Echinorhynchida

  • 文章类型: Journal Article
    目的:分子系统发育学一直在改进无头鱼系统,然而,许多类群仍未开发。Yamaguti,1959年及其类型物种M.lateolabracisYamaguti,1959年是这样一个待探索的分类单元。我们的目标是完善(I)系统的位置,(ii)形态界限,和(iii)该属的分类成分。我们还旨在检查已分配给该属的物种的分类状况。
    方法:对新采集的标本以及长尾类动物的类型材料进行了形态学观察。此外,使用最大似然法和贝叶斯推断的分子系统发育分析是基于新收集的标本进行的.至少在Metarhadinorhynchus中分配过一次的标称物种,以及相关的形式,GorgorhynchuslateolabriYin和Wu,1984年,是根据文献信息进行分类重新评估的。
    结果:我们对M.lateolabracis类型材料的重新检查显示,水泥腺体的数量为六个,而不是原始描述中描述和说明的八个。在由此产生的系统发育树中,lateolabracis。Gorgorhynchoides电缆和Linderoth,1963年被发现是Metarhadinorhynchus的初级同义词。对曾经属于Metarhadinorhynchus的六个标称物种的分类学重新评估导致对IndorhynchusGolvan的通用诊断进行了修改,1969年和NeotegorhynchusLisitsyna,Xi,Orosová,巴恰克,和Oros,2022年。
    结论:Metarhadinorhynchus已被分配给Leptorhynchodae(Echinorhynchida),但是我们的研究现在将其定位在鱼科(Polymorphida)中。我们在Metarhadinorhynchus中提出了13种新的特定名称组合,在Indorhynchus中提出了3种新的组合。Metarhadinorhynchuslateolabri(Yin和Wu,1984)梳子。11月。可能是东方分枝杆菌(Wang,1966)梳子。11月。
    OBJECTIVE: Molecular phylogenetics has been improving the acanthocephalan systematics, yet numerous taxa remain unexplored. The palaeacanthocephalan Metarhadinorhynchus Yamaguti, 1959 and its type species M. lateolabracis Yamaguti, 1959 are such to-be-explored taxa. We aim to refine (i) the systematic placement, (ii) the morphological circumscription, and (iii) the taxonomic components of the genus. We also aim to examine the taxonomic status of the species that have been assigned to the genus.
    METHODS: Morphological observations on newly collected specimens as well as the type material of Metarhadinorhynchus lateolabracis were conducted. Also, molecular phylogenetic analyses with maximum-likelihood method and Bayesian inference were performed based on freshly collected specimens. Nominal species that have at least once been assigned in Metarhadinorhynchus, as well as a related form, Gorgorhynchus lateolabri Yin and Wu, 1984, are taxonomically re-evaluated based on literature information.
    RESULTS: Our re-examination of the type material of M. lateolabracis revealed that the number of cement glands is six, instead of eight as described and illustrated in the original description. In the resulting phylogenetic tree, M. lateolabracis was nested in Isthmosacanthidae. Gorgorhynchoides Cable and Linderoth, 1963 was found to be a junior synonym of Metarhadinorhynchus. Taxonomic re-evaluations of six nominal species that have once belonged in Metarhadinorhynchus led to modifications of generic diagnoses for Indorhynchus Golvan, 1969 and Neotegorhynchus Lisitsyna, Xi, Orosová, Barčák, and Oros, 2022.
    CONCLUSIONS: Metarhadinorhynchus has been assigned to Leptorhynchoididae (Echinorhynchida), but our study now locates it in Isthmosacanthidae (Polymorphida). We propose 13 new combinations of specific names in Metarhadinorhynchus and three in Indorhynchus. Metarhadinorhynchus lateolabri (Yin and Wu, 1984) comb. nov. may be synonymous with M. orientalis (Wang, 1966) comb. nov.
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  • 文章类型: Journal Article
    背景:棘头的分类,专性体内寄生虫的进化枝,由于形态特征的分辨率不够强,并且缺乏足够分辨率的分子数据,因此仍未解决。线粒体基因组可能是合适的候选者,但它们可用于少数物种,它们对这项任务的适用性尚未得到彻底测试。
    方法:这里,我们对大科的第一个有丝分裂基因组进行了测序:中华中华中华中华。这些也是为整个属产生的第一个分子数据。我们使用所有12个蛋白质编码基因的串联核苷酸(NUC)和氨基酸(AA)进行了一系列系统发育分析,三种不同的算法,和整个可用的无头有丝分裂基因组数据集。
    结果:我们在数据集中发现了强烈的成分异质性的证据,和Micracanthorhynchinadakusuiensis在所有分析中都表现出不成比例的长分支。当将NUC数据集与标准系统遗传算法结合使用时,这导致了在Echinorhynchida进化枝的基础上解决的M.dakusuiensis的长分支吸引伪像(LBA),最大似然(ML)和贝叶斯推理(BI)。AA数据集(BI-AAs和ML-AAs)和设计用于抑制LBA的CAT-GTR模型(CAT-GTR-AAs和CAT-GTR-NUC)的使用至少部分地减弱了这种LBA伪影。结果支持Illiosentidae作为棘突科和Rhadinorhynchidae的基础辐射,与棘突科和Pomporhynchidae形成进化枝。Rhadinorhynchidae及其姐妹谱系的单系问题仍未解决。在我们所有的分析中,Echinorhynchida顺序都是共生的。
    结论:未来的研究在应用有丝分裂基因组学数据解析头孢的系统发育时,应注意减少成分异质性驱动的LBA伪影。
    BACKGROUND: Classification of the Acanthocephala, a clade of obligate endoparasites, remains unresolved because of insufficiently strong resolution of morphological characters and scarcity of molecular data with a sufficient resolution. Mitochondrial genomes may be a suitable candidate, but they are available for a small number of species and their suitability for the task has not been tested thoroughly.
    METHODS: Herein, we sequenced the first mitogenome for the large family Rhadinorhynchidae: Micracanthorhynchina dakusuiensis. These are also the first molecular data generated for this entire genus. We conducted a series of phylogenetic analyses using concatenated nucleotides (NUC) and amino acids (AAs) of all 12 protein-coding genes, three different algorithms, and the entire available acanthocephalan mitogenomic dataset.
    RESULTS: We found evidence for strong compositional heterogeneity in the dataset, and Micracanthorhynchina dakusuiensis exhibited a disproportionately long branch in all analyses. This caused a long-branch attraction artefact (LBA) of M. dakusuiensis resolved at the base of the Echinorhynchida clade when the NUC dataset was used in combination with standard phylogenetic algorithms, maximum likelihood (ML) and Bayesian inference (BI). Both the use of the AA dataset (BI-AAs and ML-AAs) and the CAT-GTR model designed for suppression of LBA (CAT-GTR-AAs and CAT-GTR-NUC) at least partially attenuated this LBA artefact. The results support Illiosentidae as the basal radiation of Echinorhynchida and Rhadinorhynchidae forming a clade with Echinorhynchidae and Pomporhynchidae. The questions of the monophyly of Rhadinorhynchidae and its sister lineage remain unresolved. The order Echinorhynchida was paraphyletic in all of our analyses.
    CONCLUSIONS: Future studies should take care to attenuate compositional heterogeneity-driven LBA artefacts when applying mitogenomic data to resolve the phylogeny of Acanthocephala.
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  • 文章类型: Journal Article
    Acanthocephala门是一小组内寄生虫,存在于全球所有主要脊椎动物谱系的消化道中。在本研究中,大叶囊瘤的完整线粒体(mt)基因组(Southwell,1927年)(古刺头:Echinorhynchida)被确定和注释,首先解码了具有完整mt基因组特征的Cavisomidae家族的代表。该无头鱼的mt基因组长度为13,594bp,包含36个基因和两个非编码区。与GenBank中可用的其他无头鱼物种相比,magronum的mt基因组中trnV和SNCR(短非编码区)的位置不同。使用贝叶斯推理(BI)基于12个蛋白质编码基因的氨基酸序列进行的系统发育分析支持了古氏头孢类及其包含的Polymorphida顺序是单系的,但拒绝了棘鸟顺序的单方。我们的系统发育结果也挑战了Sphaerirostris属(Polymorphida:Centrorhynchidae)的有效性。C.magnum的新mt基因组数据对于了解该组寄生虫的进化史和建立棘头虫的自然分类非常有用。
    The phylum Acanthocephala is a small group of endoparasites occurring in the alimentary canal of all major lineages of vertebrates worldwide. In the present study, the complete mitochondrial (mt) genome of Cavisoma magnum (Southwell, 1927) (Palaeacanthocephala: Echinorhynchida) was determined and annotated, the representative of the family Cavisomidae with the characterization of the complete mt genome firstly decoded. The mt genome of this acanthocephalan is 13,594 bp in length, containing 36 genes plus two non-coding regions. The positions of trnV and SNCR (short non-coding region) in the mt genome of C. magnum are different comparing to those of the other acanthocephalan species available in GenBank. Phylogenetic analysis based on amino acid sequences of 12 protein-coding genes using Bayesian inference (BI) supported the class Palaeacanthocephala and its included order Polymorphida to be monophyletic, but rejected monophyly of the order Echinorhynchida. Our phylogenetic results also challenged the validity of the genus Sphaerirostris (Polymorphida: Centrorhynchidae). The novel mt genomic data of C. magnum are very useful for understanding the evolutionary history of this group of parasites and establishing a natural classification of Acanthocephala.
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  • 文章类型: Journal Article
    In the present study, Neorhadinorhynchus nudus (Harada, 1938) is reported from the frigate tuna Auxis thazard (Lacepéde) (Perciformes: Scombridae), in the South China Sea for the first time. The detailed morphology of N. nudus was studied using light and scanning electron microscopy based on the newly collected material. The results showed some morphometric variability between our specimens and previous studies, including the number of hooks per longitudinal row and the size of copulatory bursa and eggs. Our SEM observations also revealed all proboscis hooks emerged from elevated round rims on proboscis surface. In addition, N. nudus was firstly characterised using molecular methods by sequencing and analysing the ribosomal ITS and mitochondrial cox1 regions. There is no nucleotide divergence found in the ITS sequences, but a low level of nucleotide variability detected in the cox1 regions (the level of intraspecific nucleotide variability being 0.75% to 2.54%). The DNA sequence data obtained herein will indeed be a useful reference for rapid and accurate species identification of Neorhadinorhynchus.
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