Enterovirus G

肠道病毒 G
  • 文章类型: Journal Article
    肠道病毒G(EV-G)属于Picornaviridae家族,在全世界范围内感染猪种群。已经鉴定了总共20种EV-G基因型(EV-G1至EV-G20)。在这项研究中,我们分离并鉴定了EV-G菌株,名为EV-G/YN29/2022,来自腹泻猪的粪便。这是中国分离出的第一株EV-G6毒株。全基因组核苷酸和相应氨基酸序列的比较表明,该分离株与EV-G6基因型的关系比其他基因型更密切,全基因组序列相似性从83.7%(Iba46442)到84.4%(PEV-B-KOR),相应的氨基酸同源性范围从96%(Iba46442)到96.8%(PEV-B-KOR)。同样,EV-G/YN29/2022的VP1基因和相应氨基酸序列与EV-G6基因型高度相似(>82.9%和>94.3%,分别)。因此,分离的菌株被分类为EV-G6基因型。这是中国分离出的第一株EV-G6毒株。致病性分析显示,EV-G/YN29/2022感染导致轻度腹泻,典型的皮肤损伤,和减轻体重。该菌株主要分布在肠组织中,但也在大脑中发现,肠系膜淋巴结,脾,脾还有肝脏.我们的结果可以作为进一步阐明流行病学的参考,进化,EV-G的致病性
    Enterovirus G (EV-G) belongs to the Picornaviridae family and infects porcine populations worldwide. A total of 20 EV-G genotypes (EV-G1 to EV-G20) have been identified. In this study, we isolated and characterized an EV-G strain, named EV-G/YN29/2022, from the feces of diarrheic pigs. This was the first EV-G6 strain isolated in China. Comparison of the whole genome nucleotide and corresponding amino acid sequences showed that the isolate was more closely related to those of the EV-G6 genotype than other genotypes, with the complete genome sequence similarity ranging from 83.7% (Iba46442) to 84.4% (PEV-B-KOR), and corresponding amino acid homology ranged from 96% (Iba46442) to 96.8% (PEV-B-KOR). Similarly, the VP1 gene and corresponding amino acid sequences of EV-G/YN29/2022 were highly similar to those of the EV-G6 genotype (>82.9% and >94.3%, respectively). Thus, the isolated strain was classified as EV-G6 genotype. This was the first EV-G6 strain isolated in China. Pathogenicity analyses revealed that EV-G/YN29/2022 infection caused mild diarrhea, typical skin lesions, and weight reduction. The strain was mainly distributed to the intestinal tissue but was also found in the brain, mesenteric lymph nodes, spleen, and liver. Our results can be used as a reference to further elucidate the epidemiology, evolution, and pathogenicity of EV-G.
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  • 文章类型: Journal Article
    肠道病毒G(EV-G)最近已被证明会影响仔猪的体重增加并引起神经系统症状。然而,EV-G的血清学研究是有限的。在这项研究中,我们开发了一种新的基于结构蛋白的血清学检测方法,EV-G的VP1测定内和测定间系数变化分别为3.2~8.9%和2.6~8.0%,分别。基于VP1的酶联免疫吸附测定(ELISA)与针对其他已知猪病毒的抗血清没有交叉反应。此外,与其他方法进行了比较,包括基于VP2和VP3蛋白的间接ELISA和蛋白质印迹(WB)分析,这证明了新方法的可靠性。使用基于VP1的ELISA,我们对2019-2021年广西不同猪场采集的1,041份血清样本进行了首次EV-G血清流行病学调查。结果显示68.78%的血清样本和100%的猪场均为EV-G阳性,在不同年龄的猪中血清阳性发生率相对较高。这在育肥猪和母猪中尤为明显,这可能表明仔猪在生长过程中经历了EV-G的感染。我们的数据提供了中国猪EV-G感染的第一个血清学证据,并揭示了EV-G感染在广西的广泛存在,中国。
    Enterovirus G (EV-G) has recently been shown to affect weight gain and cause neurological symptoms in piglets. However, the serological investigation of EV-G is limited. In this study, we developed a novel serological detection method based on the structural protein, VP1 of EV-G. The intra-assay and inter-assay coefficient variations were 3.2-8.9% and 2.6-8.0%, respectively. There was no cross-reaction of the VP1-based enzyme-linked immunosorbent assay (ELISA) with antisera against the other known porcine viruses. In addition, a comparison was made with other methods including the developed indirect ELISAs based on VP2 and VP3 proteins and western blot (WB) analysis, which demonstrated the reliability of the novel method. Using the VP1-based ELISA, we carried out the first seroepidemiological survey of EV-G in China by testing 1041 serum samples collected from different pig farms in Guangxi from 2019 to 2021. Our results showed that 68.78% of the serum samples and 100% of the pig farms were positive for EV-G, with a relatively high incidence of seropositivity in pigs of different ages. This was specifically evident in fattening pigs and sows, which may suggest that the piglets have experienced an infection with EV-G during their growth process. Our data provide the first serological evidence of EV-G infections in pigs from China and reveal the widespread presence of EV-G infections in Guangxi, China.
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  • 文章类型: Journal Article
    当前的研究报告了对流行病学的深入分析,危险因素,和从印度猪分离的肠道病毒G(EV-G)的完整基因组的分子特征。我们分析了从印度各省收集的EV-G分离株的几个基因,使用系统发育分析,重组检测,SimPlot,和选择压力分析。我们对534份猪粪便样本的分析表明,11.61%(62/534)的样本对EV-G呈阳性。虽然G6基因型是最主要的,我们的研究结果表明,印度EV-G菌株也聚集有G1,G6,G8和G9型EV-G.此外,印度EV-G菌株与越南(81.3%)和中国EV-G分离株(80.3%)的核苷酸相似性最高。此外,我们从日本分离株和韩国分离株中鉴定出一株重组的印度EV-G株.总之,我们的发现为流行病学提供了重要的见解,遗传多样性,以及EV-G在印度的发展。
    The current study reports the in-depth analysis of the epidemiology, risk factors, and molecular characterization of a complete genome of Enterovirus G (EV-G) isolated from Indian pigs. We analysed several genes of EV-G isolates collected from various provinces in India, using phylogenetic analysis, recombination detection, SimPlot, and selection pressure analyses. Our analysis of 534 porcine faecal samples revealed that 11.61% (62/534) of the samples were positive for EV-G. While the G6 genotype was the most predominant, our findings showed that Indian EV-G strains also clustered with EV-G types G1, G6, G8, and G9. Furthermore, Indian EV-G strains exhibited the highest nucleotide similarity with Vietnamese (81.3%) and Chinese EV-G isolates (80.3%). Moreover, we identified a recombinant Indian EV-G strain with a putative origin from a Japanese isolate and South Korean EV-G isolate. In summary, our findings provide significant insights into the epidemiology, genetic diversity, and evolution of EV-G in India.
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  • 文章类型: Journal Article
    从腹泻仔猪中分离出4株肠道病毒G(EV-G)株,对普通猪肠道病毒呈阴性。通过使用噬斑纯化的肠道病毒,在透射电子显微镜下观察到直径约为30nm的球形肠道病毒颗粒。完整的基因组序列分析显示,四种肠道病毒中的每一种在病毒基因组的2C和3A连接区之间都含有木瓜蛋白酶样半胱氨酸蛋白酶(PLCP)基因。该插入编码与猪圆环病毒的PLCP相似的预测蛋白酶。基于具有和不具有PLCP基因的完整基因组的系统发育分析表明,四个分离的EV-G菌株与全球肠道病毒G1-PLCP菌株一起分组。与先前在中国检测到的EV-G/PLCP菌株密切相关,Japan,和韩国(基于核苷酸的相似性为90.3%-92.2%)。细胞敏感性测试表明,分离的EV-G可以感染并在各种宿主物种的细胞系中复制。此外,致病性评价显示,分离的EV-Gs诱发轻度腹泻,发热,和减少感染仔猪的体重。流行病学调查显示,猪群中EV-G的患病率很高。一起,我们的发现表明,分离的EV-G在仔猪中具有致病性,并且可能有利于提供有关EV-G的进化和病理特性的更可靠的数据。重要性肠道病毒G是一种与几种哺乳动物疾病相关的正义单链RNA病毒。本文分离的猪肠道病毒株是具有猪圆环病毒PLCP基因的嵌合病毒,与全球EV-G1株一起分组。分离的EV-G菌株可以感染来自不同物种的各种细胞类型,提示其潜在的跨物种感染风险。动物实验表明分离的EV-G对仔猪的致病能力。此外,EV-Gs在猪群中广泛分布。我们的研究结果表明,EV-G可能已经进化出一种新的广泛取向机制,这对疾病的控制和预防具有重要意义。
    OBJECTIVE: Enterovirus G is a species of positive-sense single-stranded RNA viruses associated with several mammalian diseases. The porcine enterovirus strains isolated here were chimeric viruses with the PLCP gene of porcine torovirus, which grouped together with global EV-G1 strains. The isolated EV-G strain could infect various cell types from different species, suggesting its potential cross-species infection risk. Animal experiment showed the pathogenic ability of the isolated EV-G to piglets. Additionally, the EV-Gs were widely distributed in the swine herds. Our findings suggest that EV-G may have evolved a novel mechanism for broad tropism, which has important implications for disease control and prevention.
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  • 文章类型: Journal Article
    肠道病毒G(EV-G)在世界范围内的猪群中流行,共确认了20种基因型(G1至G20)。最近,已分离或检测到携带猪圆环病毒木瓜蛋白酶样半胱氨酸蛋白酶(PLCP)基因的重组EV-Gs,而其致病性却知之甚少。在这项研究中,EV-G17-PLCP菌株,\'EV-G/YN23/2022\',从腹泻猪的粪便中分离出来,病毒在许多细胞系中强劲复制。与G17菌株\'IShi-Ya4\'(LC549655)有关,该分离株显示出最高的完整基因组核苷酸(87.5%)和多蛋白氨基酸(96.6%)同一性,在EV-G/YN23/2022基因组的708和3383位检测到可能的重组事件。EV-G/YN23/2022对仔猪是非致命性的,但轻度腹泻,短暂的发热,典型的皮肤损伤,观察到体重增加减速。病毒在多个器官中有效复制,病理病变主要位于小肠。所有受攻击的仔猪在接种后(dpi)6至9天显示EV-G/YN23/2022的血清转化,中和抗体在15dpi达到峰值。IL-6、IL-18、IFN-α、IFN-β,在病毒感染期间,外周血单个核细胞(PBMC)中的ISG-15显著上调。本文是EV-G17-PLCP株在中国的分离和致病性评价的第一份文献。该结果可能会促进我们对EV-G-PLCP的演变特征和发病机制的理解。
    Enterovirus G (EV-G) is prevalent in pig populations worldwide, and a total of 20 genotypes (G1 to G20) have been confirmed. Recently, recombinant EV-Gs carrying the papain-like cysteine protease (PLCP) gene of porcine torovirus have been isolated or detected, while their pathogenicity is poorly understood. In this study, an EV-G17-PLCP strain, \'EV-G/YN23/2022\', was isolated from the feces of pigs with diarrhea, and the virus replicated robustly in numerous cell lines. The isolate showed the highest complete genome nucleotide (87.5%) and polyprotein amino acid (96.6%) identity in relation to the G17 strain \'IShi-Ya4\' (LC549655), and a possible recombination event was detected at the 708 and 3383 positions in the EV-G/YN23/2022 genome. EV-G/YN23/2022 was nonlethal to piglets, but mild diarrhea, transient fever, typical skin lesions, and weight gain deceleration were observed. The virus replicated efficiently in multiple organs, and the pathological lesions were mainly located in the small intestine. All the challenged piglets showed seroconversion for EV-G/YN23/2022 at 6 to 9 days post-inoculation (dpi), and the neutralization antibody peaked at 15 dpi. The mRNA expression levels of IL-6, IL-18, IFN-α, IFN-β, and ISG-15 in the peripheral blood mononuclear cells (PBMCs) were significantly up-regulated during viral infection. This is the first documentation of the isolation and pathogenicity evaluation of the EV-G17-PLCP strain in China. The results may advance our understanding of the evolution characteristics and pathogenesis of EV-G-PLCP.
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  • 文章类型: Journal Article
    肠道病毒G属小RNA科,与多种动物疾病相关。我们分离并鉴定了一种新的EV-G2菌株,CHN-SCMY2021,中国第一个2型分离株。CHN-SCMY2021直径约为25nm,具有小核糖核酸病毒的典型形态,其基因组为7341个核苷酸。基于VP1的序列比对和系统发育分析表明该分离物是基因型2菌株。CHN-SCMY2021与其他EV-G基因型2株的全基因组相似性为78.3%-86.4%,最大的相似性是EVG/Porcine/JPN/Iba26-506/2014/G2(LC316792.1).重组分析表明,CHN-SCMY2021是714171/CaoLanh_VN(KT265894.2)和LP54(AF363455.1)之间的重组产生的。除了ST细胞,CHN-SCMY2021具有广泛的细胞适应,对BHK-21、PK-15、IPEC-J2、LLC-PK和Vero细胞敏感。在仔猪中,CHN-SCMY2021导致轻度腹泻和肠壁变薄。该病毒主要分布在肠道组织中,但也在心脏中发现,肝脏,脾,脾肺,肾,大脑,和脊髓。CHN-SCMY2021是来自中国的第一个系统表征的EV-G基因型2株,我们的结果丰富了流行病学的信息,与EV-G相关的分子进化和致病性
    Enterovirus G belongs to the family Picornaviridae and are associated with a variety of animal diseases. We isolated and characterized a novel EV-G2 strain, CHN-SCMY2021, the first genotype 2 strain isolated in China. CHN-SCMY2021 is about 25 nm diameter with morphology typical of picornaviruses and its genome is 7341 nucleotides. Sequence alignment and phylogenetic analysis based on VP1 indicated that this isolate is a genotype 2 strain. The whole genome similarity between CHN-SCMY2021 and other EV-G genotype 2 strains is 78.3-86.4%, the greatest similarity is to EVG/Porcine/JPN/Iba26-506/2014/G2 (LC316792.1). Recombination analysis indicated that CHN-SCMY2021 resulted from recombination between 714,171/CaoLanh_VN (KT265894.2) and LP 54 (AF363455.1). Except for ST cells, CHN-SCMY2021 has a broad spectrum of cellular adaptations, which are susceptible to BHK-21, PK-15, IPEC-J2, LLC-PK and Vero cells. In piglets, CHN-SCMY2021 causes mild diarrhea and thinning of the intestinal wall. The virus was mainly distributed to intestinal tissue but was also found in heart, liver, spleen, lung, kidney, brain, and spinal cord. CHN-SCMY2021 is the first systematically characterized EV-G genotype 2 strain from China, our results enrich the information on the epidemiology, molecular evolution and pathogenicity associated with EV-G.
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  • 文章类型: Journal Article
    猪肠小核糖核酸病毒通常会导致猪腹泻和神经并发症,并对养猪造成巨大损失。本研究扩大了印度猪肠道小核糖核酸病毒的有限数据,这是早期实施控制措施和检查进一步爆发所必需的。来自北方邦的398个猪粪便样本,中央邦,对印度的恰蒂斯加尔邦和贾坎德邦进行了猪睾丸病毒(PTV)筛查,猪皂病毒(PSV)和肠道病毒G(EV-G)通过逆转录聚合酶链反应(RT-PCR)使用5'UTR特异性引物。PTV的患病率,PSV和EV-G为12.81%(51/398),5.77%(23/398)和24.37%(97/398),分别。在所有纳入的肠小核糖核酸病毒中,印度猪的EV-G在循环中相对较高。相反,同时感染一种以上的肠道小核糖核酸病毒也很常见。
    UNASSIGNED:在线版本包含补充材料,可在10.1007/s13337-022-00756-0获得。
    Porcine enteric picornaviruses often consequence diarrhoea and nervous complications in pig and pose enormous loss to pig farming. The present study expands the limited Indian data of porcine enteric picornaviruses which is needed for the early implementation of control measures and to check further outbreaks. A total of 398 porcine faecal samples from Uttar Pradesh, Madhya Pradesh, Chhattisgarh and Jharkhand state of India were screened for porcine teschovirus (PTV), porcine sapelovirus (PSV) and enterovirus G (EV-G) by reverse transcriptase-polymerase chain reaction (RT-PCR) using 5\'UTR-specific primers. The prevalence of PTV, PSV and EV-G was found to be 12.81% (51/398), 5.77% (23/398) and 24.37% (97/398), respectively. EV-G was relatively higher in circulation in Indian pigs among all the included enteric picornaviruses. Conversely, the concurrent infection of more than one enteric picornavirus was also frequent.
    UNASSIGNED: The online version contains supplementary material available at 10.1007/s13337-022-00756-0.
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  • 文章类型: Journal Article
    没有猪圆环病毒2(PCV2)或猪繁殖与呼吸综合征病毒(PRRSV)病史的商业猪场反复报道,在断奶后3至6周的时间内,大约20-30%的猪的体重增加和消瘦症状显着减少。由于标准的临床干预措施未能解决症状学,病毒宏基因组学用于描述和监测出生时的肠道病毒,3周,4周,6周,9周龄。后四个采样点是7天,3周,断奶后6周,分别。在牛群中鉴定出14种不同的肠道病毒,所有这些以前都与肠道疾病有关。在这里,我们发现浪费与猪的肠道病毒改变有关,其特征在于:(1)在3周龄时存在肠道病毒G,其次是在断奶后6周浪费猪中病毒的流行率较高;(2)3周龄的轮状病毒;(3)断奶后一周的猪萨波病毒。然而,这些数据没有提供特定病毒感染与农场断奶后临床问题之间的因果联系。一起,我们的结果提供证据表明,在断奶前和断奶后早期肠道病毒的紊乱在断奶后生长阶段肠道屏障功能障碍和营养吸收的发展中起决定性作用。此外,我们显示,健康猪和消瘦猪断奶后一周的肠道病毒载量急剧增加。这项研究也首次报道了在家猪生命的前9周内猪轮状病毒物种和猪星形病毒遗传谱系的动态和共感染。
    A commercial pig farm with no history of porcine circovirus 2 (PCV2) or porcine reproductive and respiratory syndrome virus (PRRSV) repeatedly reported a significant reduction in body weight gain and wasting symptoms in approximately 20-30% of the pigs in the period between three and six weeks after weaning. As standard clinical interventions failed to tackle symptomatology, viral metagenomics were used to describe and monitor the enteric virome at birth, 3 weeks, 4 weeks, 6 weeks, and 9 weeks of age. The latter four sampling points were 7 days, 3 weeks, and 6 weeks post weaning, respectively. Fourteen distinct enteric viruses were identified within the herd, which all have previously been linked to enteric diseases. Here we show that wasting is associated with alterations in the enteric virome of the pigs, characterized by: (1) the presence of enterovirus G at 3 weeks of age, followed by a higher prevalence of the virus in wasting pigs at 6 weeks after weaning; (2) rotaviruses at 3 weeks of age; and (3) porcine sapovirus one week after weaning. However, the data do not provide a causal link between specific viral infections and the postweaning clinical problems on the farm. Together, our results offer evidence that disturbances in the enteric virome at the preweaning stage and early after weaning have a determining role in the development of intestinal barrier dysfunctions and nutrient uptake in the postweaning growth phase. Moreover, we show that the enteric viral load sharply increases in the week after weaning in both healthy and wasting pigs. This study is also the first to report the dynamics and co-infection of porcine rotavirus species and porcine astrovirus genetic lineages during the first 9 weeks of the life of domestic pigs.
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  • 文章类型: Journal Article
    BACKGROUND: Enterovirus G (EV-G) causes subclinical infections and is occasionally associated with diarrhea in pigs. In this study, we conducted a cross-sectional survey of EV-G in pigs from 73 pig farms in 20 provinces of Thailand from December 2014 to January 2018.
    RESULTS: Our results showed a high occurrence of EV-Gs which 71.6 % of fecal and intestinal samples (556/777) and 71.2 % of pig farms (52/73) were positive for EV-G by RT-PCR specific to the 5\'UTR. EV-Gs could be detected in all age pig groups, and the percentage positivity was highest in the fattening group (89.7 %), followed by the nursery group (89.4 %). To characterize the viruses, 34 EV-G representatives were characterized by VP1 gene sequencing. Pairwise sequence comparison and phylogenetic analysis showed that Thai-EV-Gs belonged to the EV-G1, EV-G3, EV-G4, EV-G8, EV-G9 and EV-G10 genotypes, among which the EV-G3 was the predominant genotype in Thailand. Co-infection with different EV-G genotypes or with EV-Gs and porcine epidemic diarrhea virus (PEDV) or porcine deltacoronavirus (PDCoV) on the same pig farms was observed.
    CONCLUSIONS: Our results confirmed that EV-G infection is endemic in Thailand, with a high genetic diversity of different genotypes. This study constitutes the first report of the genetic characterization of EV-GS in pigs in Thailand.
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  • 文章类型: Journal Article
    肠道病毒G(EV-G)感染全球猪群,感染通常无症状,木瓜蛋白酶样半胱氨酸蛋白酶基因(PLCP)的插入增加了潜在的公共卫生威胁。然而,EV-G本身的遗传和致病特征尚未完全了解。在本研究中,一株EV-G菌株,命名为CH/17GXQZ/2017,从广西有腹泻症状的仔猪中分离纯化,中国。该菌株对Marc-145细胞产生稳定的细胞病变作用,滴度为5×106PFU/mL。用透射电子显微镜观察到直径为25-30nm的球形肠道病毒颗粒。CH/17GXQZ/2017菌株的全基因组序列由7,364个核苷酸组成,基于VP1氨基酸序列的系统发育树表明该菌株聚类为G1基因型。对7日龄仔猪口服接种CH/17GXQZ/2017菌株,评价其致病性。尽管在实验过程中没有一个被感染的仔猪死亡,观察到临床神经系统症状,表现为大脑轻度充血和Nissl体空泡化。此外,CH/17GXQZ/2017菌株的感染显著减缓了哺乳仔猪的体重增加。这项研究表明,CH/17GXQZ/2017对新生仔猪具有致病性,并提高了对其生物学特性的认识。EV-G的进化和致病性
    Enterovirus G (EV-G) infects porcine populations worldwide and the infections are generally asymptomatic, with the insertion of the papain-like cysteine protease gene (PLCP) increasing the potential public health threats. However, the genetic and pathogenic characteristics of EV-G itself are not fully understood as yet. In the present study, one EV-G strain, named CH/17GXQZ/2017, was isolated and purified from piglets with diarrheic symptoms from the Guangxi Province, China. This strain produced stable cytopathic effects on Marc-145 cells with a titer of 5 × 106 PFU/mL. The spherical enterovirus particles with diameters of 25-30 nm were observed by using transmission electron microscopy. The whole genome sequence of the CH/17GXQZ/2017 strain consists of 7,364 nucleotides, and the phylogenetic tree based on the amino acid sequences of VP1 indicated this strain was clustered to the G1 genotype. Seven-day-old piglets were inoculated orally with the CH/17GXQZ/2017 strain in order to evaluate its pathogenicity. Although none of the infected piglets died during the experiment, clinical neurological symptoms were observed manifesting as mild hyperemia and Nissl bodies vacuolization in the cerebrum. In addition, the infection with the CH/17GXQZ/2017 strain decelerated the weight gain of suckling piglets significantly. This study demonstrates that CH/17GXQZ/2017 is pathogenic to neonatal piglets and advance knowledge on the biological characteristics, evolution and pathogenicity of EV-G.
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