α-amino acids

α - 氨基酸
  • 文章类型: Journal Article
    对氘标记的氨基酸和衍生物的不断增长的需求增加了对游离氨基酸的直接氢/氘交换反应的兴趣。现有方法,包括生物催化和金属催化,通常需要昂贵的氘源或过量使用氘试剂,并且经常需要位点选择性。相比之下,我们开创性的二元催化系统,在廉价的D2O存在下以最小的化学计量量使用苯甲醛和Cs2CO3,在不需要极性非质子溶剂DMSO中的保护基团的情况下,促进在氨基酸的α-位处的有效氢/氘交换。该方法与大多数天然和非天然α-氨基酸及其衍生物高度兼容,甚至那些具有潜在反应性官能团的。这种进步不仅解决了现有方法的成本和效率问题,而且显着扩大了氘标记在生化研究中的适用性和准确性。
    The increasing demand for deuterium-labeled amino acids and derivatives has heightened interest in direct hydrogen/deuterium exchange reactions of free amino acids. Existing methods, including biocatalysis and metal catalysis, typically require expensive deuterium sources or excessive use of deuterium reagents and often struggle with site selectivity. In contrast, our pioneering binary catalysis system, employing benzaldehyde and Cs2CO3 in the presence of inexpensive D2O with minimal stoichiometric quantities, facilitates efficient hydrogen/deuterium exchange at the α-position of amino acids without the need for protecting groups in the polar aprotic solvent DMSO. The process is highly compatible with most natural and non-natural α-amino acids and derivatives, even those with potentially reactive functionalities. This advancement not only addresses the cost and efficiency concerns of existing methods but also significantly broadens the applicability and precision of deuterium labeling in biochemical research.
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  • 文章类型: Journal Article
    在这里,我们提出了一种基于氧化钨(VI)(WO3)纳米胶体颗粒对α-氨基酸(AA)分子的表面增强光致变色现象的比色检测方法,包括L-天冬氨酸(Asp),L-谷氨酸(Glu),L-组氨酸(His),L-异亮氨酸(Ile),L-亮氨酸(Leu),L-赖氨酸(Lys),L-苯丙氨酸(Phe),和L-缬氨酸(Val)。使用UV-Vis吸收光谱法研究了AA/WO3二元水体系中UV诱导的光致变色现象。已使用吸附等温线分析和衰减全反射傅里叶变换红外(ATR-FTIR)光谱相结合确定了WO3纳米胶体颗粒表面上AA分子的吸附性能。WO3纳米胶体颗粒表面吸附的AAs浓度与相应紫外线辐照的WO3胶体水溶液中的初始光致变色着色速率之间具有良好的线性相关关系,超过三个数量级,表明WO3纳米胶体颗粒的表面增强光致变色现象可用于检测AA分子。此外,根据紫外-可见吸收的结果,ATR-FTIR,和吸附等温线分析,我们已经通过实验证明了具有内球吸附Ile的AA/WO3二元水相体系,Leu,Lys,或Val分子在WO3纳米胶体颗粒的表面表现出更显著的表面增强光致变色现象比具有外球吸附Asp的系统,Glu,他的,或Phe分子。AA分子的强内球吸附成功地提高了检测限。这项研究为基于WO3纳米胶体探针的表面增强光致变色现象的“无标记”比色测定系统提供了有价值的见解。
    Herein, we present a colorimetric detection method based on the surface-enhanced photochromic phenomenon of tungsten (VI) oxide (WO3) nanocolloid particles for α-amino acid (AA) molecules, including L-aspartic acid (Asp), L-glutamic acid (Glu), L-histidine (His), L-isoleucine (Ile), L-leucine (Leu), L-lysine (Lys), L-phenylalanine (Phe), and L-valine (Val). The UV-induced photochromic phenomena in the AA/WO3 binary aqueous systems were investigated using UV-Vis absorption spectrometry. The adsorption properties of the AA molecules on the surface of the WO3 nanocolloid particles have been identified using a combination of adsorption isotherm analysis and attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy. A good linear correlation between the concentration of the AAs adsorbed on the surface of the WO3 nanocolloid particles and the initial photochromic coloration rate in the corresponding UV-irradiated WO3 colloidal aqueous solution was obtained with over three orders of magnitude, indicating that the surface-enhanced photochromic phenomenon of the WO3 nanocolloid particle can be used to detect the AA molecules. In addition, based on the results of the UV-Vis absorption, ATR-FTIR, and adsorption isotherm analyses, we have experimentally demonstrated that the AA/WO3 binary aqueous system with inner-sphere adsorbed Ile, Leu, Lys, or Val molecules on the surface of the WO3 nanocolloid particles exhibits a more significant surface-enhanced photochromic phenomenon than the system with outer-sphere adsorbed Asp, Glu, His, or Phe molecules. The strong inner-sphere adsorption of the AA molecules successfully improved the limit of detection. This study provides valuable insights into a \"label-free\" colorimetric assay system based on the surface-enhanced photochromic phenomenon of the WO3 nanocolloid probe.
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  • 文章类型: Journal Article
    已实现了通过不对称双金属中继催化通过钌催化的不对称借氢反应与铜催化的不对称迈克尔加成合并而实现的原子和逐步经济的氧化还原中性级联反应。已经以高产率制备了具有优异的对映和非对映选择性的各种具有1,4-非相邻立体中心的高度官能化的2-氨基-5-羟基戊酸酯或肽。通过仔细调整反应条件,对Ru催化剂进行明智的选择和合理的修饰在立体选择性控制以及减弱不期望的α-差向异构化中起着关键作用,从而实现了所有四种立体异构体的完全互补,否则在以前的工作中是无法获得的。生物学重要手性分子的关键中间体的简明不对称立体发散合成进一步展示了该方法的合成效用。
    An atom- and step-economical and redox-neutral cascade reaction enabled by asymmetric bimetallic relay catalysis by merging a ruthenium-catalyzed asymmetric borrowing-hydrogen reaction with copper-catalyzed asymmetric Michael addition has been realized. A variety of highly functionalized 2-amino-5-hydroxyvaleric acid esters or peptides bearing 1,4-non-adjacent stereogenic centers have been prepared in high yields with excellent enantio- and diastereoselectivity. Judicious selection and rational modification of the Ru catalysts with careful tuning of the reaction conditions played a pivotal role in stereoselectivity control as well as attenuating undesired α-epimerization, thus enabling a full complement of all four stereoisomers that were otherwise inaccessible in previous work. Concise asymmetric stereodivergent synthesis of the key intermediates for biologically important chiral molecules further showcases the synthetic utility of this methodology.
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  • 文章类型: Journal Article
    邻苯二胺对合成和生物学性质有价值。合成了新的乙酰胺3(a-c)和4(a-c),并将其表征为新型N-氨基卤化物5(a-c)和6(a-c)的前体。4a的结构,5(a-b),和6(a-b)通过单晶X射线证实。对接研究确定了具有有利的吉布斯自由能值的化合物,用于结合组蛋白脱乙酰酶8(HDAC8),一种靶向抗癌药物开发的酶。这些化合物与HDAC8的正构和变构袋结合,类似于曲古抑菌素A(TSA),HDAC8抑制剂。图6(a-c)含有羟基乙酰胺部分作为锌结合基团,邻苯二甲酰亚胺部分作为封端基团,和氨基乙酰胺部分作为连接基团,这对配体-受体结合很重要。ΔG值表明化合物5b,6b,与TSA相比,6c对变构口袋中的HDAC8具有更高的亲和力。对HDAC8的抑制活性的体外评估显示,化合物3(a-c)和5(a-c)显示出相似的抑制作用(IC50),范围为0.445至0.751μM。化合物6(a-c)具有较好的亲和力,其中6a(IC50=28nM)和6b(IC50=0.18μM)显示出略低于TSA(IC50=26nM)的有效抑制作用。这些发现表明,所研究的化合物有望成为进一步生物学研究的潜在候选者。
    Phthalimides are valuable for synthesis and biological properties. New acetamides 3(a-c) and 4(a-c) were synthesized and characterized as precursors for novel N-aminophalimides 5(a-c) and 6(a-c). Structures of 4a, 5(a-b), and 6(a-b) were confirmed by single crystal X-ray. Docking studies identified compounds with favorable Gibbs free energy values for binding to histone deacetylase 8 (HDAC8), an enzyme targeted for anticancer drug development. These compounds bound to both the orthosteric and allosteric pockets of HDAC8, similar to Trichostatin A (TSA), an HDAC8 inhibitor. 6(a-c) contain hydroxyacetamide moiety as a zinc-binding group, a phthalimide moiety as a capping group, and aminoacetamide moiety as a linker group, which are important for ligand-receptor binding. ΔG values indicated that compounds 5b, 6b, and 6c had higher affinity for HDAC8 in the allosteric pocket compared to TSA. In vitro evaluation of inhibitory activities on HDAC8 revealed that compounds 3(a-c) and 5(a-c) showed similar inhibitory effects (IC50 ) ranging from 0.445 to 0.751 μM. Compounds 6(a-c) showed better affinity, with 6a (IC50  = 28 nM) and 6b (IC50  = 0.18 μM) showing potent inhibitory effects slightly lower than TSA (IC50  = 26 nM). These findings suggest that the studied compounds hold promise as potential candidates for further biological investigations.
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  • 文章类型: Journal Article
    由于缺乏氨基糖与老化,人们将患有各种被世界卫生组织称为“不死癌症”的流行性骨病。骨组织工程中尚未完全解决的关键问题是修复严重的大规模骨和软骨缺损。细胞外基质的手性对骨细胞的生理活动和骨组织的发生起着决定性的作用,但手性调节细胞粘附和生长的机制仍处于早期探索阶段。本文综述了基于“软”和“硬”支架的手性仿生支架在骨缺损修复中的应用进展。目的总结不同手性结构(l形和d形)在诱导仿生支架修复骨缺损过程中的作用。此外,还介绍了制备手性诱导仿生支架的许多技术和方法以及值得特别考虑的问题。期望这项工作可以为设计新型手性诱导仿生支架提供鼓舞人心的思路,并促进手性在骨组织工程中的发展。
    Due to lack of amino sugar with aging, people will suffer from various epidemic bone diseases called \"undead cancer\" by the World Health Organization. The key problem in bone tissue engineering that is not completely resolved is the repair of critical large-scale bone and cartilage defects. The chirality of the extracellular matrix plays a decisive role in the physiological activity of bone cells and the occurrence of bone tissue, but the mechanism of chirality in regulating cell adhesion and growth is still in the early stage of exploration. The application progress of chirality-induced bionic scaffolds is reviewed here in bone defects repair based on \"soft\" and \"hard\" scaffolds. The aim is to summarize the effects of different chiral structures (l-shaped and d-shaped) in the process of inducing bionic scaffolds in bone defects repair. In addition, many technologies and methods as well as issues worthy of special consideration for preparing chirality-induced bionic scaffolds are also introduced. It is expected that this work can provide inspiring ideas for designing new chirality-induced bionic scaffolds and promote the development of chirality in bone tissue engineering.
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  • 文章类型: Journal Article
    α-Amino acids and α-keto acids are versatile building blocks for the synthesis of several commercially valuable products in the food, agricultural, and pharmaceutical industries. In this study, a novel transamination-like reaction catalyzed by leucine dehydrogenase was successfully constructed for the efficient enzymatic co-synthesis of α-amino acids and α-keto acids. In this reaction mode, the α-keto acid substrate was reduced and the α-amino acid substrate was oxidized simultaneously by the enzyme, without the need for an additional coenzyme regeneration system. The thermodynamically unfavorable oxidation reaction was driven by the reduction reaction. The efficiency of the biocatalytic reaction was evaluated using 12 different substrate combinations, and a significant variation was observed in substrate conversion, which was subsequently explained by the differences in enzyme kinetics parameters. The reaction with the selected model substrates 2-oxobutanoic acid and L-leucine reached 90.3% conversion with a high total turnover number of 9.0 × 106 under the optimal reaction conditions. Furthermore, complete conversion was achieved by adjusting the ratio of addition of the two substrates. The constructed reaction mode can be applied to other amino acid dehydrogenases in future studies to synthesize a wider range of valuable products.
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  • 文章类型: Journal Article
    In this paper, bioinspired polyamidoamines (PAAs) were synthesized from N,N\'-methylenebisacrylamide and nine natural α-amino acids: L-alanine, L-valine, L-leucine (M-LEU), L-histidine, L-serine, L-asparagine, L-glutamine (M-GLN), L-aspartic acid and L-glutamic acid (M-GLU) and their performance as flame retardants (FRs) for cotton were determined. The aim was to ascertain if the ability to protect cotton from fire by the process of intumescing, previously found for the glycine-derived M-GLY, was a general feature of α-amino acid-derived PAAs. None of the PAAs ignited by flame impingement, apart from M-LEU, which burned for a few seconds leaving 93% of residue. All of them formed carbon- and oxygen-rich, porous chars with a graphitic structure in the air at 350 °C, as revealed by X-ray photoelectron spectroscopy. All samples were tested as FRs for cotton by horizontal flame spread tests. At a 5% add-on, M-GLU and M-GLN extinguished the flame. The same results were obtained with all the other PAAs at a 7% add-on. The α-amino acid residues influenced the FR performance. The most effective were those that, by heating, were most suitable for producing thermally stable cyclic aromatic structures. All PAA-treated cotton samples, even when burning, left significant residues, which, according to scanning electron microscopy analysis, maintained the original cotton texture.
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  • 文章类型: Journal Article
    蛋白质和肽,由精确定义的氨基酸序列构建而成,是一类重要的生物分子,在大多数生物功能中起着至关重要的作用。通过天然的功能化制备纳米结构,具有合成聚合物的亲水性蛋白质/肽或在全合成两亲性共聚物(O)和含氨基酸的聚合物的自组装后,能够获得具有优异物理化学性质和巨大生物相关范围的新型蛋白质模拟生物材料。近年来,聚合诱导的自组装(PISA)已被确立为一种有效和通用的替代方法,以现有的自组装程序,用于在高浓度下原位可重复开发嵌段共聚物纳米物体,因此,为工程蛋白质启发的纳米材料提供了一个理想的平台。在这篇评论文章中,用于直接构建蛋白质的不同策略-,(聚)肽-,和通过PISA的基于氨基酸的纳米结构进行了描述,特别关注开发的嵌段共聚物组件的特性,以及它们在各种制药和生物医学应用中的应用。
    Proteins and peptides, built from precisely defined amino acid sequences, are an important class of biomolecules that play a vital role in most biological functions. Preparation of nanostructures through functionalization of natural, hydrophilic proteins/peptides with synthetic polymers or upon self-assembly of all-synthetic amphiphilic copolypept(o)ides and amino acid-containing polymers enables access to novel protein-mimicking biomaterials with superior physicochemical properties and immense biorelevant scope. In recent years, polymerization-induced self-assembly (PISA) has been established as an efficient and versatile alternative method to existing self-assembly procedures for the reproducible development of block copolymer nano-objects in situ at high concentrations and, thus, provides an ideal platform for engineering protein-inspired nanomaterials. In this review article, the different strategies employed for direct construction of protein-, (poly)peptide-, and amino acid-based nanostructures via PISA are described with particular focus on the characteristics of the developed block copolymer assemblies, as well as their utilization in various pharmaceutical and biomedical applications.
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  • 文章类型: Journal Article
    We have developed a highly efficient and practical approach for palladium-catalyzed trifluoroacetate-promoted N-quinolylcarboxamide-directed glycosylation of inert β-C(sp3 )-H bonds of N-phthaloyl α-amino acids with glycals under mild conditions. For the first time, C(sp3 )-H activation for glycosylation was achieved to build C-alkyl glycosides. This method facilitates the synthesis of various β-substituted C-alkyl glycoamino acids and offers a tool for glycopeptide synthesis.
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  • 文章类型: Journal Article
    The first asymmetric synthesis of tetrasubstituted α-amino allenoates by a chiral phosphoric acid catalyzed dearomative γ-addition reaction of 2,3-disubstituted indoles to β,γ-alkynyl-α-imino esters is reported. This method provides access to a series of highly functionalized tetrasubstituted allenes featuring quaternary stereocenters in high yields, and with excellent regio-, diastereo-, and enantioselectivities under mild conditions without by-product formation. Representative large-scale reactions and diverse transformations of the products into various scaffolds with potential biological activities render are also disclosed. The mechanism of the reaction was elucidated by control reactions and DFT calculations.
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