit (rs200138614; P = 1.80 × 10-19) was a missense variant (p.Cys712Phe) in the LGR5 gene, a bona-fide marker of adult intestinal stem cells and a potentiator of canonical WNT signaling. The association was validated in an independent Finnish collection of 70 patients with SI-NETs, as well as in the UK Biobank exome sequence data (n = 92 cases and n = 392,814 controls). Overexpression of LGR5 p.Cys712Phe in intestinal organoids abolished the ability of R-Spondin1 to support organoid growth, indicating that the mutation perturbed R-Spondin-LGR5 signaling.
    Our study is the largest genome-wide association study to date on SI-NETs and reported 4 new associated genome-wide association study loci, including a novel missense mutation (rs200138614, p.Cys712Phe) in LGR5, a canonical marker of adult intestinal stem cells.
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  • 文章类型: Journal Article
    目的:FERMT2上调与恶性肿瘤行为有关,包括上皮-间质(EMT)。本研究旨在表征FERMT2在口腔鳞状细胞癌(OSCC)中的表达谱,并探讨其在口腔癌相关成纤维细胞(OCAFs)塑造的肿瘤微环境中的作用。
    方法:检索以前的bulk-seq(TCGA-HNSC)和单细胞RNA-seq数据集用于生物信息学分析。人类OSCC细胞系SCC15和CAL27,原代正常口腔成纤维细胞(NOFs),OCAFs,和THP-1细胞用于介绍研究。
    结果:FERMT2在CAFs中的表达明显高于OSCC肿瘤细胞和正常成纤维细胞。较高的FERMT2表达可能独立预测OSCC患者的不良疾病特异性生存率(DSS)。敲除FERMT2抑制IGFBP7、SPARC的表达和分泌,OCAFs中的TIMP3、COL4A1和IGFBP4。FERMT2敲低的OCAFs诱导OSCC细胞侵袭和间充质标志物表达的能力明显减弱。FERMT2敲低损害了OCAFs对M0巨噬细胞迁移和M2巨噬细胞标记物表达的诱导作用。
    结论:FERMT2可以调节IGFBP7,SPARC的产生和分泌,OCAF中的COL4A1和IGFBP4,从而诱导OSCC和M2巨噬细胞极化的EMT。
    FERMT2 upregulation was associated with malignant tumor behaviors, including epithelial-to-mesenchymal (EMT). This study aimed to characterize the expression profile of FERMT2 in oral squamous cell carcinoma (OSCC) and to explore its involvement in the tumor microenvironment sculptured by oral cancer-associated fibroblasts (OCAFs).
    Previous bulk-seq (TCGA-HNSC) and single-cell RNA-seq data sets were retrieved for bioinformatic analysis. Human OSCC lines SCC15 and CAL27, primary normal oral fibroblasts (NOFs), OCAFs, and THP-1 cells were used for intro studies.
    FERMT2 expression was significantly higher in CAFs compared with OSCC tumor cells and normal fibroblasts. Higher FERMT2 expression might independently predict unfavorable disease-specific survival (DSS) in patients with OSCC. Knockdown of FERMT2 suppressed the expression and secretion of IGFBP7, SPARC, TIMP3, COL4A1, and IGFBP4 in OCAFs. OCAFs with FERMT2 knockdown had significantly weakened capability to induce the invasion of OSCC cells and the expression of mesenchymal markers. FERMT2 knockdown impaired the inducing effect of OCAFs on the migration of M0 macrophages and the expression of M2 macrophage markers.
    FERMT2 could modulate the production and secretion of IGFBP7, SPARC, COL4A1, and IGFBP4 in OCAFs, thereby inducing the EMT of OSCC and M2 macrophage polarization.
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  • 文章类型: Journal Article
    OBJECTIVE: This study aimed to explore the relationship between 18 single nucleotide polymorphisms (SNPs) and Alzheimer\'s disease (AD) within the southern Chinese population.
    METHODS: A total of 420 participants, consisting of 215 AD patients and 205 sex- and age-matched controls, were recruited. The SNaPshot technique and polymer chain reaction (PCR) were used to detect the 18 SNPs. Combined with the apolipoprotein E (APOE) ε4 allele and age at onset, we performed an association analysis between these SNPs and AD susceptibility. Furthermore, we analyzed SNP-associated gene expression using the expression quantitative trait loci analysis.
    RESULTS: Our study found that rs17125924 of FERMT2 was associated with the risk of developing AD in the dominant (P = 0.022, odds ratio [OR] = 1.57, 95% confidence interval [CI]: 1.07-2.32) and overdominant (P = 0.005, OR = 1.76, 95% CI: 1.18-2.61) models. Moreover, compared with APOE ε4 non-carriers, the frequency of the G-allele at rs17125924 was significantly higher among AD patients in APOE ε4 allele carriers (P = 0.029). The rs9271058 of HLA-DRB1 (dominant, overdominant, and additive models), rs9473117 of CD2AP (dominant and additive models), and rs73223431 of PTK2B (dominant, overdominant, and additive models) were associated with early onset AD (EOAD). Using the genotype-tissue expression (GTEx) and Braineac database, we found a significant association between rs9271058 genotypes and HLA-DRB1 expression levels, while the CC genotype at rs9473117 and the TT genotype of rs73223431 increased CD2AP and PTK2B gene expression, respectively.
    CONCLUSIONS: Our study identifies the G-allele at rs17125924 as a risk factor for developing AD, especially in APOE ε4 carriers. In addition, we found that rs9271058 of HLA-DRB1, rs9473117 of CD2AP, and rs73223431 of PTK2B were associated with EOAD. Further studies with larger sample sizes are needed to confirm our results.
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  • 文章类型: Journal Article
    Modulators of mRNA stability are not well understood in melanoma, an aggressive tumor with complex changes in the transcriptome. Here we report the ability of p62/SQSTM1 to extend mRNA half-life of a spectrum of pro-metastatic factors. These include FERMT2 and other transcripts with no previous links to melanoma. Transcriptomic, proteomic, and interactomic analyses, combined with validation in clinical biopsies and mouse models, identified a selected set of RNA-binding proteins (RBPs) recruited by p62, with IGF2BP1 as a key partner. This p62-RBP interaction distinguishes melanoma from other tumors where p62 controls autophagy or oxidative stress. The relevance of these data is emphasized by follow-up analyses of patient prognosis revealing p62 and FERMT2 as adverse determinants of disease-free survival.
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  • 文章类型: Journal Article
    Integrins are transmembrane receptors that mediate cell-extracellular matrix (ECM) and cell-cell adhesion and trophoblast cells undergo changes in integrin expression as they differentiate. However, the mechanism(s) of integrin activation leading to integrin-mediated signaling in trophoblast cell differentiation is unknown. The Fermitin family proteins are integrin activators that help mediate integrin-mediated signaling, but have never been studied in detail within the human placenta. Thus, we examined the spatiotemporal pattern of expression of Fermitin family homolog-2 (FERMT2) in human chorionic villi throughout gestation and its role in trophoblast-substrate adhesion and invasion.
    Placental villous tissue was obtained from patients undergoing elective terminations by dilatation and curettage at weeks 8-12 (n = 10), weeks 13-14 (n = 8), as well as from term deliveries at weeks 37-40 (n = 6). Tissues were fixed, processed and sections utilized for immunofluorescence analysis of FERMT2 expression during gestation. Additionally, HTR8-SVneo human trophoblast cells were transfected by electroporation with FERMT2-specific siRNAs or non-targeting siRNAs (control) and used in cell-substrate adhesion as well as invasion assays.
    FERMT2 was more commonly expressed in the basal domain of villous cytotrophoblast cells and prominently localized around the periphery of individual extravillous trophoblast cells. siRNA-mediated knockdown of FERMT2 in HTR8-SVneo cells resulted in significantly decreased trophoblast-substrate attachment (p < 0.05) as well as significantly decreased trophoblast invasion (p < 0.05) relative to control cells.
    The detection of FERMT2 throughout extravillous trophoblast columns and the results of invasion assays demonstrated that this protein is likely an important regulator of integrin activation in extravillous cells to modulate migration and invasion.
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  • 文章类型: Journal Article
    Kindlins and talins are integrin-binding proteins that are critically involved in integrin activation, an essential process for many fundamental cellular activities including cell-matrix adhesion, migration, and proliferation. As FERM-domain-containing proteins, talins and kindlins, respectively, bind different regions of β-integrin cytoplasmic tails. However, compared with the extensively studied talin, little is known about how kindlins specifically interact with integrins and synergistically enhance their activation by talins. Here, we determined crystal structures of kindlin2 in the apo-form and the β1- and β3-integrin bound forms. The apo-structure shows an overall architecture distinct from talins. The complex structures reveal a unique integrin recognition mode of kindlins, which combines two binding motifs to provide specificity that is essential for integrin activation and signaling. Strikingly, our structures uncover an unexpected dimer formation of kindlins. Interrupting dimer formation impairs kindlin-mediated integrin activation. Collectively, the structural, biochemical, and cellular results provide mechanistic explanations that account for the effects of kindlins on integrin activation as well as for how kindlin mutations found in patients with Kindler syndrome and leukocyte-adhesion deficiency may impact integrin-mediated processes.
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  • 文章类型: Journal Article
    胰腺星状细胞(PSC)在与胰腺导管腺癌(PDAC)相关的胰腺纤维化中起关键作用。Kindlin-2是调节整合素活化的粘着斑蛋白。本研究旨在阐明kindlin-2在胰腺癌PSC中的作用。通过免疫组织化学染色检查了79例切除的胰腺癌组织中的Kindlin-2表达。使用小干扰RNA建立Kindlin-2敲低永生化的人PSC。胰腺癌细胞用PSC的条件培养基处理,并检查了细胞增殖和迁移。将SUIT-2胰腺癌细胞单独或与PSC一起皮下注射到裸小鼠中,并监测肿瘤的大小。在PDAC和肿瘤周围基质中观察到Kindlin-2表达。R0切除后基质kindlin-2表达与较短的无复发生存时间相关。kindlin-2的击倒导致增殖减少,迁移,和PSC中的细胞因子表达。PSC诱导的胰腺癌细胞增殖和迁移被PSCkindlin-2敲低抑制。在体内,PSC的共同注射增加了肿瘤的大小,但是这种效应被PSC中的kindlin-2敲低所消除。总之,PSC中的kindlin-2促进胰腺癌的进展。
    Pancreatic stellate cells (PSCs) play a pivotal role in pancreatic fibrosis associated with pancreatic ductal adenocarcinoma (PDAC). Kindlin-2 is a focal adhesion protein that regulates the activation of integrins. This study aimed to clarify the role of kindlin-2 in PSCs in pancreatic cancer. Kindlin-2 expression in 79 resected pancreatic cancer tissues was examined by immunohistochemical staining. Kindlin-2-knockdown immortalized human PSCs were established using small interfering RNA. Pancreatic cancer cells were treated with conditioned media of PSCs, and the cell proliferation and migration were examined. SUIT-2 pancreatic cancer cells were subcutaneously injected into nude mice alone or with PSCs and the size of the tumors was monitored. Kindlin-2 expression was observed in PDAC and the peritumoral stroma. Stromal kindlin-2 expression was associated with shorter recurrence-free survival time after R0 resection. Knockdown of kindlin-2 resulted in decreased proliferation, migration, and cytokine expression in PSCs. The PSC-induced proliferation and migration of pancreatic cancer cells were suppressed by kindlin-2 knockdown in PSCs. In vivo, co-injection of PSCs increased the size of the tumors, but this effect was abolished by kindlin-2 knockdown in PSCs. In conclusion, kindlin-2 in PSCs promoted the progression of pancreatic cancer.
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  • 文章类型: Journal Article
    最近对高加索人群的全基因组关联研究(GWAS)的荟萃分析确定了FERMT2基因中的单核苷酸多态性(SNP)rs17125944是迟发性阿尔茨海默病(LOAD)的新易感位点。为了验证rs17125944多态性与北方汉族LOAD风险的相关性,我们纳入了2338名中国汉族受试者(984例和1354名年龄和性别匹配的对照)的病例对照研究.我们的结果表明,rs17125944多态性与LOAD之间没有显着关联(基因型:P=0.953;等位基因:P=0.975)。此外,通过载脂蛋白E(APOE)ε4和多变量逻辑回归分析分层后,等位基因和基因型分布没有显着差异。我们还对81908名个体进行了荟萃分析。Meta分析显示,C等位基因是高加索人群(OR=1.15,95%CI=1.10-1.20)和合并人群(OR=1.13,95%CI=1.08-1.19)中LOAD的危险因素。而在中国人口中,C等位基因与LOAD风险增加无关(OR=1.07,95%CI=0.89-1.28)。总之,我们的研究表明,在中国北方汉族人群中,FERMT2基因的rs17125944多态性可能与LOAD无关。
    A recent meta-analysis of genome-wide association studies (GWAS) in population of Caucasian identified a single nucleotide polymorphism (SNP) rs17125944 in the FERMT2 gene as a new susceptibility locus for late-onset Alzheimer\'s disease (LOAD). In order to validate the association of the rs17125944 polymorphism with LOAD risk in the northern Han Chinese, we recruited a case-control study of 2338 Han Chinese subjects (984 cases and 1354 age- and gender-matched controls). Our results demonstrated that there was no significant association between the rs17125944 polymorphism and LOAD (genotype: P = 0.953; allele: P = 0.975). Furthermore, no significant differences were observed in alleles and genotypes distribution after stratification by apolipoprotein E (APOE) ε4 and multivariate logistic regression analysis. We also performed a meta-analysis in 81908 individuals. The meta-analysis showed that the C allele is the risk factor for LOAD in Caucasian group (OR = 1.15, 95 % CI = 1.10-1.20) and combined population (OR = 1.13, 95 % CI = 1.08-1.19). While in Chinese population, the C allele is not associated with increased risk of LOAD (OR = 1.07, 95 % CI = 0.89-1.28). In conclusion, our study showed that the rs17125944 polymorphism in FERMT2 gene might not be association with LOAD in northern Han Chinese population.
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  • 文章类型: Journal Article
    背景:越来越多的证据表明,微小RNA(miRNA)与阿尔茨海默病(AD)有关,并且一些疾病相关的遗传变异位于miRNA结合位点内。在本研究中,我们试图表征早期全基因组关联研究(GWAS)中定义的基因座内miRNA靶位点的功能多态性.这项研究的主要目的是(1)促进鉴定负责感兴趣基因座内GWAS信号的基因或基因,以及(2)确定功能多态性如何参与AD过程(例如,通过影响miRNA介导的基因表达变异)。
    方法:开发了严格的计算机分析,以选择对miRNA介导的抑制受损敏感的潜在多态性,和随后的功能测定在HeLa和HEK293细胞中进行。
    结果:在体外鉴定并进一步分析了两种多态性。与miR-4504共转染的AD相关rs7143400-T等位基因(位于FERMT2的3'非翻译区[3'-UTR])导致相对于与相同miRNA共转染的rs7143400-G等位基因更低的蛋白质水平。NUP160的3'-UTR中的AD相关rs9909-C等位基因消除了rs9909-G等位基因中观察到的miR-1185-1-3p调节的表达。
    结论:当与先前的关联研究结果结合考虑时,我们的结果表明,FERMT2的表达降低可能是AD病因的危险因素,而NUP160的表达增加可能对疾病有保护作用。因此,我们的数据通过突出显示两种推定参与疾病过程的新蛋白质,为AD提供了新的见解。
    BACKGROUND: A growing body of evidence suggests that microRNAs (miRNAs) are involved in Alzheimer\'s disease (AD) and that some disease-associated genetic variants are located within miRNA binding sites. In the present study, we sought to characterize functional polymorphisms in miRNA target sites within the loci defined in earlier genome-wide association studies (GWAS). The main objectives of this study were to (1) facilitate the identification of the gene or genes responsible for the GWAS signal within a locus of interest and (2) determine how functional polymorphisms might be involved in the AD process (e.g., by affecting miRNA-mediated variations in gene expression).
    METHODS: Stringent in silico analyses were developed to select potential polymorphisms susceptible to impairment of miRNA-mediated repression, and subsequent functional assays were performed in HeLa and HEK293 cells.
    RESULTS: Two polymorphisms were identified and further analyzed in vitro. The AD-associated rs7143400-T allele (located in 3\' untranslated region [3\'-UTR] of FERMT2) cotransfected with miR-4504 resulted in lower protein levels relative to the rs7143400-G allele cotransfected with the same miRNA. The AD-associated rs9909-C allele in the 3\'-UTR of NUP160 abolished the miR-1185-1-3p-regulated expression observed for the rs9909-G allele.
    CONCLUSIONS: When considered in conjunction with the findings of previous association studies, our results suggest that decreased expression of FERMT2 might be a risk factor in the etiopathology of AD, whereas increased expression of NUP160 might protect against the disease. Our data therefore provide new insights into AD by highlighting two new proteins putatively involved in the disease process.
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