CFU, colony-forming units

CFU , 菌落形成单位
  • 文章类型: Journal Article
    介导的肿瘤治疗在实验动物模型中取得了显著的抗肿瘤效果,但是详细的机制仍未解决。在这份报告中,通过比较沙门氏菌在携带黑色素瘤同种异体移植物的免疫活性和免疫缺陷小鼠中的肿瘤抑制作用,证实了宿主免疫反应在这一过程中的积极参与。由于鞭毛是细菌感染过程中宿主免疫反应的关键诱导剂,鞭毛被基因破坏,以分析它们在沙门氏菌介导的癌症治疗中的参与。结果表明,鞭毛缺失菌株未能诱导显著的抗肿瘤作用,即使使用更多的细菌来抵消入侵效率的差异。鞭毛主要通过鞭毛蛋白/Toll样受体5(TLR5)信号通路激活免疫细胞。的确,我们发现通过重组鞭毛蛋白对TLR5信号的外源性激活和TLR5的外源性表达均增强了鞭毛缺陷型沙门氏菌对黑色素瘤的治疗功效。我们的研究强调了沙门氏菌介导的癌症治疗过程中通过鞭毛蛋白/TLR5信号通路与宿主免疫反应相互作用的治疗价值。从而提示TLR5激动剂在肿瘤免疫治疗中的潜在应用。
    mediated cancer therapy has achieved remarkable anti-tumor effects in experimental animal models, but the detailed mechanism remains unsolved. In this report, the active involvement of the host immune response in this process was confirmed by comparing the tumor-suppressive effects of Salmonella in immunocompetent and immunodeficient mice bearing melanoma allografts. Since flagella are key inducers of the host immune response during bacterial infection, flagella were genetically disrupted to analyse their involvement in Salmonella-mediated cancer therapy. The results showed that flagellum-deficient strains failed to induce significant anti-tumor effects, even when more bacteria were administered to offset the difference in invasion efficiency. Flagella mainly activate immune cells via Flagellin/Toll-like receptor 5 (TLR5) signalling pathway. Indeed, we showed that exogenous activation of TLR5 signalling by recombinant Flagellin and exogenous expression of TLR5 both enhanced the therapeutic efficacy of flagellum-deficient Salmonella against melanoma. Our study highlighted the therapeutic value of the interaction between Salmonella and the host immune response through Flagellin/TLR5 signalling pathway during Salmonella-mediated cancer therapy, thereby suggesting the potential application of TLR5 agonists in the cancer immune therapy.
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  • 文章类型: Journal Article
    帕金森病(PD)是第二常见的神经退行性疾病,但是由于对PD发病机制的了解有限,目前的PD治疗方法都不能阻止疾病的进展。在PD发展中,受肠道微生物群影响的大脑和胃肠道系统之间的交流被称为微生物群-肠-脑轴。然而,微生物群失调在PD发育中的明确机制尚未得到很好的阐明。FLZ,一个新的squamosamide衍生物,已被证明在许多PD模型中有效,并且正在中国进行治疗PD的I期临床试验。此外,我们先前的药代动力学研究表明,肠道菌群可以调节体内FLZ的吸收。我们研究的目的是评估FLZ治疗对PD的保护作用,并通过使用FLZ作为工具进一步探索PD的潜在微生物群相关机制。在目前的研究中,长期口服鱼藤酮用于诱导小鼠模型以模拟PD的病理过程。在这里,我们发现FLZ治疗缓解了胃肠功能障碍,运动症状,鱼藤酮攻击小鼠的多巴胺能神经元死亡。16SrRNA测序发现,鱼藤酮诱导的PD相关微生物群改变可通过FLZ处理逆转。值得注意的是,FLZ给药减轻肠道炎症和肠屏障破坏,随后抑制全身性炎症。最终,FLZ治疗通过抑制黑质(SN)中星形胶质细胞和小胶质细胞的激活来恢复血脑屏障结构并抑制神经炎症。进一步的机制研究表明,FLZ处理抑制了SN和结肠中的TLR4/MyD88/NF-κB途径。总的来说,FLZ治疗通过抑制TLR4途径改善微生物群菌群失调保护PD模型,这有助于其神经保护作用下的潜在机制之一。我们的研究还支持微生物群-肠-脑轴在PD发病机理中的重要性,提示其作为PD治疗新的治疗靶点的潜在作用。
    Parkinson\'s disease (PD) is the second most common neurodegenerative disease, but none of the current treatments for PD can halt the progress of the disease due to the limited understanding of the pathogenesis. In PD development, the communication between the brain and the gastrointestinal system influenced by gut microbiota is known as microbiota-gut-brain axis. However, the explicit mechanisms of microbiota dysbiosis in PD development have not been well elucidated yet. FLZ, a novel squamosamide derivative, has been proved to be effective in many PD models and is undergoing the phase I clinical trial to treat PD in China. Moreover, our previous pharmacokinetic study revealed that gut microbiota could regulate the absorption of FLZ in vivo. The aims of our study were to assess the protective effects of FLZ treatment on PD and to further explore the underlying microbiota-related mechanisms of PD by using FLZ as a tool. In the current study, chronic oral administration of rotenone was utilized to induce a mouse model to mimic the pathological process of PD. Here we revealed that FLZ treatment alleviated gastrointestinal dysfunctions, motor symptoms, and dopaminergic neuron death in rotenone-challenged mice. 16S rRNA sequencing found that PD-related microbiota alterations induced by rotenone were reversed by FLZ treatment. Remarkably, FLZ administration attenuated intestinal inflammation and gut barrier destruction, which subsequently inhibited systemic inflammation. Eventually, FLZ treatment restored blood-brain barrier structure and suppressed neuroinflammation by inhibiting the activation of astrocytes and microglia in the substantia nigra (SN). Further mechanistic research demonstrated that FLZ treatment suppressed the TLR4/MyD88/NF-κB pathway both in the SN and colon. Collectively, FLZ treatment ameliorates microbiota dysbiosis to protect the PD model via inhibiting TLR4 pathway, which contributes to one of the underlying mechanisms beneath its neuroprotective effects. Our research also supports the importance of microbiota-gut-brain axis in PD pathogenesis, suggesting its potential role as a novel therapeutic target for PD treatment.
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  • 文章类型: Journal Article
    背景:多重感染暴发与世界范围内的十二指肠镜污染有关。然而,在已发表的测试该主题的研究中,患者就绪型十二指肠镜的污染率差异很大.我们旨在根据现有数据估计内镜逆行胰胆管造影术(ERCP)的再处理十二指肠镜的污染率。
    方法:我们在PubMed和Embase数据库中搜索了2010年1月1日至2020年3月10日的引用,这些数据库调查了重新处理的患者准备十二指肠镜的污染率。分析中排除了未评估十二指肠镜以外的其他类型内窥镜的研究。研究资格和数据提取由三名评审员独立评估。基于比例分布的随机效应模型(REM)用于计算重新处理的患者准备十二指肠镜的合并总污染率。通过比较单一高水平消毒(HLD)与双重HLD和环氧乙烷(EtO)气体灭菌,进行了亚组分析以评估使用不同后处理方法时的污染率。此外,我们调查了爆发后进行的研究与非爆发开始的研究之间的污染率.
    结果:我们确定了15项符合纳入的研究,其中包括来自13112个样本的925个受污染的十二指肠镜。计算的总加权污染率为15.25%±0.018(95%置信区间[Cl]:11.74%-18.75%)。仅使用HLD后的污染率为16.14%±0.019(95%Cl:12.43%-19.85%),使用dHLD或EtO后,污染率降至9.20%±0.025(95%Cl:4.30%-14.10%)。爆发后进行的研究(n=4)显示5.72%±0.034(95%Cl:0.00%-12.43%)的污染率,非暴发开始的研究(n=11)显示污染率为21.50%±0.031(95%Cl:15.35%-27.64%)。
    结论:这是第一个评估用于ERCP的患者准备十二指肠镜污染率的荟萃分析。根据现有文献,我们的分析表明,再处理的患者就绪型十二指肠镜的污染率为15.25%.此外,分析表明,dHLD和EtO后处理方法优于单一HLD,但在正确清洁十二指肠镜方面仍然效率不高。此外,与未开始爆发的研究相比,在爆发后进行的研究并未导致更高的污染率.
    背景:作者没有获得资助,作者身份,和/或本文的出版。
    BACKGROUND: Multiple infection outbreaks have been linked to contaminated duodenoscopes worldwide. However, the contamination rate of patient-ready duodenoscopes varies highly amongst published studies testing this subject. We aimed to estimate the contamination rate of reprocessed patient-ready duodenoscopes for endoscopic retrograde cholangio-pancreatography (ERCP) based on currently available data.
    METHODS: We searched the PubMed and Embase databases from January 1, 2010 until March 10, 2020, for citations investigating contamination rates of reprocessed patient-ready duodenoscopes. Studies not assessing other types of endoscopes than duodenoscopes were excluded from the analysis. Study eligibility and data extraction was evaluated by three reviewers independently. A random-effects model (REM) based on the proportion distribution was used to calculate the pooled total contamination rate of reprocessed patient-ready duodenoscopes. Subgroup analyses were carried out to assess contamination rates when using different reprocessing methods by comparing single high-level disinfection (HLD) with double HLD and ethylene oxide (EtO) gas sterilization. Additionally, we investigated the contamination rate between studies conducted following an outbreak compared to non-outbreak-initiated studies.
    RESULTS: We identified 15 studies that fulfilled the inclusion, which included 925 contaminated duodenoscopes from 13,112 samples. The calculated total weighted contamination rate was 15.25% ± 0.018 (95% confidence interval [Cl]: 11.74% - 18.75%). The contamination rate after only using HLD was 16.14% ± 0.019 (95% Cl: 12.43% - 19.85%) and after using either dHLD or EtO the contamination rate decreased to 9.20% ± 0.025 (95% Cl: 4.30% - 14.10%). Studies conducted following an outbreak (n=4) showed a 5.72% ± 0.034 (95% Cl: 0.00% - 12.43%) contamination rate, and non-outbreak-initiated studies (n=11) revealed a contamination rate of 21.50% ± 0.031 (95% Cl: 15.35% - 27.64%).
    CONCLUSIONS: This is the first meta-analysis to estimate the contamination rate of patient-ready duodenoscopes used for ERCP. Based on the available literature, our analysis demonstrates that there is a 15.25% contamination rate of reprocessed patient-ready duodenoscopes. Additionally, the analysis indicates that dHLD and EtO reprocessing methods are superior to single HLD but still not efficient in regards to cleaning the duodenoscopes properly. Furthermore, studies conducted following an outbreak did not entail a higher contamination rate compared to non-outbreak-initiated studies.
    BACKGROUND: The authors received no financial support for the research, authorship, and/or publication of this article.
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  • 文章类型: Journal Article
    Coinoculation of plants with mixtures of beneficial microbes sometimes produces synergistic effects. In this study, the effect of soybean coinoculation with the N2-fixing Bradyrhizobium japonicum E109 and the biocontrol fungus Trichoderma harzianum Th5cc was analyzed. Nodulation by E109 was not hampered by Th5cc, which antagonized five out of seven soybean pathogens tested. Furthermore, Th5cc relieved nitrate-inhibition of nodulation, enabling the formation of nodules containing infected cells with bacteroids in the presence of the otherwise inhibitory 10 mM KNO3. Th5cc released micromolar amounts of auxin, and addition of 11 μM indoleacetic acid to soybean plants inoculated with E109 in the absence of Th5cc also induced nodulation in the presence of 10 mM KNO3. Thus, Th5cc may release auxins into the soybean rhizosphere, which hormones might participate in overcoming the nitrate-inhibition of nodulation. Our results suggest that soybean plants coinoculated with these microorganisms might benefit from biocontrol while contributing to soil-nitrogen preservation.
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  • 文章类型: Journal Article
    ProBiotic-4是由乳酸双歧杆菌组成的益生菌制剂,干酪乳杆菌,双歧杆菌,和嗜酸乳杆菌.本研究旨在探讨ProBiotic-4对微生物群-肠-脑轴和认知缺陷的影响,并使用衰老加速小鼠俯卧8(SAMP8)小鼠探索潜在的分子机制。将ProBiotic-4口服给予9个月大的SAMP8小鼠12周。我们观察到ProBiotic-4显着改善了记忆缺陷,大脑神经元和突触损伤,胶质激活,老年SAMP8小鼠粪便和大脑中的微生物群组成。ProBiotic-4实质上减弱了与衰老相关的肠屏障和血脑屏障的破坏,白细胞介素-6和肿瘤坏死因子-α在mRNA和蛋白质水平上都降低,降低血浆和脑脂多糖(LPS)浓度,toll样受体4(TLR4)表达,和核因子-κB(NF-κB)在大脑中的核易位。此外,ProBiotic-4不仅显著降低了γ-H2AX的水平,8-羟基去氧鸟苷,和视黄酸诱导基因-I(RIG-I),它还废除了大脑中的RIG-I多聚化。这些发现表明,用益生菌靶向肠道微生物群可能对衰老中微生物群-肠道-大脑轴和认知功能的缺陷具有治疗潜力。其机制与抑制TLR4和RIG-I介导的NF-κB信号通路和炎症反应有关。
    ProBiotic-4 is a probiotic preparation composed of Bifidobacterium lactis, Lactobacillus casei, Bifidobacterium bifidum, and Lactobacillus acidophilus. This study aims to investigate the effects of ProBiotic-4 on the microbiota-gut-brain axis and cognitive deficits, and to explore the underlying molecular mechanism using senescence-accelerated mouse prone 8 (SAMP8) mice. ProBiotic-4 was orally administered to 9-month-old SAMP8 mice for 12 weeks. We observed that ProBiotic-4 significantly improved the memory deficits, cerebral neuronal and synaptic injuries, glial activation, and microbiota composition in the feces and brains of aged SAMP8 mice. ProBiotic-4 substantially attenuated aging-related disruption of the intestinal barrier and blood-brain barrier, decreased interleukin-6 and tumor necrosis factor-α at both mRNA and protein levels, reduced plasma and cerebral lipopolysaccharide (LPS) concentration, toll-like receptor 4 (TLR4) expression, and nuclear factor-κB (NF-κB) nuclear translocation in the brain. In addition, not only did ProBiotic-4 significantly decreased the levels of γ-H2AX, 8-hydroxydesoxyguanosine, and retinoic-acid-inducible gene-I (RIG-I), it also abrogated RIG-I multimerization in the brain. These findings suggest that targeting gut microbiota with probiotics may have a therapeutic potential for the deficits of the microbiota-gut-brain axis and cognitive function in aging, and that its mechanism is associated with inhibition of both TLR4-and RIG-I-mediated NF-κB signaling pathway and inflammatory responses.
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  • 文章类型: Journal Article
    对开肠的任何操作都会对肠道微生物组产生介入性影响,手术压力会引发细菌移位;因此,这将是手术后确定肠道微生物组的基础。监测接受益生菌和安慰剂的术后婴儿的微生物组的动态变化可以提供有关肠道定植和潜在细菌过度生长的重要信息。这项研究的目的是评估益生菌补充对住院时间的影响,肠外营养的持续时间,胃肠手术后新生儿的饲料耐受性。
    Any manipulation on open bowel causes interventional impact on gut microbiome, and surgical stress triggers bacterial translocation; thus, it will be fundamental to determine gut microbiome after surgery. Monitoring dynamic changes in microbiome of post-surgical infants who received probiotics and placebo could provide with important information about gut colonization and potential bacterial overgrowth. The purpose of this study is to assess the effect of probiotics supplementation on length of hospital stay, duration of parenteral nutrition, and feed tolerance in neonates after gastrointestinal surgery.
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  • 文章类型: Journal Article
    Analogues of the anti-tuberculosis drug bedaquiline, bearing a 3,5-dimethoxy-4-pyridyl C-unit, retain high anti-bacterial potency yet exert less inhibition of the hERG potassium channel, in vitro, than the parent compound. Two of these analogues (TBAJ-587 and TBAJ-876) are now in preclinical development. The present study further explores structure-activity relationships across a range of related 3,5-disubstituted-4-pyridyl C-unit bedaquiline analogues of greatly varying lipophilicity (clogP from 8.16 to 1.89). This broader class shows similar properties to the 3,5-dimethoxy-4-pyridyl series, being substantially more potent in vitro and equally active in an in vivo (mouse) model than bedaquiline, while retaining a lower cardiovascular risk profile through greatly attenuated hERG inhibition.
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  • 文章类型: Journal Article
    The severity of pneumonia in respiratory syncytial virus (RSV) infection is strongly related to host immune response and external factors such as bacteria and environmental chemicals. We investigated the effect of inactivated Streptococcus pneumoniae (ISP) as non-pathogenic particles on the severity of pneumonia in RSV-infected mice. Mice were intranasally exposed to ISP before RSV infection. On day 5 post-infection, we examined tissues, virus titer, and infiltrated cells in the lungs. The ISP did not cause significant histopathological effects in the lungs of RSV infected mice, but reduced virus titer. It also reduced the ratio of lymphocyte infiltration into the lungs and consequently the ratio of macrophage increased. In addition, we found that ISP increased RANTES level in bronchoalveolar lavage fluid from RSV-infected mice on day 1 post-infection, but reduced type I interferon levels. Thus, ISP did not exacerbate pneumonia in RSV infection, rather, it might mildly reduce the severity. We characterize and discuss the inherent activity of ISP as non-pathogenic particles inducing the role of RANTES on the pneumonia in RSV infection.
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  • 文章类型: Journal Article
    Bedaquiline is a new drug of the diarylquinoline class that has proven to be clinically effective against drug-resistant tuberculosis, but has a cardiac liability (prolongation of the QT interval) due to its potent inhibition of the cardiac potassium channel protein hERG. Bedaquiline is highly lipophilic and has an extremely long terminal half-life, so has the potential for more-than-desired accumulation in tissues during the relatively long treatment durations required to cure TB. The present work is part of a program that seeks to identify a diarylquinoline that is as potent as bedaquiline against Mycobacterium tuberculosis, with lower lipophilicity, higher clearance, and lower risk for QT prolongation. Previous work led to the identification of compounds with greatly-reduced lipophilicity compounds that retain good anti-tubercular activity in vitro and in mouse models of TB, but has not addressed the hERG blockade. We now present compounds where the C-unit naphthalene is replaced by a 3,5-dialkoxy-4-pyridyl, demonstrate more potent in vitro and in vivo anti-tubercular activity, with greatly attenuated hERG blockade. Two examples of this series are in preclinical development.
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  • 文章类型: Journal Article
    The seamless ligation cloning extract (SLiCE) method is a novel seamless DNA cloning tool that utilizes homologous recombination activities in Escherichia coli cell lysates to assemble DNA fragments into a vector. Several laboratory E. coli strains can be used as a source for the SLiCE extract; therefore, the SLiCE-method is highly cost-effective.The SLiCE has sufficient cloning ability to support conventional DNA cloning, and can simultaneously incorporate two unpurified DNA fragments into vector. Recently, many seamless DNA cloning kits have become commercially available; these are generally very convenient, but expensive. In this study, we evaluated the cloning efficiencies between a simple and highly cost-effective SLiCE-method and a commercial kit under various molar ratios of insert DNA fragments to vector DNA. This assessment identified that the SLiCE from a laboratory E. coli strain yielded 30-85% of the colony formation rate of a commercially available seamless DNA cloning kit. The cloning efficiencies of both methods were highly effective, exhibiting over 80% success rate under all conditions examined. These results suggest that SLiCE from a laboratory E. coli strain can efficiently function as an effective alternative to commercially available seamless DNA cloning kits.
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