Assay Technology

  • 文章类型: Journal Article
    细胞热移位测定(CETSA)使得能够研究细胞环境中的蛋白质-配体相互作用。它提供了有关小分子和大分子配体在相关生理环境中的结合亲和力和特异性的有价值的信息,从而形成了药物发现的独特工具。尽管存在用于扩展CETSA的高通量实验室协议,随后的数据分析和质量控制仍然很费力,限制了实验通量。这里,我们引入了可扩展且稳健的数据分析工作流程,该流程允许将CETSA整合到常规高通量筛查(HT-CETSA)中.这个新的工作流程自动化数据分析,并纳入质量控制(QC),包括异常值检测,样品和板QC,和结果分类。我们描述了工作流程,并展示了它对典型实验工件的鲁棒性,显示缩放效果,并讨论了通过消除手动数据处理步骤来实现数据分析自动化的影响。
    The Cellular Thermal Shift Assay (CETSA) enables the study of protein-ligand interactions in a cellular context. It provides valuable information on the binding affinity and specificity of both small and large molecule ligands in a relevant physiological context, hence forming a unique tool in drug discovery. Though high-throughput lab protocols exist for scaling up CETSA, subsequent data analysis and quality control remain laborious and limit experimental throughput. Here, we introduce a scalable and robust data analysis workflow which allows integration of CETSA into routine high throughput screening (HT-CETSA). This new workflow automates data analysis and incorporates quality control (QC), including outlier detection, sample and plate QC, and result triage. We describe the workflow and show its robustness against typical experimental artifacts, show scaling effects, and discuss the impact of data analysis automation by eliminating manual data processing steps.
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  • 文章类型: Journal Article
    II型糖尿病(T2D)的进展特征是β细胞质量的复杂和高度可变的损失,导致胰岛素分泌受损。已经使用有限的β细胞系和原代啮齿动物/人胰岛开发了旨在发现可以保护或恢复β细胞质量和功能的分子的许多T2D药物发现努力。各种高通量筛选方法已用于药物发现的背景下,包括基于荧光素酶的报告分析,葡萄糖刺激的胰岛素分泌,和高含量的筛选。在这种情况下,小分子发现的基石是使用永生化的啮齿动物β细胞系。虽然有见地,这种用法使人们对啮齿动物β细胞增殖途径有了更全面的了解,而不是对人类的了解.与单层培养物相比,三维(3D)原代胰岛和假胰岛提供了增强生理相关性的优势,但是这些方法仅限于在低通量实验中使用。新兴方法,例如高通量3D胰岛成像与机器学习相结合,旨在提高将3D显微组织结构整合到高通量筛选中的可行性。这篇综述探讨了目前用于高通量筛选β细胞质量和功能的小分子调节剂的方法。糖尿病药物发现的潜在关键策略。
    The progression of type II diabetes (T2D) is characterized by a complex and highly variable loss of beta-cell mass, resulting in impaired insulin secretion. Many T2D drug discovery efforts aimed at discovering molecules that can protect or restore beta-cell mass and function have been developed using limited beta-cell lines and primary rodent/human pancreatic islets. Various high-throughput screening methods have been used in the context of drug discovery, including luciferase-based reporter assays, glucose-stimulated insulin secretion, and high-content screening. In this context, a cornerstone of small molecule discovery has been the use of immortalized rodent beta-cell lines. Although insightful, this usage has led to a more comprehensive understanding of rodent beta-cell proliferation pathways rather than their human counterparts. Advantages gained in enhanced physiological relevance are offered by three-dimensional (3D) primary islets and pseudoislets in contrast to monolayer cultures, but these approaches have been limited to use in low-throughput experiments. Emerging methods, such as high-throughput 3D islet imaging coupled with machine learning, aim to increase the feasibility of integrating 3D microtissue structures into high-throughput screening. This review explores the current methods used in high-throughput screening for small molecule modulators of beta-cell mass and function, a potentially pivotal strategy for diabetes drug discovery.
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  • 文章类型: Journal Article
    本章试图提供现代内分泌学的一个动态和主要分支的全面图景,即胃肠内分泌学。在过去的半个世纪中,我们对消化道内外的肠道激素生物学的维度和多样性的理解取得了惊人的进步。主要的里程碑是大脑-肠道的双重关系,即胃肠激素作为中枢和外周神经元的有效递质的综合表达;从肠内分泌细胞到脑和其他肠外靶标的激素信号传导;肠激素作为生长和生育因素的作用;以及肠激素衍生药物的新时代。因此,胃肠激素在主要代谢紊乱(糖尿病和肥胖症)中具有致病作用;在肿瘤发展中(常见癌症,肉瘤,和神经内分泌肿瘤);以及在大脑疾病(焦虑,恐慌症发作,可能还有饮食失调)。这些临床方面需要对胃肠激素进行准确的致病和诊断测量-这是临床化学/生物化学的明显责任。为了获得对当今胃肠内分泌学的必要见解,本章将首先描述在历史背景下胃肠内分泌学的进展。历史为随后描述胃肠激素的当前生物学提供了背景,及其生物医学后果-尤其是临床化学/生物化学,其具体责任是选择适当的测定和可靠的测量。
    This chapter attempts to provide an all-round picture of a dynamic and major branch of modern endocrinology, i.e. the gastrointestinal endocrinology. The advances during the last half century in our understanding of the dimensions and diversity of gut hormone biology - inside as well as outside the digestive tract - are astounding. Among major milestones are the dual brain-gut relationship, i.e. the comprehensive expression of gastrointestinal hormones as potent transmitters in central and peripheral neurons; the hormonal signaling from the enteroendocrine cells to the brain and other extraintestinal targets; the role of gut hormones as growth and fertility factors; and the new era of gut hormone-derived drugs. Accordingly, gastrointestinal hormones have pathogenetic roles in major metabolic disorders (diabetes mellitus and obesity); in tumor development (common cancers, sarcomas, and neuroendocrine tumors); and in cerebral diseases (anxiety, panic attacks, and probably eating disorders). Such clinical aspects require accurate pathogenetic and diagnostic measurements of gastrointestinal hormones - an obvious responsibility for clinical chemistry/biochemistry. In order to obtain a necessary insight into today\'s gastrointestinal endocrinology, the chapter will first describe the advances in gastrointestinal endocrinology in a historical context. The history provides a background for the subsequent description of the present biology of gastrointestinal hormones, and its biomedical consequences - not least for clinical chemistry/biochemistry with its specific responsibility for selection of appropriate assays and reliable measurements.
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  • 文章类型: Journal Article
    凝血酶是二次止血生物化学中的关键酶,对维持止血的稳态至关重要。与常规凝血测试(PT或aPTT)或促凝血或抗凝血因子测定(例如纤维蛋白原,因子VIII,抗凝血酶或蛋白C),凝血酶生成测定(TGA),也称为凝血酶生成测试(TGT)是一种所谓的“全局测定”,通过连续和同时测量凝血酶的形成和抑制来提供止血平衡的图片。最早描述于1950年代初,作为手动测定,已经做出努力,以标准化和自动化检测,为研究人员提供,临床实验室和制药行业的多功能工具,涵盖了广泛的临床和非临床应用。这篇综述描述了为正确运行TGA而提供的技术选项,包括对分析前和分析项目的审查,性能,解释,以及在生理学研究和药学中的应用。
    Thrombin is the pivotal enzyme in the biochemistry of secondary hemostasis crucial to maintaining homeostasis of hemostasis. In contrast to routine coagulation tests (PT or aPTT) or procoagulant or anticoagulant factor assays (e.g. fibrinogen, factor VIII, antithrombin or protein C), the thrombin generation assay (TGA), also named thrombin generation test (TGT) is a so-called \"global assay\" that provides a picture of the hemostasis balance though a continuous and simultaneous measurement of thrombin formation and inhibition. First described in the early 1950s, as a manual assay, efforts have been made in order to standardize and automate the assay to offer researchers, clinical laboratories and the pharmaceutical industry a versatile tool covering a wide range of clinical and non-clinical applications. This review describes technical options offered to properly run TGA, including a review of preanalytical and analytical items, performance, interpretation, and applications in physiology research and pharmacy.
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