Dose–response curves

  • 文章类型: Journal Article
    长期暴露于电离辐射的个体的剂量测定和暴露控制是重要且复杂的问题。评估可以通过评估个人适应和放射敏感性来优化,但是单个模型不可能考虑所有相关参数。我们的目标是开发用于计算长期暴露于电离辐射的人的剂量的方法,考虑到他们的放射敏感性.根据血液样本的离体辐射,建立剂量-效应模型,剂量范围为0.01-2.0和0.01-0.4Gy,使用不同的细胞遗传学标准。低剂量的“双中心染色体和环”的频率太低,没有预测价值。受试者对辐射的不同反应使得可以根据他们的辐射敏感性对他们进行分类,并为辐射敏感生成单独的剂量效应曲线,平均,和耐辐射个体,减少回顾性剂量测定中的误差。
    The dosimetry and control of exposure for individuals chronically exposed to ionizing radiation are important and complex issues. Assessment may be optimized by evaluating individual adaptation and radiosensitivity, but it is not possible for a single model to account for all relevant parameters. Our goal was to develop approaches for the calculation of doses for persons chronically exposed to ionizing radiation, taking their radiosensitivities into consideration. On the basis of ex vivo radiation of blood samples, dose-effect models were constructed for dose ranges 0.01-2.0 and 0.01-0.4 Gy, using different cytogenetic criteria. The frequencies of \"dicentric chromosomes and rings\" at low doses are too low to have predictive value. The different responses of subjects to radiation made it possible to categorize them according to their radiosensitivities and to generate separate dose-effect curves for radiosensitive, average, and radioresistant individuals, reducing the amount of error in retrospective dosimetry.
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  • 文章类型: Journal Article
    帕金森病(PD)是一种神经退行性疾病,其特征是运动协调性丧失和认知障碍。根据全球估计,到2040年,全球PD的患病率可能会超过1200万例。PD主要与遗传因素有关,在临床上,病例归因于特发性因素,如环境或职业暴露。与PD和其他神经退行性疾病相关的重金属包括铜,锰,和锌。长期接触金属会导致氧化应激升高并破坏体内平衡,导致神经元死亡。在文献中建议这些金属诱导特发性PD。这项研究测量了铜浓度在10%细胞死亡(LC10)时的致死浓度和50%细胞死亡(LC50)时的致死浓度的影响,锰,以及通过多巴胺标记在SH-SY5Y细胞上的氯化锌,活性氧(ROS)的产生,DNA损伤,暴露24小时后线粒体功能障碍。将这些测量结果与已知的神经毒素进行比较以诱导PD,100µM6-羟基多巴胺(6-ODHA)。在三种金属氯化物之间,锌与所有其他治疗的所有参数都有统计学差异,并诱导了显着的多巴胺能损失,DNA损伤,和线粒体功能障碍。在所有参数中,锰和铜的LC50与6-ODHA的响应最相似,而锰和铜的LC10反应最像未处理的细胞。这项研究表明,这些金属氯化物的反应与6-ODHA和彼此不同,这表明特发性PD利用与经典PD模型不同的机制。
    Parkinson\'s disease (PD) is a neurodegenerative condition marked by loss of motor coordination and cognitive impairment. According to global estimates, the worldwide prevalence of PD will likely exceed 12 million cases by 2040. PD is primarily associated with genetic factors, while clinically, cases are attributed to idiopathic factors such as environmental or occupational exposure. The heavy metals linked to PD and other neurodegenerative disorders include copper, manganese, and zinc. Chronic exposure to metals induces elevated oxidative stress and disrupts homeostasis, resulting in neuronal death. These metals are suggested to induce idiopathic PD in the literature. This study measures the effects of lethal concentration at 10% cell death (LC10) and lethal concentration at 50% cell death (LC50) concentrations of copper, manganese, and zinc chlorides on SH-SY5Y cells via markers for dopamine, reactive oxygen species (ROS) generation, DNA damage, and mitochondrial dysfunction after a 24 h exposure. These measurements were compared to a known neurotoxin to induce PD, 100 µM 6-hydroxydopamine (6-ODHA). Between the three metal chlorides, zinc was statistically different in all parameters from all other treatments and induced significant dopaminergic loss, DNA damage, and mitochondrial dysfunction. The LC50 of manganese and copper had the most similar response to 6-ODHA in all parameters, while LC10 of manganese and copper responded most like untreated cells. This study suggests that these metal chlorides respond differently from 6-ODHA and each other, suggesting that idiopathic PD utilizes a different mechanism from the classic PD model.
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  • 文章类型: Journal Article
    酶是重要的药物靶标,抑制酶活性是重要的治疗策略。测量催化活性的酶测定法用于发现和开发新药物。通常使用基于从底物释放4-硝基苯酚的比色测定。在典型的测定条件(pH7-9)下,4-硝基苯酚仅仅部分离子化为4-硝基苯酚盐,由于4-硝基苯酚的消光系数与4-硝基苯酚盐相比低得多,导致产物形成速率的估计不足。报告了基于405nm处的吸光度作为实验pH值的函数的4-硝基苯酚pKa值的测定。允许在测定pH下计算校正的消光系数。使用小牛肠碱性磷酸酶和4-硝基苯基磷酸酯作为底物,在pH〜8.2时,证明了使用稳态酶动力学表征抑制剂特性。确定了以下动力学参数:Km=40±3µM;Vmax=72.8±1.2µmolmin-1mg蛋白-1;kcat=9.70±0.16s-1;kcat/Km=2.44±0.16×105M-1s-1(平均值±SEM,N=4)。将原钒酸钠和EDTA用作模型抑制剂,并使用剂量反应曲线测量以下pIC50值:6.61±0.08和3.07±0.03(平均值±SEM,N=4)。快速稀释实验确定,抑制对原钒酸钠是可逆的,对EDTA是不可逆的。原钒酸盐的Ki值为51±8nM(平均值±SEM,确定N=3)。最后,对实验的数据分析和统计设计进行了讨论。
    Enzymes are important drug targets and inhibition of enzymatic activity is an important therapeutic strategy. Enzyme assays measuring catalytic activity are utilized in both the discovery and development of new drugs. Colorimetric assays based on the release of 4-nitrophenol from substrates are commonly used. 4-Nitrophenol is only partly ionized to 4-nitrophenolate under typical assay conditions (pH 7-9) leading to under-estimation of product formation rates due to the much lower extinction coefficient of 4-nitrophenol compared to 4-nitrophenolate. Determination of 4-nitrophenol pKa values based on absorbance at 405 nm as a function of experimental pH values is reported, allowing for calculation of a corrected extinction coefficient at the assay pH. Characterization of inhibitor properties using steady-state enzyme kinetics is demonstrated using calf intestine alkaline phosphatase and 4-nitrophenyl phosphate as substrate at pH ∼8.2. The following kinetic parameters were determined: Km= 40±3 µM; Vmax= 72.8±1.2 µmolmin-1mg protein-1; kcat= 9.70±0.16 s-1; kcat/Km= 2.44±0.16 × 105 M-1s-1 (mean± SEM, N = 4). Sodium orthovanadate and EDTA were used as model inhibitors and the following pIC50 values were measured using dose-response curves: 6.61±0.08 and 3.07±0.03 (mean±SEM, N = 4). Rapid dilution experiments determined that inhibition was reversible for sodium orthovanadate and irreversible for EDTA. A Ki value for orthovanadate of 51±8 nM (mean±SEM, N = 3) was determined. Finally, data analysis and statistical design of experiments are discussed.
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  • 文章类型: Journal Article
    这项研究的目的是建立东南放射医学科学研究所生物剂量测定的剂量响应曲线,以监测核电站附近当地居民的辐射暴露。对5名健康志愿者的血样进行伽马射线照射,并将每个样品均分,通过Giemsa染色和三色荧光原位杂交涂漆对三联体(染色体#1,#2和#4)进行染色体畸变分析。染色体畸变的结果在所有个体和平均数据中都遵循泊松分布,其中包括个体间辐射敏感性的变化。细胞遗传学剂量估算软件5.2版用于拟合剂量反应曲线并确定线性二次方程的系数。在基于Giemsa的双中心分析和基于FISH的易位分析中都证实了曲线拟合优度以及拟合α和β系数的统计显著性。从五个供体平均数据计算的系数在两个分析中几乎相同。我们还提供了以下结果:双中心染色体加片段的剂量反应曲线对于低剂量辐射事故后的剂量估算可能更有效。
    The purpose of this study was to establish the dose-response curves for biological dosimetry of the Dong Nam Institute of Radiological and Medical Sciences to monitor radiation exposure of local residents in the vicinity of the nuclear power plant. The blood samples of five healthy volunteers were irradiated with gamma ray, and each sample was divided equally for analysis of chromosomal aberrations by Giemsa staining and three-color fluorescence in situ hybridization painting of the triplet (chromosomes #1, #2, and #4). The results of chromosomal aberrations followed the Poisson distribution in all individual and averaged data which include inter-individual variation in radiation susceptibility. Cytogenetics Dose Estimate Software version 5.2 was used to fit the dose-response curve and to determine the coefficients of linear-quadratic equations. The goodness of fit of the curves and statistical significance of fitted α and β-coefficients were confirmed in both Giemsa-based dicentric analysis and FISH-based translocation analysis. The coefficients calculated from the five-donor average data were almost identical in both of the analyses. We also present the results that the dose-response curve for dicentric chromosomes plus fragments could be more effective for dose estimation following low-dose radiation accidents.
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  • 文章类型: Journal Article
    癌症本质上是复杂的,包含异质细胞成分和细胞外基质。过去,体外癌症研究模型已广泛用于建模和研究癌症。尽管二维(2D)细胞培养模型传统上用于癌症研究,它们有许多局限性,如细胞和细胞外环境之间的相互作用的干扰和细胞形态的变化,极性,分工机制,分化和细胞运动。此外,2D细胞模型通常是单型的。这意味着2D肿瘤模型在准确概括肿瘤细胞生长的复杂方面是无效的。以及他们的辐射反应。在过去的十年中,癌症研究人员大量采用了三维(3D)体外模型,突出了辐射对肿瘤影响研究的补充模型,尤其是与化疗结合。3D细胞培养方法的引入旨在通过将自身定位在2D细胞和动物模型之间来模拟体内组织与辐射的相互作用。从而为健康组织和肿瘤组织的辐射响应机制研究开辟了新的可能性。
    Cancer is intrinsically complex, comprising both heterogeneous cellular composition and extracellular matrix. In vitro cancer research models have been widely used in the past to model and study cancer. Although two-dimensional (2D) cell culture models have traditionally been used for cancer research, they have many limitations, such as the disturbance of interactions between cellular and extracellular environments and changes in cell morphology, polarity, division mechanism, differentiation and cell motion. Moreover, 2D cell models are usually monotypic. This implies that 2D tumor models are ineffective at accurately recapitulating complex aspects of tumor cell growth, as well as their radiation responses. Over the past decade there has been significant uptake of three-dimensional (3D) in vitro models by cancer researchers, highlighting a complementary model for studies of radiation effects on tumors, especially in conjunction with chemotherapy. The introduction of 3D cell culture approaches aims to model in vivo tissue interactions with radiation by positioning itself halfway between 2D cell and animal models, and thus opening up new possibilities in the study of radiation response mechanisms of healthy and tumor tissues.
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  • 文章类型: Journal Article
    已知环氧乙烷(EO)会引起炎症损伤,据报道,适当的体育锻炼会影响肾结石的风险。在这项研究中,我们的目的是调查EO与肾结石之间的关系,以及体育锻炼是否可能影响EO与肾结石之间的关系。总的来说,包括3336名成人参与者;其中,330人(9.9%)有自我报告的肾结石病史。数据来自2013-2016年全国健康和营养检查调查。体力活动是用代谢当量计算的,每周频率,和持续时间。使用Logistic回归和有限三次样条(RCS)曲线来探索身体活动之间的关联。EO,和肾结石。RCS的剂量反应曲线显示EO和肾结石之间呈非线性正相关。多变量逻辑回归分析显示,与最低四分位数(Q1)组相比,最高四分位数(Q4)组的参与者患肾结石风险的校正比值比(aOR)为1.548(95%置信区间1.123-2.135,P=0.008)。此外,与Q1组相比,在没有体力活动的参与者中,Q4组肾结石风险的aOR为1.326,低体力活动参与者的风险降低(aOR1.239),高体力活动者的风险增加(aOR1.981)。这项研究表明,EO是肾结石的危险因素,适当的体力活动可能在一定程度上缓和这种关系;然而,过度的体力活动会加剧这种关系。
    Ethylene oxide (EO) is known to cause inflammatory damage, and suitable physical activity can reportedly affect the risk of kidney stones. In this study, we aimed to investigate the relationship between EO and kidney stones and whether physical activity can potentially influence the relationship between EO and kidney stones. Overall, 3,336 adult participants were included; of them, 330 (9.9%) had a self-reported history of kidney stones. Data were obtained from the National Health and Nutrition Examination Survey 2013-2016. Physical activity was calculated using metabolic equivalent, weekly frequency, and duration. Logistic regression and restricted cubic spline (RCS) curves were used to explore the association between physical activity, EO, and kidney stones. Dose-response curves from the RCS showed a nonlinear positive association between EO and kidney stones. Multivariate logistic regression analysis revealed an adjusted odds ratio (aOR) of 1.548 (95% confidence interval 1.123-2.135, P = 0.008) for the risk of kidney stones among participants in the highest quartile (Q4) group compared with those in the lowest quartile (Q1) group. Furthermore, compared to the Q1 group, the aOR for risk of kidney stones in the Q4 group was 1.326 in participants without physical activity, a decreased risk (aOR 1.239) in participants with low physical activity, and an increased risk (aOR 1.981) in those with high physical activity. This study suggests that EO is a risk factor for kidney stones and that suitable physical activity may moderate this relationship to some extent; however, excessive physical activity can exacerbate this relationship.
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  • 文章类型: Journal Article
    人多能干细胞(hPSC),如诱导多能干细胞(iPSCs),对药物发现有很大的希望,毒理学研究,和再生医学。这里,我们描述了标准化方案和实验程序,这些方案和实验程序将自动化细胞培养与在小型化384孔板中的定量高通量筛选(qHTS)相结合,以实现hPSC的可扩展生产.作为原则的证明,我们建立了剂量-反应评估,并确定了常用于干细胞领域的12种小分子化合物的最佳浓度.来自不同测定的读数的多参数分析,包括细胞活力,线粒体膜电位,质膜完整性,ATP的产生被用来区分正常的生物反应和小分子处理诱导的细胞应激。总的来说,建立电池制造的集成工作流程,qHTS,高含量的成像,和数据分析为工业规模的项目提供了一个端到端的平台,并且应该利用使用hPSC衍生的细胞类型的药物发现过程。
    Human pluripotent stem cells (hPSCs), such as induced pluripotent stem cells (iPSCs), hold great promise for drug discovery, toxicology studies, and regenerative medicine. Here, we describe standardized protocols and experimental procedures that combine automated cell culture for scalable production of hPSCs with quantitative high-throughput screening (qHTS) in miniaturized 384-well plates. As a proof of principle, we established dose-response assessments and determined optimal concentrations of 12 small molecule compounds that are commonly used in the stem cell field. Multi-parametric analysis of readouts from diverse assays including cell viability, mitochondrial membrane potential, plasma membrane integrity, and ATP production was used to distinguish normal biological responses from cellular stress induced by small molecule treatment. Collectively, the establishment of integrated workflows for cell manufacturing, qHTS, high-content imaging, and data analysis provides an end-to-end platform for industrial-scale projects and should leverage the drug discovery process using hPSC-derived cell types.
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  • 文章类型: Journal Article
    Purpose: Our aim was to design a compact and cost-effective optical microscopic system for automated non-fluorescent micronucleus (MN) scoring whose performance can reach the accuracy of visual scoring with the help of minimal user interaction and also gives an option for fully automatic scoring with an accuracy suitable for triage purposes.Materials and methods: The concept of Radometer MN-Series (RS-MN) microscopic system designed by Radosys was to develop hardware and software layers in parallel in order to optimize the performance in automated MN scoring. A MN assay slide is automatically scanned by the RS-MN then the binucleated cells and micronuclei are automatically identified. Processing 1000 cells takes 10-60 minutes by automatic scoring (scanning plus image processing) depending on sample quality and required accuracy. The manual revision of the cell gallery takes an extra 10 minutes per sample. Dose response curves are determined for manual, automatic and semi-automatic scoring methods.Results: The combination of object-sensitive autofocusing method and the multi-layer image acquisition is able to reduce the minimum resolvable dose by 14%. The MN yields obtained from the manual, semi-automatic and automatic scoring methods are well correlating (Pearson\'s correlation coefficients are between 0.977 and 0.998). In order to compare the reliability of the results of visual and automatic scoring, an extended analysis on uncertainty contributors was performed. For a dose of 1 Gy, the estimated relative uncertainty from the Poisson characteristics of MN yield is 17-19% for the manual and 20-38% for the automated scoring. Other uncertainty factors (differences in donor radiosensitivity, scorer performance, and sample preparations) can contribute to this error fall within a similar range: 3-16%. Taking into account all of the possible uncertainties, the minimum resolvable dose for the manual (0.48 Gy) is the two-thirds of that of the automatic scoring (0.61 Gy).Conclusions: The results verify that the fully automatic mode of RS-MN is suitable for triage purposes. The performance of the user interacted semi-automatic mode is comparable with the reference manual scoring. Its performance reaches up to other non-fluorescent automatic systems and offers a compact and cost-effective alternative.
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  • 文章类型: Journal Article
    BACKGROUND: Diuretic responsiveness in patients with chronic heart failure (CHF) is better assessed by urine production per unit diuretic dose than by the absolute urine output or diuretic dose. Diuretic resistance arises over time when the plateau rate of sodium and water excretion is reached prior to optimal fluid elimination and may be overcome when hypertonic saline solution (HSS) is added to high doses of furosemide.
    METHODS: Forty-two consecutively hospitalized patients with refractory CHF were randomized in a 1:1:1 ratio to furosemide doses (125 mg, 250 mg, 500 mg) so that all patients received intravenous furosemide diluted in 150 ml of normal saline (0.9%) in the first step (0-24 h) and the same furosemide dose diluted in 150 ml of HSS (1.4%) in the next step (24-48 h) as to obtain 3 groups as follows: Fourteen patients receiving 125 mg (group 1), fourteen patients receiving 250 mg (group 2), and fourteen patients receiving 500 mg (group 3) of furosemide. Urine samples of all patients were collected at 30, 60, and 90 min, and 3, 4, 5, 6, 8, and 24 h after infusion. Diuresis, sodium excretion, osmolality, and furosemide concentration were evaluated for each urine sample.
    RESULTS: After randomization, 40 patients completed the study. Two patients, one in group 2 and one in group 3 dropped out. Patients in group 1 (125 mg furosemide) had a mean age of 77 ± 17 years, 43% were male, 6 (43%) had heart failure with a preserved ejection fraction (HFpEF), and 64% were in New York Heart Association (NYHA) class IV; the mean age of patients in group 2 (250 mg furosemide) was 80 ± 8.1 years, 15% were male, 5 (38%) had HFpEF, and 84% were in NYHA class IV; and the mean age of patients in group 3 (500 mg furosemide) was 73 ± 12 years, 54% were male, 6 (46%) had HFpEF, and 69% were in NYHA class IV. HSS added to furosemide increased total urine output, sodium excretion, urinary osmolality, and furosemide urine delivery in all patients and at all time points. The percentage increase was 18,14, and 14% for urine output; 29, 24, and 16% for total sodium excretion; 45, 34, and 20% for urinary osmolarity; and 27, 36, and 32% for total furosemide excretion in groups 1, 2, and 3, respectively. These findings were translated in an improvement in the furosemide dose-response curves in these patients.
    CONCLUSIONS: These results may serve as new pathophysiological basis for HSS use in the treatment of refractory CHF.
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  • 文章类型: Journal Article
    系统发育比较方法为研究性状进化提供了一套工具。然而,大多数模型固有地假设物种内的性状值是固定的。尽管有些方法可能会在物种手段周围引入错误,很少有人能够解释由环境或时间梯度驱动的变化,例如对非生物胁迫或个体发育轨迹的性状反应。这样的特征,通常被称为函数值或无限维,通常表示为反应规范,剂量-反应曲线,或时间图,并通过将独立预测变量与感兴趣的性状联系起来的数学函数来描述。这里,我介绍了一种扩展祖先状态重建的方法,以在系统发育广义最小二乘(PGLS)框架中纳入功能值特征,以及这种测试系统发育信号方法的扩展,进行方差分析(ANOVA),并使用最近提出的多变量PGLS方法测试相关性状进化。使用数据模拟将函数值比较方法的统计能力与单变量方法进行比较,并详细讨论了每个假设和挑战。
    Phylogenetic comparative methods offer a suite of tools for studying trait evolution. However, most models inherently assume fixed trait values within species. Although some methods can incorporate error around species means, few are capable of accounting for variation driven by environmental or temporal gradients, such as trait responses to abiotic stress or ontogenetic trajectories. Such traits, often referred to as function-valued or infinite-dimensional, are typically expressed as reaction norms, dose-response curves, or time plots and are described by mathematical functions linking independent predictor variables to the trait of interest. Here, I introduce a method for extending ancestral state reconstruction to incorporate function-valued traits in a phylogenetic generalized least squares (PGLS) framework, as well as extensions of this method for testing phylogenetic signal, performing phylogenetic analysis of variance (ANOVA), and testing for correlated trait evolution using recently proposed multivariate PGLS methods. Statistical power of function-valued comparative methods is compared to univariate approaches using data simulations, and the assumptions and challenges of each are discussed in detail.
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