Actin-binding proteins

肌动蛋白结合蛋白
  • 文章类型: Journal Article
    肌动蛋白结合蛋白的Shroom(Shrm)家族具有独特且高度保守的Apx/Shrm结构域2(ASD2)基序。shroom蛋白指导Rho相关激酶(ROCK)的亚细胞定位,通过磷酸化和激活非肌肉肌球蛋白II的能力重塑肌动球蛋白细胞骨架并改变细胞形态。因此,Shrm-ROCK复合体对细胞形状和许多组织的发育至关重要,包括神经管,眼睛,肠子,心,和脉管系统。重要的是,Shrm蛋白的结构和表达也与神经管缺陷有关,慢性肾病,癌转移,和X-link智力迟钝.因此,更好地了解Shrm介导的信号转导通路对于开发新的治疗策略以最大程度地减少导致异常Shrm蛋白的损伤至关重要.本文对各种Shrm蛋白及其在形态发生和疾病中的作用进行了全面综述。
    The Shroom (Shrm) family of actin-binding proteins has a unique and highly conserved Apx/Shrm Domain 2 (ASD2) motif. Shroom protein directs the subcellular localization of Rho-associated kinase (ROCK), which remodels the actomyosin cytoskeleton and changes cellular morphology via its ability to phosphorylate and activate non-muscle myosin II. Therefore, the Shrm-ROCK complex is critical for the cellular shape and the development of many tissues, including the neural tube, eye, intestines, heart, and vasculature system. Importantly, the structure and expression of Shrm proteins are also associated with neural tube defects, chronic kidney disease, metastasis of carcinoma, and X-link mental retardation. Therefore, a better understanding of Shrm-mediated signaling transduction pathways is essential for the development of new therapeutic strategies to minimize damage resulting in abnormal Shrm proteins. This paper provides a comprehensive overview of the various Shrm proteins and their roles in morphogenesis and disease.
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  • 文章类型: Journal Article
    肌动蛋白存在于每个真核细胞的细胞质和细胞核中。在细胞质中,肌动蛋白的框架和运动功能与其聚合形成F-肌动蛋白的能力有关。在细胞核中,球状肌动蛋白发挥着重要的功能作用。对于球状蛋白质,肌动蛋白具有与其相互作用的独特的大量蛋白质。肌动蛋白相互作用组的生物信息学分析表明,只有一部分肌动蛋白结合蛋白既是细胞质又是细胞核。有些蛋白质只与细胞质相互作用,或仅与核肌动蛋白。第一个池包括与地层相关的蛋白质,regulation,肌动蛋白细胞骨架的功能占主导地位,虽然核肌动蛋白结合蛋白参与了大多数关键的核过程,从转录调节到DNA损伤反应。对肌动蛋白结合蛋白结构的生物信息学分析表明,这些蛋白主要是内在无序的蛋白质,其中许多是无膜细胞器的一部分。有趣的是,尽管细胞核中内在紊乱的肌动蛋白结合蛋白的数量大于细胞质中的数量,细胞质中无膜细胞器形成的驱动因素显着(四倍)大于细胞核。
    Actin is present in the cytoplasm and nucleus of every eukaryotic cell. In the cytoplasm, framework and motor functions of actin are associated with its ability to polymerize to form F-actin. In the nucleus, globular actin plays a significant functional role. For a globular protein, actin has a uniquely large number of proteins with which it interacts. Bioinformatics analysis of the actin interactome showed that only a part of actin-binding proteins are both cytoplasmic and nuclear. There are proteins that interact only with cytoplasmic, or only with nuclear actin. The first pool includes proteins associated with the formation, regulation, and functioning of the actin cytoskeleton predominate, while nuclear actin-binding proteins are involved in the majority of key nuclear processes, from regulation of transcription to DNA damage response. Bioinformatics analysis of the structure of actin-binding proteins showed that these are mainly intrinsically disordered proteins, many of which are part of membrane-less organelles. Interestingly, although the number of intrinsically disordered actin-binding proteins in the nucleus is greater than in the cytoplasm, the drivers for the formation of the membrane-less organelles in the cytoplasm are significantly (four times) greater than in the nucleus.
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  • 文章类型: Journal Article
    免疫显性膜蛋白(IMP)是植物血浆中普遍存在的膜蛋白,已被证实为F-肌动蛋白结合蛋白。然而,控制IMP功能的复杂分子机制需要进一步阐明。在这项研究中,确定了IMP的X射线晶体结构,并提供了其与植物肌动蛋白相互作用的见解。与其他蛋白质的比较分析表明,IMP与含talinrod结构域的蛋白1(TLNRD1)具有结构同源性,它也起着F-肌动蛋白结合蛋白的作用。随后对IMP和F-肌动蛋白的分子对接研究表明,它们具有互补表面,表明稳定的互动。IMP-F-肌动蛋白结合模型的低势能和高置信度分数表明稳定的结合。此外,通过使用免疫沉淀和质谱,发现IMP是引起叶状体1(PHYL1)的植物原效应物的相互作用伙伴。然后表明,IMP和PHYL1在花生巫术的S2阶段均高度表达。IMP和PHYL1之间的关联通过体内免疫沉淀得到证实,体外交联分析和分子对接分析。总的来说,这些发现扩展了目前对IMP相互作用的理解,增强了对IMP与植物F-肌动蛋白相互作用的理解。他们还揭示了一种新的相互作用途径,该途径可能会影响与PHYL1相关的植物浆致病性和宿主植物反应。这一发现可能为开发克服与植物质相关的植物病害的新策略铺平道路。
    Immunodominant membrane protein (IMP) is a prevalent membrane protein in phytoplasma and has been confirmed to be an F-actin-binding protein. However, the intricate molecular mechanisms that govern the function of IMP require further elucidation. In this study, the X-ray crystallographic structure of IMP was determined and insights into its interaction with plant actin are provided. A comparative analysis with other proteins demonstrates that IMP shares structural homology with talin rod domain-containing protein 1 (TLNRD1), which also functions as an F-actin-binding protein. Subsequent molecular-docking studies of IMP and F-actin reveal that they possess complementary surfaces, suggesting a stable interaction. The low potential energy and high confidence score of the IMP-F-actin binding model indicate stable binding. Additionally, by employing immunoprecipitation and mass spectrometry, it was discovered that IMP serves as an interaction partner for the phytoplasmal effector causing phyllody 1 (PHYL1). It was then shown that both IMP and PHYL1 are highly expressed in the S2 stage of peanut witches\' broom phytoplasma-infected Catharanthus roseus. The association between IMP and PHYL1 is substantiated through in vivo immunoprecipitation, an in vitro cross-linking assay and molecular-docking analysis. Collectively, these findings expand the current understanding of IMP interactions and enhance the comprehension of the interaction of IMP with plant F-actin. They also unveil a novel interaction pathway that may influence phytoplasma pathogenicity and host plant responses related to PHYL1. This discovery could pave the way for the development of new strategies to overcome phytoplasma-related plant diseases.
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  • 文章类型: Journal Article
    虽然已经确定具有特定组织和动力学的F-肌动蛋白网络受到不同组的相关肌动蛋白结合蛋白(ABP)的严格调节,ABP如何对特定的F-肌动蛋白网络进行自我排序仍不清楚。我们报道了肌动蛋白组装因子Arp2/3复合物和ForminCdc12调节裂殖酵母中ABPfimbrinFim1和原肌球蛋白Cdc8与不同F-肌动蛋白网络的关联。F-肌动蛋白网络的遗传和药理学破坏表明,Fim1优先针对Arp2/3复合物介导的肌动蛋白斑块,而Cdc8优先靶向收缩环中的形式蛋白Cdc12介导的细丝。为了研究Arp2/3复合物和形式素Cdc12介导的肌动蛋白组装的作用,我们使用四色TIRF显微镜观察了ABP分选与纯化蛋白的体外重建。单独的Fim1或Cdc8类似地与通过任一组装因子组装的细丝结合良好。然而,在既包含肌动蛋白组装因子又包含ABP的“竞争”反应中,在Arp2/3复杂分支点和ForminCdc12组装的肌动蛋白丝上积累了2.0倍的Fim1和3.5倍的Cdc8,分别。这些发现表明,F-肌动蛋白组装因子Arp2/3复合物和形式蛋白Cdc12有助于促进特定ABP的招募,从而调整ABP分选并随后在裂殖酵母中建立F-肌动蛋白网络的身份。
    While it is well-established that F-actin networks with specific organizations and dynamics are tightly regulated by distinct sets of associated actin-binding proteins (ABPs), how ABPs self-sort to particular F-actin networks remains largely unclear. We report that actin assembly factors Arp2/3 complex and formin Cdc12 tune the association of ABPs fimbrin Fim1 and tropomyosin Cdc8 to different F-actin networks in fission yeast. Genetic and pharmacological disruption of F-actin networks revealed that Fim1 is preferentially directed to Arp2/3-complex mediated actin patches, whereas Cdc8 is preferentially targeted to formin Cdc12-mediated filaments in the contractile ring. To investigate the role of Arp2/3 complex- and formin Cdc12-mediated actin assembly, we used four-color TIRF microscopy to observe the in vitro reconstitution of ABP sorting with purified proteins. Fim1 or Cdc8 alone bind similarly well to filaments assembled by either assembly factor. However, in \'competition\' reactions containing both actin assembly factors and both ABPs, ∼2.0-fold more Fim1 and ∼3.5-fold more Cdc8 accumulates on Arp2/3 complex branch points and formin Cdc12-assembled actin filaments, respectively. These findings indicate that F-actin assembly factors Arp2/3 complex and formin Cdc12 help facilitate the recruitment of specific ABPs, thereby tuning ABP sorting and subsequently establishing the identity of F-actin networks in fission yeast.
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  • 文章类型: Journal Article
    背景:转移占癌症相关死亡的大部分。肌动蛋白动力学和基于肌动蛋白的细胞迁移和侵袭是癌症转移的重要因素。转移的特征是肌动蛋白聚合和解聚,它们受到涉及大量肌动蛋白调节剂的分子变化的精确调节,包括肌动蛋白结合蛋白(ABP)和信号通路,使癌细胞从原发肿瘤扩散。对去泛素化酶(DUB)的研究揭示了它们在癌症转移过程中的肌动蛋白动力学和基于肌动蛋白的迁移和侵袭中的重要作用。
    结论:这里,我们回顾了DUB如何通过参与肌动蛋白重排和基于肌动蛋白的迁移和侵袭来驱动肿瘤转移。我们总结了与DUB相关的充分表征和必需的肌动蛋白细胞骨架信号分子,包括RhoGTPases,Src激酶,和ABPs,如cofilin和cortactin。还讨论了调节基于肌动蛋白的迁移信号通路的其他DUB。最后,我们讨论并解决与肌动蛋白动力学有关的DUB的治疗机会和持续挑战。
    BACKGROUND: Metastasis accounts for the majority of cancer-related deaths. Actin dynamics and actin-based cell migration and invasion are important factors in cancer metastasis. Metastasis is characterized by actin polymerization and depolymerization, which are precisely regulated by molecular changes involving a plethora of actin regulators, including actin-binding proteins (ABPs) and signalling pathways, that enable cancer cell dissemination from the primary tumour. Research on deubiquitinating enzymes (DUBs) has revealed their vital roles in actin dynamics and actin-based migration and invasion during cancer metastasis.
    CONCLUSIONS: Here, we review how DUBs drive tumour metastasis by participating in actin rearrangement and actin-based migration and invasion. We summarize the well-characterized and essential actin cytoskeleton signalling molecules related to DUBs, including Rho GTPases, Src kinases, and ABPs such as cofilin and cortactin. Other DUBs that modulate actin-based migration signalling pathways are also discussed. Finally, we discuss and address therapeutic opportunities and ongoing challenges related to DUBs with respect to actin dynamics.
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  • 文章类型: Journal Article
    核质内的离子环境可能与细胞质中的条件不同,可能在细胞应激反应中发挥作用。因此,可以想象,核肌动蛋白和肌动蛋白结合蛋白(ABP)与凋亡因子的相互作用可能在核质和细胞质中有所不同。主要的细胞内应激反应是Ca2+内流。连接介导和调节Y蛋白(JMY)是一种肌动蛋白结合蛋白,具有以Ca2依赖性方式与凋亡因子p53相互作用的能力,形成在细胞骨架重塑和运动中起调节作用的复合物。在细胞质和核质中都观察到JMY的存在。这里,我们显示,接受JMY蛋白电穿孔的离体宫颈鳞状细胞表现出不同的形态学改变。具体来说,高度分化的浅层和中间细胞显示出减少的细胞核大小。在发炎的样本中,可以观察到细胞核扩大和同时的细胞质减少,并显示出凋亡过程的迹象。相比之下,分化程度较低的副基底细胞和化生细胞显示细胞质活性增加和膜突起的形成。令人惊讶的是,在严重的炎症中,阴道病或ASC-US(意义不明的非典型鳞状细胞),JMY似乎只影响分化细胞的细胞核和核周不规则性,电穿孔后仍然存在细胞质异常。我们的观察结果可以为探索上皮细胞的细胞病理学相关形态变化与ABPs功能之间的关系提供适当的基础。这是特别重要的,因为ABP被认为是癌症和慢性炎症的潜在诊断和治疗生物标志物。
    The ionic environment within the nucleoplasm might diverge from the conditions found in the cytoplasm, potentially playing a role in the cellular stress response. As a result, it is conceivable that interactions of nuclear actin and actin-binding proteins (ABPs) with apoptosis factors may differ in the nucleoplasm and cytoplasm. The primary intracellular stress response is Ca2+ influx. The junctional mediating and regulating Y protein (JMY) is an actin-binding protein and has the capability to interact with the apoptosis factor p53 in a Ca2+-dependent manner, forming complexes that play a regulatory role in cytoskeletal remodelling and motility. JMY\'s presence is observed in both the cytoplasm and nucleoplasm. Here, we show that ex vivo ectocervical squamous cells subjected to electroporation with JMY protein exhibited varying morphological alterations. Specifically, the highly differentiated superficial and intermediate cells displayed reduced nuclear size. In inflamed samples, nuclear enlargement and simultaneous cytoplasmic reduction were observable and showed signs of apoptotic processes. In contrast, the less differentiated parabasal and metaplastic cells showed increased cytoplasmic activity and the formation of membrane protrusions. Surprisingly, in severe inflammation, vaginosis or ASC-US (Atypical Squamous Cells of Undetermined Significance), JMY appears to influence only the nuclear and perinuclear irregularities of differentiated cells, and cytoplasmic abnormalities still existed after the electroporation. Our observations can provide an appropriate basis for the exploration of the relationship between cytopathologically relevant morphological changes of epithelial cells and the function of ABPs. This is particularly important since ABPs are considered potential diagnostic and therapeutic biomarkers for both cancers and chronic inflammation.
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  • 文章类型: Editorial
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  • 文章类型: Journal Article
    维持骨骼肌的数量和质量对于确保身体的各种重要功能至关重要。肌肉稳态受多种细胞骨架蛋白和肌源性转录程序调节,对影响细胞结构和功能的内源性和外源性信号作出反应。由于肌动蛋白是细胞骨架动力学的重要组成部分,肌动蛋白结合蛋白(ABP)已被认为是骨骼肌健康和疾病的关键参与者。因此,ABP的失调导致以质量损失为特征的肌肉萎缩,力量,质量,和再生能力。这篇综合综述总结了最近的研究,这些研究揭示了ABP在肌动蛋白细胞骨架动力学中的作用,特别关注骨骼肌发生和疾病。这为通过ABP调节骨骼肌生成的分子机制以及确定潜在治疗靶标的研究途径提供了见解。此外,这篇综述基于ncRNA研究的最新成果,探讨了靶向ABP的非编码RNA(ncRNA)在骨骼肌发生和疾病中的意义。这里提出的研究将增强我们对ABP的功能意义和机械转导衍生的肌源性调节机制的理解。此外,揭示ncRNAs如何调节ABP将允许开发针对骨骼肌疾病的多种治疗方法。
    Maintenance of skeletal muscle quantity and quality is essential to ensure various vital functions of the body. Muscle homeostasis is regulated by multiple cytoskeletal proteins and myogenic transcriptional programs responding to endogenous and exogenous signals influencing cell structure and function. Since actin is an essential component in cytoskeleton dynamics, actin-binding proteins (ABPs) have been recognized as crucial players in skeletal muscle health and diseases. Hence, dysregulation of ABPs leads to muscle atrophy characterized by loss of mass, strength, quality, and capacity for regeneration. This comprehensive review summarizes the recent studies that have unveiled the role of ABPs in actin cytoskeletal dynamics, with a particular focus on skeletal myogenesis and diseases. This provides insight into the molecular mechanisms that regulate skeletal myogenesis via ABPs as well as research avenues to identify potential therapeutic targets. Moreover, this review explores the implications of non-coding RNAs (ncRNAs) targeting ABPs in skeletal myogenesis and disorders based on recent achievements in ncRNA research. The studies presented here will enhance our understanding of the functional significance of ABPs and mechanotransduction-derived myogenic regulatory mechanisms. Furthermore, revealing how ncRNAs regulate ABPs will allow diverse therapeutic approaches for skeletal muscle disorders to be developed.
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  • 文章类型: Journal Article
    原肌球蛋白通常被称为调节肌动球蛋白相互作用和肌动蛋白丝稳定性的肌动蛋白结合蛋白。在后生动物中,表达多个原肌球蛋白亚型,其中一些参与以同工型特异性方式产生肌动蛋白细胞骨架亚群。然而,许多原肌球蛋白亚型的功能仍然未知。这里,我们报告了在秀丽隐杆线虫原肌球蛋白基因中鉴定出一个新的可变外显子,以及可变剪接对原肌球蛋白同工型特性的影响。先前的研究已经报道了由秀丽隐杆线虫lev-11原肌球蛋白基因编码的六种原肌球蛋白同工型。我们确定了第七种亚型,LEV-11U,包含一个新颖的替代外显子,外显子7c(E7c)。LEV-11U是一种低分子量原肌球蛋白亚型,仅在外显子7编码区域与LEV-11T不同。计算机分析表明,E7c编码的肽序列不利于卷曲螺旋的形成,并且在静电表面电势模式上与其他原肌球蛋白同工型不同。体外,LEV-11U与肌动蛋白丝结合不良,而LEV-11T以可饱和的方式与肌动蛋白丝结合。当这些亚型在秀丽隐杆线虫横纹肌中转基因表达时,LEV-11U存在于弥漫性细胞质中,倾向于形成聚集体,而LEV-11T与肌节肌动蛋白丝共同定位。E7c中具有突变的蠕虫显示出降低的运动性和育苗大小,这表明这个外显子对最佳健康很重要。这些结果表明,单个外显子的可变剪接可以产生生化上分歧的原肌球蛋白同工型,并表明肌动蛋白亲和力差的原肌球蛋白同工型具有新的生物学功能。
    Tropomyosin is generally known as an actin-binding protein that regulates actomyosin interaction and actin filament stability. In metazoans, multiple tropomyosin isoforms are expressed, and some of them are involved in generating subpopulations of actin cytoskeleton in an isoform-specific manner. However, functions of many tropomyosin isoforms remain unknown. Here, we report identification of a novel alternative exon in the Caenorhabditis elegans tropomyosin gene and characterization of the effects of alternative splicing on the properties of tropomyosin isoforms. Previous studies have reported six tropomyosin isoforms encoded by the C. elegans lev-11 tropomyosin gene. We identified a seventh isoform, LEV-11U, that contained a novel alternative exon, exon 7c (E7c). LEV-11U is a low-molecular-weight tropomyosin isoform that differs from LEV-11T only at the exon 7-encoded region. In silico analyses indicated that the E7c-encoded peptide sequence was unfavorable for coiled-coil formation and distinct from other tropomyosin isoforms in the pattern of electrostatic surface potentials. In vitro, LEV-11U bound poorly to actin filaments, whereas LEV-11T bound to actin filaments in a saturable manner. When these isoforms were transgenically expressed in the C. elegans striated muscle, LEV-11U was present in the diffuse cytoplasm with tendency to form aggregates, whereas LEV-11T co-localized with sarcomeric actin filaments. Worms with a mutation in E7c showed reduced motility and brood size, suggesting that this exon is important for the optimal health. These results indicate that alternative splicing of a single exon can produce biochemically diverged tropomyosin isoforms and suggest that a tropomyosin isoform with poor actin affinity has a novel biological function.
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  • 文章类型: Journal Article
    循环肿瘤细胞(CTCs)在肿瘤转移中发挥重要作用,这与死亡风险增加呈正相关。肌动蛋白结合蛋白,包括cofilin(CFL1),profilin1(PFN1),和腺苷酸环化酶相关蛋白1(CAP1),被认为与肿瘤细胞运动和转移有关,特别是在头颈部鳞状细胞癌(HNSCC)。然而,目前,目前尚无关于CFL1,PFN1和CAP1在CTC和HNSCC患者白细胞中的发表研究.我们评估了31例HNSCC患者(T1-4N0-2M0)血液中CFL1,PFN1和CAP1的血清水平以及包含这些蛋白质的CTC和白细胞的数量。分析使用流式细胞术和酶联免疫吸附测定试剂盒。我们发现CAP1+CTC和CAP1+白细胞亚群在这些HNSCC患者样本中普遍存在,而CFL1+和PFN1+CTC的患病率相对较低。T2-4N1-2M0期患者有CFL1+和PFN1+CTC,PFN1血清水平升高,与T1-3N0M0组比拟。总之,PFN1血清水平和PFN1+CD326+CTC的相对数量可能是HNSCC转移的有价值的预后标志物。当前的研究是第一个获得有关CTC中肌动蛋白结合蛋白(ABP)含量的数据,和HNSCC患者血液中的白细胞。这也是初次考核CTCs亚群数目与疾病特点之间的关系。
    Circulating tumor cells (CTCs) play an important role in tumor metastases, which is positively correlated with an increased risk of death. Actin-binding proteins, including cofilin (CFL1), profilin 1 (PFN1), and adenylate cyclase-associated protein 1 (CAP1), are thought to be involved in tumor cell motility and metastasis, specifically in head and neck squamous cell carcinoma (HNSCC). However, currently, there are no published studies on CFL1, PFN1, and CAP1 in CTCs and leukocytes in HNSCC patients. We assessed serum levels of CFL1, PFN1, and CAP1 and the number of CTCs and leukocytes containing these proteins in blood from 31 HNSCC patients (T1-4N0-2M0). The analysis used flow cytometry and an enzyme-linked immunosorbent assay kit. We found that CAP1 + CTCs and CAP1 + leukocyte subpopulations were prevalent in these HNSCC patient samples, while the prevalence rates of CFL1 + and PFN1 + CTCs were relatively low. Patients with stage T2-4N1-2M0 had CFL1 + and PFN1 + CTCs with an elevated PFN1 serum level, compared with the T1-3N0M0 group. In summary, the PFN1 serum level and the relative number of PFN1 +CD326 + CTCs could be valuable prognostic markers for HNSCC metastases. The current study is the first to obtain data regarding the contents of actin-binding proteins (ABPs) in CTCs, and leukocytes in blood from HNSCC patients. This is also the first to assess the relationship between the number of CTCs subgroups and disease characteristics.
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