Cytochrome b gene

细胞色素 b 基因
  • 文章类型: Journal Article
    旋毛虫病是由旋毛虫引起的人畜共患疾病,感染的主要来源是猪肉和猪肉衍生产品的消费。然而,它也可以从食用针对运动狩猎的野生动物的肉中获得。本研究的目的是:1)开发并实施一种分子方法,用于鉴定生吃香肠中的Susscrofa(猪和野猪)和Pumaconcolor(Puma)肉,这与科尔多瓦发生的旋毛虫病暴发有关,布宜诺斯艾利斯和拉潘帕省,阿根廷,分别在2010年、2021年和2022年;2)鉴定食物中存在的旋毛虫物种。设计特异性引物用于来自两种宿主物种的线粒体细胞色素b基因区域的PCR扩增和核苷酸测序。对上述疫情的样本进行了分析,以及旋毛虫的分子鉴定。还进行了幼虫。物种识别系统的结果表明,科尔多瓦和布宜诺斯艾利斯的香肠含有猪肉和美洲狮肉的混合成分,而拉潘帕的那些只含有美洲狮肉。旋毛虫与所有三个爆发有关。在这项研究中开发和实施的物种识别系统揭示了与人类病例相关的两种旋毛虫宿主物种,并发出关于人畜共患通过受感染的美洲狮肉传播给人类的风险的警报。
    Trichinellosis is a zoonotic disease caused by Trichinella, with the main source of infection being the consumption of pork and pork-derived products. However, it can also be acquired from eating the meat from wild animals targeted for sport hunting. The objectives of this study were: 1) to develop and implement a molecular method for the identification of Sus scrofa (pig and wild boar) and Puma concolor (Puma) meat in sausages eaten raw, which were linked to trichinellosis outbreaks occurring in Córdoba, Buenos Aires and La Pampa provinces, Argentina, in 2010, 2021, and 2022, respectively; and 2) to identify the Trichinella species present in the food. Specific primers were designed for PCR amplification and nucleotide sequencing of a region of the mitochondrial cytochrome b gene from both host species. Samples from the mentioned outbreaks were analysed, and the molecular identification of Trichinella spp. larvae was also performed. Results of the species identification system revealed that sausages from Córdoba and Buenos Aires had a mixed composition of pork and puma meat, while those from La Pampa contained puma meat only. Trichinella spiralis was implicated in all three outbreaks. The species identification system developed and implemented in this study revealed two host species of Trichinella related to human cases, and alerts about the risk of zoonotic transmission to humans through infected puma meat.
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  • 文章类型: Journal Article
    目的:本研究旨在调查gibsoni巴贝斯虫的遗传多样性,犬巴贝斯虫病的病原体,并评估自然感染的狗中是否存在抗atovaquone的分离株。
    方法:对确认为双歧杆菌感染的24份血样进行基于cytb基因的PCR扩增和测序。在使用生物信息学软件分析cytb基因的核苷酸序列的基础上,进行了吉布氏芽孢杆菌的遗传表征以及检测导致atovaquone抗性的点突变的尝试。
    结果:研究结果表明,调查中的B.gibsoni分离株与亚洲基因型具有高核苷酸同一性,范围从98.41到98.69%。值得注意的是,没有一个分离物携带与atovaquone耐药相关的cytb基因变异。系统发育分析显示,大多数分离株与来自日本和中国的分离株聚集在一起,除了一个孤立的形成一个不同的亚分化。单倍型网络分析表明,在双歧杆菌分离株中具有22种不同的单倍型,具有很高的多样性。强调研究群体内的遗传变异性。
    结论:结论:在所研究的24个B.gibsoni分离株中,cytb基因表现出显着的保守性,该研究代表了在印度狗中使用cytb基因对B.gibsoni进行的首次遗传多样性评估。这些发现揭示了该地区B.gibsoni的遗传特征,并为解决这种威胁狗生命的疾病带来的挑战提供了宝贵的见解。
    OBJECTIVE: The study aimed to investigate genetic diversity in Babesia gibsoni, the causative agent of canine babesiosis, and to assess the presence of atovaquone-resistant isolates in naturally infected dogs.
    METHODS: A total of 24 blood samples confirmed for B. gibsoni infection was subjected to PCR amplification and sequencing based on cytb gene. Genetic characterization of B. gibsoni as well as attempts to detect the point mutation rendering atovaquone resistance was carried out based on the analysis of nucleotide sequence of cytb gene using bioinformatics software.
    RESULTS: The findings indicated that the B. gibsoni isolates in the investigation exhibited a high nucleotide identity with the Asian genotype, ranging from 98.41 to 98.69%. Notably, none of the isolates carried cytb gene variants associated with atovaquone resistance. Phylogenetic analysis revealed clustering of most isolates with those from Japan and China, except for one isolate forming a distinct subclade. Haplotype network analysis indicated a high diversity with 22 distinct haplotypes among the B. gibsoni isolates, emphasizing the genetic variability within the studied population.
    CONCLUSIONS: In conclusion, the cytb gene exhibited remarkable conservation among the twenty-four B. gibsoni isolates studied and the study represents the first genetic diversity assessment of B. gibsoni using the cytb gene in dogs from India. These findings shed light on the genetic characteristics of B. gibsoni in the region and provide valuable insight for addressing the challenges posed by this life-threatening disease in dogs.
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  • 文章类型: Journal Article
    首次在贝加尔湖海豹Pusasibirica中使用几个时空样本研究了两个mtDNA基因座(细胞色素b基因和控制区)中的核苷酸序列多样性。发现人口在进化上很年轻,并且处于人口扩张阶段。
    Nucleotide sequence diversity in two mtDNA loci (the cytochrome b gene and the control region) was for the first time studied in the Baikal seal Pusa sibirica with the use of several spatiotemporal samples. The population was found to be evolutionarily young and to be in the stage of demographic expansion.
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  • 文章类型: Journal Article
    家禽的血液寄生虫感染,比如疟原虫,对家禽业造成严重威胁,因为它们有可能造成经济损失。迄今为止,在印度尼西亚,对感染家禽的不同疟原虫物种的形态学和分子检测研究不足。因此,本研究旨在分析疟原虫的形态和分子特征。以及日惹三个地区蛋鸡疟原虫感染的几个诱发因素,印度尼西亚。
    从位于日惹三个地区的13个农场中收集了一百零五个蛋鸡的血液样本(Sleman,班图尔,和KulonProgo)在2022年9月至11月之间。对血液样品进行显微镜和聚合酶链反应(PCR)分析。使用基本的局部比对搜索工具进行测序以鉴定细胞色素b的核苷酸结构。使用MEGA-X软件进行疟原虫的系统发育分析。
    显微镜检查显示血液寄生虫感染阳性17/105(16.19%)。滋养体,红细胞meronts,在血液样本中发现了疟原虫的微配子细胞。根据形态学检查,样本中发现的物种接近于近核疟原虫。聚合酶链反应检查显示21/60样品对疟原虫呈阳性(35%)。从测序样品中鉴定的疟原虫物种被证明是近核疟原虫。泰国近核假单胞菌与样本密切相关(99.64%-100%),遗传距离为0%-1%。此外,年龄,人口,和笼型与疟原虫感染无显著相关。
    基于显微镜和PCR检查,在日惹三个地区发现的疟原虫是近核疟原虫。日惹三个地区的样本之间的遗传距离与泰国和日本的近核假单胞菌密切相关(0%-1%)。疟原虫感染与年龄无关,笼型,或人口。
    UNASSIGNED: Blood parasite infections in poultry, such as Plasmodium, are a serious threat to the poultry industry due to their potential to cause economic losses. To date, there has been inadequate research on the morphological and molecular detection of the different Plasmodium species that infect poultry in Indonesia. Therefore, this study aimed to analyze the morphological and molecular characteristics of Plasmodium spp. and the several predisposing factors for Plasmodium infection in layer chickens from three districts of Yogyakarta, Indonesia.
    UNASSIGNED: One hundred and five blood samples from layer chickens were collected from 13 farms located in three districts of Yogyakarta (Sleman, Bantul, and Kulon Progo) between September and November 2022. Blood samples were subjected to microscopic and polymerase chain reaction (PCR) analyses. Sequencing was performed using basic local alignment search tools to identify the nucleotide structure of cytochrome b. Phylogenetic analysis of Plasmodium was performed using the MEGA-X software.
    UNASSIGNED: Microscopic examination revealed that 17/105 positives (16.19%) were positive for blood parasite infection. Trophozoites, erythrocytic meronts, and microgametocytes of Plasmodium were found in blood samples. Based on the morphological examination, the species found in the samples was close to Plasmodium juxtanucleare. Polymerase chain reaction examination revealed that 21/60 samples were positive for Plasmodium (35%). The Plasmodium species identified from the sequenced samples were proven to be P. juxtanucleare. The P. juxtanucleare from Thailand was closely related to samples (99.64%-100%) with a genetic distance of 0%-1%. In addition, age, population, and cage type were not significantly associated with Plasmodium infection.
    UNASSIGNED: Based on microscopic and PCR examinations, the Plasmodium species found in the three districts of Yogyakarta was P. juxtanucleare. The genetic distance between samples from the three districts of Yogyakarta was closely related (0%-1%) to P. juxtanucleare from Thailand and Japan. There was no correlation between Plasmodium infection and age, cage type, or population.
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  • 文章类型: Journal Article
    禽血孢子虫(Haemoproteus,白细胞,疟原虫)是媒介传播的原生动物寄生虫,在各种鸟类中非常普遍。尽管如此,它们对鸟类健康的重要性,物种下降,或对康复成功的影响被低估。这项研究旨在确定十二种分类目的三十四种七十种野生鸟类的尸检后,血孢子虫寄生虫的发生和多样性。使用细胞色素b基因的PCR扩增评估禽血孢子虫DNA的检测。所有样本禽类中48.6%为阳性,疟原虫阳性率为24.3%。/血液变形杆菌。白细胞总数为44.3%。混合感染相当于所有测试鸟类的20%。对几个选定的样本进行测序显示,恶性疟原虫和白细胞菌种的不同谱系。这项研究提供了来自葡萄牙中部康复中心的野鸟血孢子虫感染的基线描述。结果表明,有必要测试和监测可能破坏不同鸟类恢复过程的感染。需要进一步研究这些血孢子虫物种在保存在保护中心的鸟类中的发生,以了解对鸟类健康的影响。
    Avian haemosporidian (Haemoproteus, Leucocytozoon, Plasmodium) are vector-transmitted protozoan parasites highly prevalent in various bird species. Still, their importance for bird health, species decline, or impact on rehabilitation success is underestimated. This study aimed to determine the occurrence and diversity of haemosporidian parasites after necropsies of seventy wild birds from thirty-four species of twelve taxonomic orders. Detection of avian haemosporidian DNA was evaluated using PCR amplification of the cytochrome b gene. 48.6% of all sampled birds were positive, with 24.3% positive for Plasmodium spp./Haemoproteus spp. and 44.3% for Leucocytozoon spp. Mixed infections corresponded to 20% of all tested birds. Sequencing of several selected samples revealed the infection of Plasmodium matutinum, Plasmodium relictum and different lineages of Leucocytozoon spp. This study provides a baseline description of haemosporidian infections in wild birds from a rehabilitation center in central Portugal. The results show the necessity to test and monitor possible infections that undermine recovery processes for different birds. Further research into the occurrence of these haemosporidian species in birds kept in conservation centers is needed to understand the impact on bird health.
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  • 文章类型: Journal Article
    在北半球的温带和亚北极地区发现了双头鱼和树状双头鱼。但它们也存在于南美洲的南部核心国家,智利和阿根廷。来自南美的D.latus和D.dendendicus的遗传特征尚未完全确定。本研究旨在通过线粒体细胞色素c氧化酶亚基I基因(cox1)和细胞色素b基因(cob)的单倍型网络分析,了解智利的D.latus和D.dendicus的遗传特征。以及他们的起源。Dibothriocephaluslatus和D.dendendicuspleroceroid幼虫是从在RegióndeLosLagos的Llanquihue湖中捕获的野生和/或野生鲑鱼中获得的,和洛斯里奥斯雷贡的潘古皮里湖,位于智利中部南部。D.latus的单倍型分析显示,cox1中的H1和cob中的H2是世界上D.latus常见的关键单倍型,包括智利,这两个基因在D.latus中表现出有限的遗传多样性。据先前报道,D.latus是在19世纪由欧洲和俄罗斯移民带入南美的。相比之下,树枝状D.的cox1和cob都显示出相当大的遗传多样性,智利和北半球的树枝状芽孢杆菌种群之间没有常见的单倍型。更有趣的是,在智利树枝状D.中检测到的两种cob单倍型(H24,H25)与在北美树枝状D.中检测到的单倍型(H30,H31)密切相关,强烈暗示智利的树枝状D是由北美的食肉迁徙鸟类带来的。据估计,智利的D.dendendicus与北半球的D.dendicus在大约111万年前有遗传差异,早在人类迁移到南美洲南部之前。
    Dibothriocephalus latus and Dibothriocephalus dendriticus are found throughout the temperate and sub-arctic zones of the northern hemisphere, but they are also found in the southern core countries of South America, Chile and Argentina. Genetic characteristics of D. latus and D. dendriticus from South America have yet to be fully defined. The present study aimed to understand the genetic characteristics of D. latus and D. dendriticus from Chile by haplotype network analysis of mitochondrial cytochrome c oxidase subunit I gene (cox1) and cytochrome b gene (cob), as well as their origins. Dibothriocephalus latus and D. dendriticus plerocercoid larvae were obtained from feral and/or wild salmonids captured in Lake Llanquihue in Región de Los Lagos, and Lake Panguipulli in Región de Los Ríos, located south of central Chile. Haplotype analysis of D. latus revealed that H1 in cox1 and H2 in cob are the key haplotypes common to D. latus across the world, including Chile, and both genes exhibited limited genetic diversity in D. latus. It was assumed that D. latus was brought into South America by European and Russian immigrants in the 19th century as previously reported. In contrast, both the cox1 and cob of D. dendriticus display considerable genetic diversity, with no common haplotypes between D. dendriticus populations from Chile and the northern hemisphere. More intriguingly, two cob haplotypes (H24, H25) detected in Chilean D. dendriticus were closely linked to haplotypes (H30, H31) detected in North American D. dendriticus, strongly implying that D. dendriticus in Chile was brought by piscivorous migrating birds from North America. It has also been estimated that the D. dendriticus from Chile genetically diverged from the D. dendriticus from the northern hemisphere approximately 1.11 million years ago, long before humans migrated to the southern parts of South America.
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  • 文章类型: Journal Article
    proproteuscolumbae是世界范围内报道的野鸽(Columbalivia)的常见血吸虫寄生虫。在泰国,由于稻田的单一栽培,野鸽的数量正在增加。然而,关于这些鸽子种群中存在H.columbae的报道有限。该研究的目的是表征野鸽中的H.columbae。使用显微镜和分子方法检查了总共87只野鸽。在大约27.6%的鸽子中检测到了proproteuscolumbae,并描述了它们的形态特征。然后将H.columbae的部分细胞色素b(cytb)基因序列鉴定为三个常见谱系(HAECOL1,COLIV03和COQUI05)。通过强调在这一鸽子种群中常见的H.columbae的形态和遗传特征,这项研究提供了有关血吸虫寄生虫的基本区域知识,这可能有利于未来的分类学和系统地理学研究。
    Haemoproteus columbae is a common haemosporidian parasite of wild pigeons (Columba livia) reported worldwide. In Thailand, the wild pigeon population is increasing due to paddy field monoculture. However, there are limited reports on the presence of H. columbae in these pigeon populations. The aim of the study was to characterize H. columbae in wild pigeons. A total of 87 wild pigeons were examined using microscopic and molecular methods. Haemoproteus columbae was detected in approximately 27.6% of pigeons and their morphological characteristics were described. The partial cytochrome b (cyt b) gene sequence of H. columbae was then characterized into three common lineages (HAECOL1, COLIV03, and COQUI05). By highlighting the morphologic and genetic characteristics of H. columbae commonly found in this population of pigeons, this study provides essential regional knowledge about haemosporidian parasites that could benefit future taxonomic and phylogeographic studies.
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  • 文章类型: Journal Article
    血球孢子虫(Apicomplex,血孢菌)是感染脊椎动物血细胞并通过载体传播的原生动物。在脊椎动物中,鸟类拥有最大的血球多样性,历史上分为3个属:血液变形杆菌,白细胞和疟原虫,禽类疟疾的病原体。在南美洲,现有的血球数据在空间和时间上是分散的,因此,需要加强监测,以改善这些寄生虫的确定和诊断。在2020年和2021年的非繁殖季节,作为阿根廷大西洋沿岸候鸟种群健康研究的一部分,捕获了60只普通燕鸥(Sternahirundo)并放血。获得血液样品和血液涂片。对58个样本进行了疟原虫筛查,血液变形杆菌和白细胞,以及通过巢式聚合酶链反应和涂片的显微镜检查来检测巴贝虫寄生虫。发现两个疟原虫阳性样品。本研究首次发现了细胞色素b谱系,并且接近其他鸟类中发现的疟原虫谱系。这项研究中发现的血液寄生虫的低患病率(3.6%)与以前关于海鸟的研究报告的相似,包括Charadriformes.我们的研究结果提供了有关南美最南端的Charadriiforms中的血孢子虫寄生虫的分布和患病率的新信息,仍未得到充分研究。
    Haemosporidia (Apicomplexa, Haemosporida) are protozoa that infect vertebrate blood cells and are transmitted by vectors. Among vertebrates, birds possess the greatest diversity of haemosporidia, historically placed in 3 genera: Haemoproteus, Leucocytozoon and Plasmodium, the causative agent of avian malaria. In South America, existing data on haemosporidia are spatially and temporally dispersed, so increased surveillance is needed to improve the determination and diagnosis of these parasites. During the non-breeding season in 2020 and 2021, 60 common terns (Sterna hirundo) were captured and bled as part of ongoing research on the population health of migratory birds on the Argentinian Atlantic coast. Blood samples and blood smears were obtained. Fifty-eight samples were screened for Plasmodium, Haemoproteus and Leucocytozoon, as well as for Babesia parasites by nested polymerase chain reaction and by microscopic examination of smears. Two positive samples for Plasmodium were found. The cytochrome b lineages detected in the present study are found for the first time, and are close to Plasmodium lineages found in other bird orders. The low prevalence (3.6%) of haemoparasites found in this research was similar to those reported for previous studies on seabirds, including Charadriiformes. Our findings provide new information about the distribution and prevalence of haemosporidian parasites from charadriiforms in the southernmost part of South America, which remains understudied.
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  • 文章类型: Journal Article
    耐药的gibsoni巴贝斯虫菌株的发展和增加是兽医从业人员的严重关切。在随后的几种治疗策略中,布帕伐醌-阿奇霉素联合治疗在亚洲广泛用于治疗小巴贝虫感染。本研究通过分析B.gibsoni的细胞色素b基因序列,重点研究了布帕伐醌诱导的B.gibsoni突变。在12只接受布帕伐喹-阿奇霉素联合治疗的狗中,其中8对耐药的吉布氏芽孢杆菌感染无反应。在10天治疗计划之前和之后记录血液学参数,并且观察到这些值的改善。在10天治疗计划后,对具有持续性寄生虫血症的8个样品进行细胞色素b基因扩增并分析突变。在分析中,在25个突变中,只有9个在本质上是非同义的;T15N,S48T,P152L,V167I,A217T,F258Y,M311I,S336G,A337S.在Q01(130-148)结合区和药物结合区Q02(244-266)内的F258Y附近观察到突变P152L。
    The development and rise in drug-resistant Babesia gibsoni strain is a serious concern among veterinary practitioners. Of several therapeutic strategies followed, buparvaquone-azithromycin combination therapy is widely used to treat small Babesia infections in Asia. The present study focused on buparvaquone-induced mutations in B. gibsoni by analyzing its cytochrome b gene sequence. Among the 12 dogs that were administered with buparvaquone-azithromycin combination therapy, 8 of them were unresponsive to drug-resistant B. gibsoni infection. Hematological parameters were recorded before and after 10 day treatment plan and an improvement in these values was observed. Eight samples with persistent parasitemia after 10 day treatment plan was subjected to cytochrome b gene amplification and analyzed for mutations. On analysis, out of the 25 mutations only 9 were non-synonymous in nature; T15N, S48T, P152L, V167I, A217T, F258Y, M311I, S336G, A337S. Mutation P152L was seen near to Q01 (130-148) binding region and F258Y within the drug binding region Q02 (244-266).
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  • 文章类型: Journal Article
    动物园代表了保护生物清单和遗传多样性的专门中心,允许识别关键保护类别中的多个物种。然而,可能与各种外寄生虫有关的多种脊椎动物的紧密共存可能是多种感染原传播的原因,其中蜱传病原体突出。在这些地区,几种动物通常生活在狭小的空间里,靠近其他野生动物,游客和饲养员。在墨西哥,对动物花园中节肢动物传播的疾病媒介知之甚少。出于这个原因,这项研究的目的是确定在圈养动物中是否存在Babesia/Theileria。作为识别野生动物中媒介传播病原体项目的一部分,在MiguelAngeldeQuevedo动物园中采样了24只动物。通过扩增线粒体cytB基因和核糖体18S-rDNA的片段,可以实现巴贝虫/Theileria的分子鉴定。两个新热带骆驼(Lamaglama)对bigemina的Babesia检测呈阳性(2/3=66.6%)。我们的结果代表了墨西哥动物园圈养动物中Bigemina的首次记录,以及墨西哥新热带骆驼科动物中这种血液寄生虫的首次发现。
    Zoological gardens represent specialised centres for the preservation of biological inventories and genetic diversity, allowing the recognition of multiple species in critical conservation categories. However, the close coexistence of multiple species of vertebrates that may be associated with various species of ectoparasites may be the cause of the transmission of multiple infectious agents, among which tick-borne pathogens stand out. In these areas, several animal species usually live in a small space and proximity to other wildlife, visitors and keepers. In Mexico, little is known about the disease agents transmitted by arthropods in zoological gardens. For this reason, the aim of this study was to identify the presence of Babesia/Theileria in animals maintained in captivity. As a part of a project identifying vector-borne pathogens in wildlife, 24 animals were sampled in the Miguel Angel de Quevedo zoo. Molecular identification of Babesia/Theileria was realised through amplification of a fragment of the mitochondrial cytB gene and the ribosomal 18S-rDNA. Two neotropical camelids (Lama glama) tested positive (2/3 = 66.6%) to Babesia bigemina. Our results represent the first record of B. bigemina in animals in captivity in a zoological garden in Mexico and the first finding of this haemoparasite in neotropical camelids in Mexico.
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